Seed bio-priming with phosphate solubilizing bacteria strains to improve rice (Oryza sativa L. var. FARO 44) growth under ferruginous ultisol conditions

Growth Properties ◽

Rice Seeds ◽

The research investigated the possibility of phosphate solubilizing bacteria (PSB) with plant growthpromoting (PGP) capabilities to improve growth properties of rice plant under ferruginous ultisol (FU) condition through bio-priming strategy. The PSB with PGP properties used in this research were Bacillus cereus strain GGBSU-1, Proteus mirabilis strain TL14-1 and Klebsiella variicola strain AUH-KAM-9 that were previously isolated and characterized following the 16S rRNA gene sequencing. Biosafety analysis of the PSB isolates was conducted using blood agar. The rice seeds were then bio-primed with the PSBs at 3, 12 and 24 hours priming durations and then sown in a composite FU soil sample. Differences in germination bioassay involving SEM, morphology, physiology and biomass parameters were investigated for 15 weeks after bio-priming. The composite FU soil used in the study had high pH, low bioavailable phosphorus, low water holding capacity and high iron levels which has led to a low growth properties of rice seeds without bio-priming in FU soil. Germination parameters was better in seeds bio-primed with the PSBs, especially at 12h priming duration as against seeds without priming. SEM showed more bacterial colonization in the PSB bioprimed seeds. Seed bio-priming of rice seed with Bacillus cereus strain GGBSU-1, Proteus mirabilis strain TL14-1 and Klebsiella variicola strain AUH-KAM-9 under FU soil condition significantly improved seed microbiome, rhizocolonization and soil nutrient properties, thereby enhancing growth properties of the rice plant. This suggest the ability of PSB to solubilize and mineralize soil phosphate and improve its availability and soil property for optimum plant usage in phosphate stressed and iron toxic soils.

Rhizo-inoculation of phosphate solubilizing bacteria strains to improve rice (Oryza sativa L. var. FARO 44) growth under ferruginous ultisol conditions.

10.21203/rs.3.rs-1033942/v1 ◽

2021 ◽

Author(s):

Musa Saheed Ibrahim ◽

Beckley Ikhajiagbe

Keyword(s):

Plant Growth ◽

Bacillus Cereus ◽

Proteus Mirabilis ◽

Rice Plant ◽

Rice Seedling ◽

Rrna Gene ◽

Growth Properties ◽

Rice Seeds ◽

Abstract Background The research investigated the possibility of phosphate solubilizing bacteria (PSB) with plant growth-promoting (PGP) capabilities to improve growth properties of rice plant under ferruginous ultisol (FU) condition through rhizo-inoculation strategy. The PSB with PGP properties used in this research were Bacillus cereus strain GGBSU-1, Proteus mirabilis strain TL14-1 and Klebsiella variicola strain AUH-KAM-9 that were previously isolated and characterized following the 16S rRNA gene sequencing. The rice seeds were sown in a composite FU soil sample and a humus soil (control) and then rhizo-inoculated along the root region of the growing rice seedling at 16 days after sowing. The rice plant was studied for differences in morphological, physiological and biomass parameters for 16 weeks after rhizo-inoculation. Results The composite FU soil used in the study had high pH, low bioavailable phosphorus, low water holding capacity and high iron levels which has led to a low growth properties of rice seeds sown in FU soil without rhizo-inoculation. After rhizo-inoculation, a significant increase in morphological, biomass and physiological parameters were observed in the rice plant grown in the FU soil as against the control and the rice plant in FU soil without inoculation except for terpenoid which is usually known to signify biotic stress and as part of plant defense mechanism. Generally, Bacillus cereus strain GGBSU-1 showed higher improvement compared to other PSBs used in the present study. This is due to a more improved growth properties observed. Conclusion Rhizo-inoculation of rice seedling with Bacillus cereus strain GGBSU-1, Proteus mirabilis strain TL14-1 and Klebsiella variicola strain AUH-KAM-9 under FU soil condition significantly improved growth properties of the rice plant. This suggest the ability of PSB to solubilize and mineralize soil phosphate and improve its availability for plant use in phosphate stressed soil, thereby improving plant growth properties.

