Ground-state and excited-state properties ofLaMnO3from full-potential calculations

The generalized Van Vleck second order multireference perturbation theory (GVVPT2) method was used to investigate the low-lying electronic states of Ni2. Because the nickel atom has an excitation energy of only 0.025 eV to its first excited state (the least in the first row of transition elements), Ni2 has a particularly large number of low-lying states. Full potential energy curves (PECs) of more than a dozen low-lying electronic states of Ni2, resulting from the atomic combinations 3F4 + 3F4 and 3D3 + 3D3, were computed. In agreement with previous theoretical studies, we found the lowest lying states of Ni2 to correlate with the 3D3 + 3D3 dissociation limit, and the holes in the d-subshells were in the subspace of delta orbitals (i.e., the so-dubbed δδ-states). In particular, the ground state was determined as X 1Γg and had spectroscopic constants: bond length (Re) = 2.26 Å, harmonic frequency (ωe) = 276.0 cm−1, and binding energy (De) = 1.75 eV; whereas the 1 1Σg+ excited state (with spectroscopic constants: Re = 2.26 Å, ωe = 276.8 cm−1, and De = 1.75) of the 3D3 + 3D3 dissociation channel lay at only 16.4 cm−1 (0.002 eV) above the ground state at the equilibrium geometry. Inclusion of scalar relativistic effects through the spin-free exact two component (sf-X2C) method reduced the bond lengths of both of these two states to 2.20 Å, and increased their binding energies to 1.95 eV and harmonic frequencies to 296.0 cm−1 for X 1Γg and 297.0 cm−1 for 1 1Σg+. These values are in good agreement with experimental values of Re = 2.1545 ± 0.0004 Å, ωe = 280 ± 20 cm−1, and D0 = 2.042 ± 0.002 eV for the ground state. All states considered within the 3F4 + 3F4 dissociation channel proved to be energetically high-lying and van der Waals-like in nature. In contrast to most previous theoretical studies of Ni2, full PECs of all considered electronic states of the molecule were produced.

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Renilla Bioluminescence: A Morphologic Approach to the Location of Photocytes

Proceedings, annual meeting, Electron Microscopy Society of America ◽

10.1017/s0424820100051050 ◽

1974 ◽

Vol 32 ◽

pp. 208-209

Author(s):

Ben O. Spurlock ◽

Milton J. Cormier

Keyword(s):

Excited State ◽

Ground State ◽

Molecular Basis ◽

Light Emission ◽

Chemical Basis ◽

Electronic Excited State ◽

Colonial Form ◽

The Common ◽

Eighteenth And Nineteenth Centuries ◽

Catalyzed Oxidation

The phenomenon of bioluminescence has fascinated layman and scientist alike for many centuries. During the eighteenth and nineteenth centuries a number of observations were reported on the physiology of bioluminescence in Renilla, the common sea pansy. More recently biochemists have directed their attention to the molecular basis of luminosity in this colonial form. These studies have centered primarily on defining the chemical basis for bioluminescence and its control. It is now established that bioluminescence in Renilla arises due to the luciferase-catalyzed oxidation of luciferin. This results in the creation of a product (oxyluciferin) in an electronic excited state. The transition of oxyluciferin from its excited state to the ground state leads to light emission.

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Ground State and Excited State H-Atom Temperatures in a Microwave Plasma Diamond Deposition Reactor

Journal de Physique III ◽

10.1051/jp3:1996176 ◽

1996 ◽

Vol 6 (9) ◽

pp. 1167-1180 ◽

Cited By ~ 25

Author(s):

A. Gicquel ◽

M. Chenevier ◽

Y. Breton ◽

M. Petiau ◽

J. P. Booth ◽

...

Keyword(s):

Excited State ◽

Ground State ◽

Microwave Plasma ◽

Diamond Deposition

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Spin-Forbidden Excitation Enables Infrared Photoredox Catalysis

10.26434/chemrxiv.12124215.v1 ◽

2020 ◽

Author(s):

Tomislav Rovis ◽

Benjamin D. Ravetz ◽

Nicholas E. S. Tay ◽

Candice Joe ◽

Melda Sezen-Edmonds ◽

...

