scholarly journals In vivo brain activity imaging of interactively locomoting mice

2017 ◽  
Author(s):  
Shigenori Inagaki ◽  
Masakazu Agetsuma ◽  
Shinya Ohara ◽  
Toshio Iijima ◽  
Tetsuichi Wazawa ◽  
...  
Keyword(s):  
Visual Cortex ◽  
Primary Visual Cortex ◽  
Brain Activity ◽  
Field Potential ◽  
Brain Functions ◽  
Wide Range ◽  
Novel Method ◽  
Freely Moving ◽  
Voltage Indicator

AbstractElectrophysiological field potential dynamics have been widely used to investigate brain functions and related psychiatric disorders. Conversely, however, various technical limitations of conventional recording methods have limited its applicability to freely moving subjects, especially when they are in a group and socially interacting with each other. Here, we propose a new method to overcome these technical limitations by introducing a bioluminescent voltage indicator called LOTUS-V. Using our simple and fiber-free recording method, named “SNIPA,” we succeeded in capturing brain activity in freely-locomotive mice, without the need for complicated instruments. This novel method further allowed us to simultaneously record from multiple independently-locomotive animals that were interacting with one another. Further, we successfully demonstrated that the primary visual cortex was activated during the interaction. This methodology will further facilitate a wide range of studies in neurobiology and psychiatry.

scholarly journals Visual physiology of the Layer 4 cortical circuitin silico

2018 ◽  
Author(s):  
Anton Arkhipov ◽  
Nathan W. Gouwens ◽  
Yazan N. Billeh ◽  
Sergey Gratiy ◽  
Ramakrishnan Iyer ◽  
...  
Keyword(s):  
Visual Cortex ◽  
Primary Visual Cortex ◽  
Brain Activity ◽  
Visual Stimuli ◽  
Quantitative Agreement ◽  
In Vivo Experiments ◽  
Model And Simulation ◽  
Layer 4 ◽  
Detailed Circuit

ABSTRACTDespite advances in experimental techniques and accumulation of large datasets concerning the composition and properties of the cortex, quantitative modeling of cortical circuits under in-vivo-like conditions remains challenging. Here we report and publicly release a biophysically detailed circuit model of layer 4 in the mouse primary visual cortex, receiving thalamo-cortical visual inputs. The 45,000-neuron model was subjected to a battery of visual stimuli, and results were compared to published work and new in vivo experiments. Simulations reproduced a variety of observations, including effects of optogenetic perturbations. Critical to the agreement between responses in silico and in vivo were the rules of functional synaptic connectivity between neurons. Interestingly, after extreme simplification the model still performed satisfactorily on many measurements, although quantitative agreement with experiments suffered. These results emphasize the importance of functional rules of cortical wiring and enable a next generation of data-driven models of in vivo neural activity and computations.AUTHOR SUMMARYHow can we capture the incredible complexity of brain circuits in quantitative models, and what can such models teach us about mechanisms underlying brain activity? To answer these questions, we set out to build extensive, bio-realistic models of brain circuitry employing systematic datasets on brain structure and function. Here we report the first modeling results of this project, focusing on the layer 4 of the primary visual cortex (V1) of the mouse. Our simulations reproduced a variety of experimental observations in a large battery of visual stimuli. The results elucidated circuit mechanisms determining patters of neuronal activity in layer 4 – in particular, the roles of feedforward thalamic inputs and specific patterns of intracortical connectivity in producing tuning of neuronal responses to the orientation of motion. Simplification of neuronal models led to specific deficiencies in reproducing experimental data, giving insights into how biological details contribute to various aspects of brain activity. To enable future development of more sophisticated models, we make the software code, the model, and simulation results publicly available.

scholarly journals Superimposed gratings induce diverse response patterns of gamma oscillations in primary visual cortex

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Bin Wang ◽  
Chuanliang Han ◽  
Tian Wang ◽  
Weifeng Dai ◽  
Yang Li ◽  
...  
Keyword(s):  
Visual Cortex ◽  
Primary Visual Cortex ◽  
Field Potential ◽  
Gamma Oscillations ◽  
Neural Mechanisms ◽  
Model Parameters ◽  
Response Patterns ◽  
Region Difference ◽  
High Gamma ◽  
Spiking Activity

AbstractStimulus-dependence of gamma oscillations (GAMMA, 30–90 Hz) has not been fully understood, but it is important for revealing neural mechanisms and functions of GAMMA. Here, we recorded spiking activity (MUA) and the local field potential (LFP), driven by a variety of plaids (generated by two superimposed gratings orthogonal to each other and with different contrast combinations), in the primary visual cortex of anesthetized cats. We found two distinct narrow-band GAMMAs in the LFPs and a variety of response patterns to plaids. Similar to MUA, most response patterns showed that the second grating suppressed GAMMAs driven by the first one. However, there is only a weak site-by-site correlation between cross-orientation interactions in GAMMAs and those in MUAs. We developed a normalization model that could unify the response patterns of both GAMMAs and MUAs. Interestingly, compared with MUAs, the GAMMAs demonstrated a wider range of model parameters and more diverse response patterns to plaids. Further analysis revealed that normalization parameters for high GAMMA, but not those for low GAMMA, were significantly correlated with the discrepancy of spatial frequency between stimulus and sites’ preferences. Consistent with these findings, normalization parameters and diversity of high GAMMA exhibited a clear transition trend and region difference between area 17 to 18. Our results show that GAMMAs are also regulated in the form of normalization, but that the neural mechanisms for these normalizations might differ from those of spiking activity. Normalizations in different brain signals could be due to interactions of excitation and inhibitions at multiple stages in the visual system.