The growth response of rice (Oryza sativa L. var. FARO 44) in vitro after inoculation with bacterial isolates from a typical ferruginous ultisol

Bulletin of the National Research Centre ◽

10.1186/s42269-021-00528-8 ◽

2021 ◽

Vol 45 (1) ◽

Author(s):

Musa Saheed Ibrahim ◽

Beckley Ikhajiagbe

Keyword(s):

16S Rrna ◽

Bacillus Cereus ◽

Proteus Mirabilis ◽

Growth Response ◽

Gene Sequencing ◽

16S Rrna Gene Sequencing ◽

Rrna Gene ◽

Rice Seedlings ◽

Rrna Gene Sequencing

Abstract Background Rice forms a significant portion of food consumed in most household worldwide. Rice production has been hampered by soil factors such as ferruginousity which has limited phosphorus availability; an important mineral component for the growth and yield of rice. The presence of phosphate-solubilizing bacteria (PSB) in soils has been reported to enhance phosphate availability. In view of this, the present study employed three bacteria species (BCAC2, EMBF2 and BCAF1) that were previously isolated and proved P solubilization capacities as inocula to investigate the growth response of rice germinants in an in vitro setup. The bacteria isolates were first identified using 16S rRNA gene sequencing and then applied as inoculum. The inolula were prepared in three concentrations (10, 7.5 and 5.0 ml) following McFarland standard. Viable rice (var. FARO 44) seeds were sown in petri dishes and then inoculated with the three inocula at the different concentrations. The setup was studied for 28 days. Results 16S rRNA gene sequencing identified the isolates as: isolate BCAC2= Bacillus cereus strain GGBSU-1, isolate BCAF1= Proteus mirabilis strain TL14-1 and isolate EMBF2= Klebsiella variicola strain AUH-KAM-9. Significant improvement in rice germination, morphology, physiology and biomass parameters in the bacteria-inoculated setups was observed compared to the control. Germination percentage after 4 days was 100 % in the inoculated rice germinants compared to 65% in the control (NiS). Similarly, inoculation with the test isolates enhanced water-use efficiency by over 40%. The rice seedlings inoculated with Bacillus cereus strain GGBSU-1 (BiS) showed no signs of chlorosis and necrosis throughout the study period as against those inoculated with Proteus mirabilis strain TL14-1 (PiS) and Klebsiella variicola strain AUH-KAM-9 (KiS). Significant increase in chlorophyll-a, chlorophyll-b and alpha amylase was observed in the rice seedlings inoculated with BiS as against the NiS. Conclusion Inoculating rice seeds with Bacillus cereus strain GGBSU-1, Proteus mirabilis strain TL14-1 and Klebsiella variicola strain AUH-KAM-9 in an in vitro media significantly improved growth parameters of the test plant. Bacillus cereus strain GGBSU-1 showed higher efficiency due to a more improved growth properties observed.

Isolation and identification of phosphate solubilizing bacteria and evaluate its effect on of Mung bean (Vigna radita [L.] R.Wilczek) growth

Iraqi Journal of Science ◽

10.24996/ijs.2019.60.5.7 ◽

2019 ◽

Vol 60 (5) ◽

pp. 985-995

Author(s):

Yusur Ramzi ◽

Hutaf A. A. Alsalim

Keyword(s):