Keyword(s):

Excited State ◽

Ground State ◽

Intersystem Crossing ◽

Photoredox Catalysis ◽

Infrared Irradiation ◽

Triplet Excitation ◽

New Family ◽

Ir Light

We describe a new family of catalysts that undergo direct ground state singlet to excited state triplet excitation with IR light, leading to photoredox catalysis without the energy waste associated with intersystem crossing. The finding allows a mole scale reaction in batch using infrared irradiation.

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Nanosecond Photodynamics Simulations of a Cis-Trans Isomerization Are Enabled by Machine Learning

10.26434/chemrxiv.13047863 ◽

2020 ◽

Author(s):

Jingbai Li ◽

Patrick Reiser ◽

André Eberhard ◽

Pascal Friederich ◽

Steven Lopez

Keyword(s):

Machine Learning ◽

Neural Networks ◽

Excited State ◽

Adaptive Sampling ◽

Computational Cost ◽

Ground Truth ◽

Absolute Error ◽

Photochemical Reactions ◽

Computational Techniques ◽

Full Potential

Photochemical reactions are being increasingly used to construct complex molecular architectures with mild and straightforward reaction conditions. Computational techniques are increasingly important to understand the reactivities and chemoselectivities of photochemical isomerization reactions because they offer molecular bonding information along the excited-state(s) of photodynamics. These photodynamics simulations are resource-intensive and are typically limited to 1–10 picoseconds and 1,000 trajectories due to high computational cost. Most organic photochemical reactions have excited-state lifetimes exceeding 1 picosecond, which places them outside possible computational studies. Westermeyr et al. demonstrated that a machine learning approach could significantly lengthen photodynamics simulation times for a model system, methylenimmonium cation (CH2NH2+).We have developed a Python-based code, Python Rapid Artificial Intelligence Ab Initio Molecular Dynamics (PyRAI2MD), to accomplish the unprecedented 10 ns cis-trans photodynamics of trans-hexafluoro-2-butene (CF3–CH=CH–CF3) in 3.5 days. The same simulation would take approximately 58 years with ground-truth multiconfigurational dynamics. We proposed an innovative scheme combining Wigner sampling, geometrical interpolations, and short-time quantum chemical trajectories to effectively sample the initial data, facilitating the adaptive sampling to generate an informative and data-efficient training set with 6,232 data points. Our neural networks achieved chemical accuracy (mean absolute error of 0.032 eV). Our 4,814 trajectories reproduced the S1 half-life (60.5 fs), the photochemical product ratio (trans: cis = 2.3: 1), and autonomously discovered a pathway towards a carbene. The neural networks have also shown the capability of generalizing the full potential energy surface with chemically incomplete data (trans → cis but not cis → trans pathways) that may offer future automated photochemical reaction discoveries.

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Excited-State Dynamics in the RNA Nucleotide Uridine 5’-Monophosphate Investigated by Femtosecond Broadband Transient Absorption Spectroscopy

10.26434/chemrxiv.7860023 ◽

2019 ◽

Author(s):

Matthew M. Brister ◽

Carlos Crespo-Hernández

Keyword(s):

Excited State ◽

Excited States ◽

Ground State ◽

Transient Absorption ◽

Electronic Energy ◽

Transient Absorption Spectroscopy ◽

Electronic Relaxation ◽

Vibrationally Excited ◽

Excited State Dynamics ◽

Π State

Damage to RNA from ultraviolet radiation induce chemical modifications to the nucleobases. Unraveling the excited states involved in these reactions is essential, but investigations aimed at understanding the electronic-energy relaxation pathways of the RNA nucleotide uridine 5’-monophosphate (UMP) have not received enough attention. In this Letter, the excited-state dynamics of UMP is investigated in aqueous solution. Excitation at 267 nm results in a trifurcation event that leads to the simultaneous population of the vibrationally-excited ground state, a longlived 1nOπ* state, and a receiver triplet state within 200 fs. The receiver state internally convert to the long-lived 3ππ* state in an ultrafast time scale. The results elucidate the electronic relaxation pathways and clarify earlier transient absorption experiments performed for uracil derivatives in solution. This mechanistic information is important because long-lived nπ* and ππ* excited states of both singlet and triplet multiplicities are thought to lead to the formation of harmful photoproducts.