Adult Cortical Dynamics

1998 ◽  
Vol 78 (2) ◽  
pp. 467-485 ◽  
Author(s):  
CHARLES D. GILBERT
Keyword(s):  
Visual Cortex ◽  
Functional Properties ◽  
Primary Visual Cortex ◽  
Visual Information ◽  
Visual Space ◽  
Visual Pathway ◽  
Local Features ◽  
Spatial Integration ◽  
Cortical Dynamics ◽  
Wide Range

Gilbert, Charles D. Adult Cortical Dynamics. Physiol. Rev. 78: 467–485, 1998. — There are many influences on our perception of local features. What we see is not strictly a reflection of the physical characteristics of a scene but instead is highly dependent on the processes by which our brain attempts to interpret the scene. As a result, our percepts are shaped by the context within which local features are presented, by our previous visual experiences, operating over a wide range of time scales, and by our expectation of what is before us. The substrate for these influences is likely to be found in the lateral interactions operating within individual areas of the cerebral cortex and in the feedback from higher to lower order cortical areas. Even at early stages in the visual pathway, cells are far more flexible in their functional properties than previously thought. It had long been assumed that cells in primary visual cortex had fixed properties, passing along the product of a stereotyped operation to the next stage in the visual pathway. Any plasticity dependent on visual experience was thought to be restricted to a period early in the life of the animal, the critical period. Furthermore, the assembly of contours and surfaces into unified percepts was assumed to take place at high levels in the visual pathway, whereas the receptive fields of cells in primary visual cortex represented very small windows on the visual scene. These concepts of spatial integration and plasticity have been radically modified in the past few years. The emerging view is that even at the earliest stages in the cortical processing of visual information, cells are highly mutable in their functional properties and are capable of integrating information over a much larger part of visual space than originally believed.

scholarly journals Unique spatial integration in mouse primary visual cortex and higher visual areas

2019 ◽  
Author(s):  
Kevin A. Murgas ◽  
Ashley M. Wilson ◽  
Valerie Michael ◽  
Lindsey L. Glickfeld
Keyword(s):  
Visual Cortex ◽  
Visual System ◽  
Primary Visual Cortex ◽  
Spatial Information ◽  
Spatial Scales ◽  
Spatial Integration ◽  
Global Features ◽  
Wide Range ◽  
Visual Areas ◽  
Higher Visual Areas

AbstractNeurons in the visual system integrate over a wide range of spatial scales. This diversity is thought to enable both local and global computations. To understand how spatial information is encoded across the mouse visual system, we use two-photon imaging to measure receptive fields in primary visual cortex (V1) and three downstream higher visual areas (HVAs): LM (lateromedial), AL (anterolateral) and PM (posteromedial). We find significantly larger receptive field sizes and less surround suppression in PM than in V1 or the other HVAs. Unlike other visual features studied in this system, specialization of spatial integration in PM cannot be explained by specific projections from V1 to the HVAs. Instead, our data suggests that distinct connectivity within PM may support the area’s unique ability to encode global features of the visual scene, whereas V1, LM and AL may be more specialized for processing local features.

scholarly journals Traumatic brain injury to primary visual cortex produces long-lasting circuit dysfunction

2021 ◽  
Vol 4 (1) ◽  
Author(s):  
Jan C. Frankowski ◽  
Andrzej T. Foik ◽  
Alexa Tierno ◽  
Jiana R. Machhor ◽  
David C. Lyon ◽  
...  
Keyword(s):  
Traumatic Brain Injury ◽  
Visual Cortex ◽  
Brain Injury ◽  
Primary Visual Cortex ◽  
Visual Stimuli ◽  
Orientation Tuning ◽  
V1 Neurons ◽  
Adult Mice ◽  
Electrophysiological Recordings

AbstractPrimary sensory areas of the mammalian neocortex have a remarkable degree of plasticity, allowing neural circuits to adapt to dynamic environments. However, little is known about the effects of traumatic brain injury on visual circuit function. Here we used anatomy and in vivo electrophysiological recordings in adult mice to quantify neuron responses to visual stimuli two weeks and three months after mild controlled cortical impact injury to primary visual cortex (V1). We found that, although V1 remained largely intact in brain-injured mice, there was ~35% reduction in the number of neurons that affected inhibitory cells more broadly than excitatory neurons. V1 neurons showed dramatically reduced activity, impaired responses to visual stimuli and weaker size selectivity and orientation tuning in vivo. Our results show a single, mild contusion injury produces profound and long-lasting impairments in the way V1 neurons encode visual input. These findings provide initial insight into cortical circuit dysfunction following central visual system neurotrauma.