Plant Growth ◽

Bacillus Cereus ◽

Mung Bean ◽

Phosphate Solubilization ◽

Growth Promotion ◽

Hydrolytic Enzymes ◽

Biochemical Tests ◽

Isolation And Identification ◽

Sixteen soil samples were collected from wheat, barley and yellow corn rhizosphere in Abu-Ghraib, Aqraqof, Latifieh,Tarmiah, Jadriya and of Agriculture in Baghdad university/ Baghdad city. The results found nine phosphate solubilizing bacteria (PSB) isolates (Y1, Y2, Y3, Y4, Y5, Y6, Y7, Y8, Y9), formed clear zones on National Botanical Research Institute's (NBRIP) agar. The solubility index (SI) of PSB isolates ranged from 2.00 to 3.66. Y4 have the highest SI (3.66) followed by Y3 and Y6 (3.33). Phosphate solubilization abilities varying from (20.10-39.00 Î¼g.ml-1), Y4 was the highest (39.00 Î¼g.ml-1) followed by Y3 (37.00Î¼g.ml-1). The results of hydrolytic enzymes production showed that almost all nine isolates are able to produce protease and pectinase, while Y1 and Y2 showed negative results in cellulase production. Maximum ability for hydrogen cyanide (HCN) and indole acetic acid (IAA) production were showed byY3 and Y4 isolates. The isolate Y4 was found to be the most efficient isolate, so it was selected identified as Bacillus cereus using biochemical tests confirmed by VITEC 2 compact system. The results of High performance liquid chromatography (HPLC) revealed that Bacillus cereus produce oxalic acid (2.996), citric acid (9.117) and malic acid (3.734). Bacillus cereus (Y4) enhanced the growth of mung bean plants. A significant increase in branches number (12.33), plant length (83.0cm), fresh weight (27.25 g) and dry weight (1.427g) were obtained compared with control treatments. The main objective of this study is to isolate PSB and evaluate their roles in plant growth promotion. The results showed the high phosphate solubilization efficiency of PSB isolates and the identified isolates was found to be good enough for plant growth promoting.

Isolation and Characterization of Phosphate-Solubilizing Bacteria from Mushroom Residues and their Effect on Tomato Plant Growth Promotion

Polish Journal of Microbiology ◽

10.5604/17331331.1234993 ◽

2017 ◽

Vol 66 (1) ◽

pp. 57-65 ◽

Cited By ~ 19

Author(s):

Jian Zhang ◽

Peng Cheng Wang ◽

Ling Fang ◽

Qi-An Zhang ◽

Cong Sheng Yan ◽

...

Keyword(s):

Plant Growth ◽

Growth Promotion ◽

Wood Flour ◽

Dry Weight ◽

Rrna Gene ◽

Plant Growth Promoting Bacteria ◽

Sequence Comparisons ◽

Isolation And Characterization ◽

Phosphorus is a major essential macronutrient for plant growth, and most of the phosphorus in soil remains in insoluble form. Highly efficient phosphate-solubilizing bacteria can be used to increase phosphorus in the plant rhizosphere. In this study, 13 isolates were obtained from waste mushroom residues, which were composed of cotton seed hulls, corn cob, biogas residues, and wood flour. NBRIP solid medium was used for isolation according to the dissolved phosphorus halo. Eight isolates produced indole acetic acid (61.5%), and six isolates produced siderophores (46.2%). Three highest phosphate-dissolving bacterial isolates, namely, M01, M04, and M11, were evaluated for their beneficial effects on the early growth of tomato plants (Solanum lycopersicum L. Wanza 15). Strains M01, M04, and M11 significantly increased the shoot dry weight by 30.5%, 32.6%, and 26.2%, and root dry weight by 27.1%, 33.1%, and 25.6%, respectively. Based on 16S rRNA gene sequence comparisons and phylogenetic positions, strains M01 and M04 belonged to the genus Acinetobacter, and strain M11 belonged to the genus Ochrobactrum. The findings suggest that waste mushroom residues are a potential resource of plant growth-promoting bacteria exhibiting satisfactory phosphate-solubilizing for sustainable agriculture.

Secretion of Gluconic Acid From Nguyenibacter sp. L1 Is Responsible for Solubilization of Aluminum Phosphate

Frontiers in Microbiology ◽

10.3389/fmicb.2021.784025 ◽

2021 ◽

Vol 12 ◽

Author(s):

Xiao Li Li ◽

Xue Qiang Zhao ◽

Xiao Ying Dong ◽

Jian Feng Ma ◽

Ren Fang Shen

Keyword(s):

Gluconic Acid ◽

Calcareous Soils ◽

Acid Soils ◽

Aluminum Phosphate ◽

Available P ◽

Rrna Gene ◽

P Deficiency ◽

Phosphate Solubilizing ◽

Major Factors

Phosphorus (P) deficiency is one of the major factors limiting plant growth in acid soils, where most P is fixed by toxic aluminum (Al). Phosphate-solubilizing bacteria (PSBs) are important for the solubilization of fixed P in soils. Many PSBs have been isolated from neutral and calcareous soils, where calcium phosphate is the main P form, whereas PSBs in acid soils have received relatively little attention. In this study, we isolated a PSB strain from the rhizosphere of Lespedeza bicolor, a plant well adapted to acid soils. On the basis of its 16S rRNA gene sequence, this strain was identified as a Nguyenibacter species and named L1. After incubation of Nguyenibacter sp. L1 for 48 h in a culture medium containing AlPO4 as the sole P source, the concentration of available P increased from 10 to 225 mg L–1, and the pH decreased from 5.5 to 2.5. Nguyenibacter sp. L1 exhibited poor FePO4 solubilization ability. When the pH of non-PSB-inoculated medium was manually adjusted from 5.5 to 2.5, the concentration of available P only increased from 6 to 65 mg L–1, which indicates that growth medium acidification was not the main contributor to the solubilization of AlPO4 by Nguyenibacter sp. L1. In the presence of glucose, but not fructose, Nguyenibacter sp. L1 released large amounts of gluconic acid to solubilize AlPO4. Furthermore, external addition of gluconic acid enhanced AlPO4 solubilization and reduced Al toxicity to plants. We conclude that secretion of gluconic acid by Nguyenibacter sp. L1, which is dependent on glucose supply, is responsible for AlPO4 solubilization as well as the alleviation of Al phytotoxicity by this bacterial strain.

Isolation and Characterization of a Phosphate-Solubilizing Halophilic BacteriumKushneriasp. YCWA18 from Daqiao Saltern on the Coast of Yellow Sea of China

Evidence-based Complementary and Alternative Medicine ◽

10.1155/2011/615032 ◽

2011 ◽

Vol 2011 ◽

pp. 1-6 ◽

Cited By ~ 44

Author(s):

Fengling Zhu ◽

Lingyun Qu ◽

Xuguang Hong ◽

Xiuqin Sun

Keyword(s):

Liquid Medium ◽

Soil Phosphorus ◽

Halophilic Bacterium ◽

Eastern Coast ◽

Rrna Gene ◽

Phosphorus Cycle ◽

Isolation And Characterization ◽

Moderately Halophilic Bacterium ◽

Phosphate-solubilizing bacteria (PSB) function in soil phosphorus cycle, increasing the bioavailability of soil phosphorus for plants. Isolation and application of salt-tolerant or halophilic PSB will facilitate the development of saline-alkali soil-based agriculture. A moderately halophilic bacterium was isolated from the sediment of Daqiao saltern on the eastern coast of China, which also performs phosphate-solubilizing ability. The bacterium was assigned to genusKushneriaaccording to its 16S rRNA gene sequence, and accordingly named asKushneriasp. YCWA18. The fastest growth was observed when the culturing temperature was 28∘C and the concentration of NaCl was 6% (w/v). It was founds that the bacterium can survive at a concentration of NaCl up to 20%. At the optimum condition, the bacterium solubilized 283.16 μg/mL phosphorus in 11 days after being inoculated in 200 mL Ca3(PO4)2containing liquid medium, and 47.52 μg/mL phosphorus in 8 days after being inoculated in 200 mL lecithin-containing liquid medium. The growth of the bacterium was concomitant with a significant decrease of acidity of the medium.