scholarly journals Motion/direction-sensitive thalamic neurons project extensively to the middle layers of primary visual cortex

2021 ◽  
Author(s):  
Jun Zhuang ◽  
Yun Wang ◽  
Naveen D Ouellette ◽  
Emily Turschak ◽  
Rylan Larsen ◽  
...  
Keyword(s):  
Visual Cortex ◽  
Primary Visual Cortex ◽  
Population Level ◽  
Middle Layer ◽  
Current View ◽  
Motion Direction ◽  
Thalamic Neurons ◽  
Novel Approach ◽  
Single Axon

The motion/direction-sensitive and location-sensitive neurons are two major functional types in mouse visual thalamus that project to the primary visual cortex (V1). It has been proposed that the motion/direction-sensitive neurons mainly target the superficial layers in V1, in contrast to the location-sensitive neurons which mainly target the middle layers. Here, by imaging calcium activities of motion/direction-sensitive and location-sensitive axons in V1, we find no evidence for these cell-type specific laminar biases at population level. Furthermore, using a novel approach to reconstruct single-axon structures with identified in vivo response types, we show that, at single-axon level, the motion/direction-sensitive axons have middle layer preferences and project more densely to the middle layers than the location-sensitive axons. Overall, our results demonstrate that Motion/direction-sensitive thalamic neurons project extensively to the middle layers of V1, challenging the current view of the thalamocortical organizations in the mouse visual system.

scholarly journals Temporo-nasally biased moving grating selectivity in mouse primary visual cortex

2019 ◽  
Author(s):  
Marie Tolkiehn ◽  
Simon R. Schultz
Keyword(s):  
Visual Cortex ◽  
Spatial Frequency ◽  
Primary Visual Cortex ◽  
Moving Objects ◽  
Direction Selectivity ◽  
Orientation Tuning ◽  
High Signal ◽  
Forward Movement ◽  
Upward Moving

AbstractOrientation tuning in mouse primary visual cortex (V1) has long been reported to have a random or “salt-and-pepper” organisation, lacking the structure found in cats and primates. Laminar in-vivo multi-electrode array recordings here reveal previously elusive structure in the representation of visual patterns in the mouse visual cortex, with temporo-nasally drifting gratings eliciting consistently highest neuronal responses across cortical layers and columns, whilst upward moving gratings reliably evoked the lowest activities. We suggest this bias in direction selectivity to be behaviourally relevant as objects moving into the visual field from the side or behind may pose a predatory threat to the mouse whereas upward moving objects do not. We found furthermore that direction preference and selectivity was affected by stimulus spatial frequency, and that spatial and directional tuning curves showed high signal correlations decreasing with distance between recording sites. In addition, we show that despite this bias in direction selectivity, it is possible to decode stimulus identity and that spatiotemporal features achieve higher accuracy in the decoding task whereas spike count or population counts are sufficient to decode spatial frequencies implying different encoding strategies.Significance statementWe show that temporo-nasally drifting gratings (i.e. opposite the normal visual flow during forward movement) reliably elicit the highest neural activity in mouse primary visual cortex, whereas upward moving gratings reliably evoke the lowest responses. This encoding may be highly behaviourally relevant, as objects approaching from the periphery may pose a threat (e.g. predators), whereas upward moving objects do not. This is a result at odds with the belief that mouse primary visual cortex is randomly organised. Further to this biased representation, we show that direction tuning depends on the underlying spatial frequency and that tuning preference is spatially correlated both across layers and columns and decreases with cortical distance, providing evidence for structural organisation in mouse primary visual cortex.

scholarly journals Reward Timing and Its Expression by Inhibitory Interneurons in the Mouse Primary Visual Cortex

2020 ◽  
Vol 30 (8) ◽  
pp. 4662-4676
Author(s):  
Kevin J Monk ◽  
Simon Allard ◽  
Marshall G Hussain Shuler
Keyword(s):  
Visual Cortex ◽  
Primary Visual Cortex ◽  
Network Architecture ◽  
Sensory Cortex ◽  
Inhibitory Interneurons ◽  
In Vivo Electrophysiology ◽  
Timing Information ◽  
Primary Sensory Cortex ◽  
A Site

Abstract The primary sensory cortex has historically been studied as a low-level feature detector, but has more recently been implicated in many higher-level cognitive functions. For instance, after an animal learns that a light predicts water at a fixed delay, neurons in the primary visual cortex (V1) can produce “reward timing activity” (i.e., spike modulation of various forms that relate the interval between the visual stimulus and expected reward). Local manipulations to V1 implicate it as a site of learning reward timing activity (as opposed to simply reporting timing information from another region via feedback input). However, the manner by which V1 then produces these representations is unknown. Here, we combine behavior, in vivo electrophysiology, and optogenetics to investigate the characteristics of and circuit mechanisms underlying V1 reward timing in the head-fixed mouse. We find that reward timing activity is present in mouse V1, that inhibitory interneurons participate in reward timing, and that these representations are consistent with a theorized network architecture. Together, these results deepen our understanding of V1 reward timing and the manner by which it is produced.

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