Screening and Molecular Identification of Phosphate-Solubilizing Rhizobacteria from Mangrove Ecosystem of the Lombok Island

JURNAL BIOLOGI TROPIS ◽

10.29303/jbt.v20i3.1730 ◽

2020 ◽

Vol 20 (3) ◽

pp. 475

Author(s):

Lalu Zulkifli ◽

Prapti Sedijani ◽

Dewa Ayu Citra Rasmi ◽

Lalu Wira Zain Amrullah

Keyword(s):

Bacterial Species ◽

Rrna Gene ◽

Plant Growth Promoting Bacteria ◽

Genome Database ◽

Paenibacillus Sp ◽

Screening And Identification ◽

Phosphate Solubilizing ◽

Phosphate Solubilizing Rhizobacteria ◽

Lombok Island

Phosphate solubilizing rhizobacteria can be used as a component in biofertilizer formulations to increase local and national food production without causing adverse risks to the environment compared to the use of chemical fertilizers. In this regard, screening and identification of phosphate solubilizing bacteria from the rhizosphere of several mangrove species that grow on the coast of Lombok Island has been carried out. The method of isolation used is the Pikovskaya method. Screening and identification activities have obtained 5 isolates of mangrove rhizosphere bacteria (BRM) which are indicated by their ability to form clear zones on Pikovskaya media, namely isolates BRM1 and BRM4 (isolated from the rhizosphere of Avicennia marina), BRM2 and BRM3 (isolated from the rhizosphere of Rhizophora apicullata), BRM5 (isolated from the rhizosphere of R. stylosa). All rhizobacteria isolates were identified as Gram-positive bacteria. Molecular analysis based on the comparison of 16S rRNA gene sequences of isolates with the genome database at GenBank (NCBI) using Mega 10 software, showed that all BRM isolates occupied the same cluster as bacterial species from the Genus Paenibacillus in the dendrogram of the phylogenetic tree, namely Paenibacillus sp. JWLB1 strain, Paenibacillus sp. Strain NO13, P. cineris strain cu1-7, P. favisporus strain CHP14, with genetic distance ranging from 1.3 to 1.4. Many species of the Genus Paenibacillus are currently known to play an important roles as plant growth-promoting bacteria. The BRM isolates obtained in this study can be further developed as a biofertilizer component (inoculant) in saline and dryland agriculture.

Mineral Phosphate Solubilizing Bacteria Isolated from Various Plant Rhizosphere under Different Aluminum Content

Indonesian Journal of Biotechnology ◽

10.22146/ijbiotech.7558 ◽

2015 ◽

Vol 10 (2) ◽

Author(s):

Dolly Iriani Damarjaya ◽

Jaka Widada ◽

Keishi Senoo ◽

Masaya Nishiyama ◽

Shigeto Otsuka

Keyword(s):

Dry Weight ◽

Rrna Gene ◽

Plant Growth Promoting Bacteria ◽

Gene Sequence Analysis ◽

Mineral Phosphate ◽

Plant Growth Promoting ◽

The Media ◽

Formation Method ◽

The objectives of this study was to isolate and characterize the mineral phosphate solubilizing bacteriafrom rhizosphere and evaluate their potential as plant growth promoting bacteria in Al-toxic soils. The halozone formation method was used to isolate PSB using the media containing insoluble phosphates (Ca-P or Al-P)as a source of phosphate. Eight of acid and Al-tolerant PSB isolates that were able to solubilize Ca-P wereobtained from rhizosphere of clover, wheat, corn, and sunflower grown in Al-toxic soil. Identification of theisolates based on the 16S rRNA gene sequence analysis demonstrated that the isolates were strains of Burkholderia(5 strains), Pseudomonas (1 strain), Ralstonia (1 strain), and unidentified bacterium (1 strains). All PSB isolatesshowed the capability to dissolve Ca-P, and only 1 strain (Ralstonia strain) was able to dissolve Al-P in agar platemedium. The P-solubilization by these isolates was correlated with pH of medium. Inoculation of the bacterialstrains on clover on Al-toxic medium showed that all isolates increased the plant dry weight compared withuninoculated treatment. Our results showed that those PSB isolates have potential to be developed as a biofertilizerto increase the efficiency of P-inorganic fertilizer used in Al-toxic soils.

Phylogenetic Relationship of Phosphate Solubilizing Bacteria according to 16S rRNA Genes

BioMed Research International ◽

10.1155/2015/201379 ◽

2015 ◽

Vol 2015 ◽

pp. 1-5 ◽

Cited By ~ 4

Author(s):

Mohammad Bagher Javadi Nobandegani ◽

Halimi Mohd Saud ◽

Wong Mui Yun

Keyword(s):

16S Rrna ◽

Oil Palm ◽

Phosphorus Uptake ◽

16S Rrna Genes ◽

Rrna Genes ◽

Rrna Gene ◽

Bacterial Isolates ◽

Serratia Plymuthica ◽

Phosphate solubilizing bacteria (PSB) can convert insoluble form of phosphorous to an available form. Applications of PSB as inoculants increase the phosphorus uptake by plant in the field. In this study, isolation and precise identification of PSB were carried out in Malaysian (Serdang) oil palm field (University Putra Malaysia). Identification and phylogenetic analysis of 8 better isolates were carried out by 16S rRNA gene sequencing in which as a result five isolates belong to the Beta subdivision ofProteobacteria, one isolate was related to the Gama subdivision ofProteobacteria, and two isolates were related to theFirmicutes. Bacterial isolates of 6upmr, 2upmr, 19upmnr, 10upmr, and 24upmr were identified asAlcaligenes faecalis. Also, bacterial isolates of 20upmnr and 17upmnr were identified asBacillus cereusandVagococcus carniphilus, respectively, and bacterial isolates of 31upmr were identified asSerratia plymuthica. Molecular identification and characterization of oil palm strains as the specific phosphate solubilizer can reduce the time and cost of producing effective inoculate (biofertilizer) in an oil palm field.

Phosphate-solubilizing bacteria from safflower rhizosphere and their effect on seedling growth

Open Life Sciences ◽

10.1515/biol-2019-0028 ◽

2019 ◽

Vol 14 (1) ◽

pp. 246-254 ◽

Cited By ~ 5

Author(s):

Tingting Zhang ◽

Feng Hu ◽

Lei Ma

Keyword(s):

Seedling Growth ◽

Gene Sequence ◽

Nutrient Management ◽

Field Application ◽

Safflower Seed ◽

Rrna Gene ◽

Gene Sequence Analysis ◽

Initial Culture ◽

AbstractPhosphate-solubilizing bacteria (PSB) can convert insoluble rhizosphere phosphorus into forms that are absorbable by plants and thus enhance the growth of plants. Safflower is a cash crop that is a source of vegetable oils, food coloring and flavoring agents. This study sought to isolate PSB in safflower rhizosphere soil and investigate their effects on seedling growth. The isolated PSB were identified as belonging to the genera Pseudomonas, Sinorhizobium, Staphylococcus, Acinetobacter and Enterobacter using 16S rRNA gene sequence analysis. Acinetobacter sp RC04. showed the best performance in phosphate solubilization, with the efficiency of the process being influenced by carbon source, nitrogen source, cultivation temperature and initial culture pH. Acinetobacter sp. RC04 and Sinorhizobium sp. RC02 showed the ability to improve safflower seed germination and, when co-inoculated, improved seedling growth. Hence, we suggest that Acinetobacter sp. RC04 and Sinorhizobium sp. RC02 could be developed for field application to promote safflower growth. The results from this study will help drive novel biofertilizer discovery and could be included in integrated nutrient management regimes for safflower and other important economic crops.