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Mechanistic analysis of light-driven overcrowded alkene-based molecular motors by multiscale molecular simulations

Physical Chemistry Chemical Physics ◽

10.1039/d0cp06685k ◽

2021 ◽

Vol 23 (14) ◽

pp. 8525-8540

Author(s):

Mudong Feng ◽

Michael K. Gilson

Keyword(s):

Molecular Dynamics ◽

Excited State ◽

Molecular Dynamics Simulations ◽

Ground State ◽

Molecular Motors ◽

Motor Performance ◽

Molecular Simulations ◽

Mechanistic Analysis ◽

Dynamics Simulations ◽

Shed Light

Ground-state and excited-state molecular dynamics simulations shed light on the rotation mechanism of small, light-driven molecular motors and predict motor performance. How fast can they rotate; how much torque and power can they generate?

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Relative yields of ground-state and excited-state ions of Zn, Cd and Hg in thermal-energy charge-transfer reactions of He+ions

Journal of Physics B Atomic and Molecular Physics ◽

10.1088/0022-3700/12/8/014 ◽

1979 ◽

Vol 12 (8) ◽

pp. 1399-1405 ◽

Cited By ~ 2

Author(s):

I M Littlewood ◽

J A Piper ◽

C E Webb

Keyword(s):

Excited State ◽

Charge Transfer ◽

Thermal Energy ◽

Ground State ◽

Energy Charge ◽

Transfer Reactions ◽

Charge Transfer Reactions

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Ground-state and excited-state absorption in rare-earth doped optical fibres

Electronics Letters ◽

10.1049/el:19900210 ◽

1990 ◽

Vol 26 (5) ◽

pp. 320 ◽

Cited By ~ 8

Author(s):

M. Monerie ◽

T. Georges ◽

P.L. Francois ◽

J.Y. Allain ◽

D. Neveux

Keyword(s):

Rare Earth ◽

Excited State ◽

Ground State ◽

Excited State Absorption ◽

Optical Fibres ◽

Rare Earth Doped

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A meta-analysis and review examining a possible role for oxidative stress and singlet oxygen in diverse diseases

Biochemical Journal ◽

10.1042/bcj20161058 ◽

2017 ◽

Vol 474 (16) ◽

pp. 2713-2731 ◽

Cited By ~ 9

Author(s):

Athinoula L. Petrou ◽

Athina Terzidaki

Keyword(s):

Oxidative Stress ◽

Excited State ◽

Singlet Oxygen ◽

Ground State ◽

Meta Analysis ◽

Common Mechanism ◽

High Electron ◽

A Value ◽

First Excited State

From kinetic data (k, T) we calculated the thermodynamic parameters for various processes (nucleation, elongation, fibrillization, etc.) of proteinaceous diseases that are related to the β-amyloid protein (Alzheimer's), to tau protein (Alzheimer's, Pick's), to α-synuclein (Parkinson's), prion, amylin (type II diabetes), and to α-crystallin (cataract). Our calculations led to ΔG≠ values that vary in the range 92.8–127 kJ mol−1 at 310 K. A value of ∼10–30 kJ mol−1 is the activation energy for the diffusion of reactants, depending on the reaction and the medium. The energy needed for the excitation of O2 from the ground to the first excited state (1Δg, singlet oxygen) is equal to 92 kJ mol−1. So, the ΔG≠ is equal to the energy needed for the excitation of ground state oxygen to the singlet oxygen (1Δg first excited) state. The similarity of the ΔG≠ values is an indication that a common mechanism in the above disorders may be taking place. We attribute this common mechanism to the (same) role of the oxidative stress and specifically of singlet oxygen, (1Δg), to the above-mentioned processes: excitation of ground state oxygen to the singlet oxygen, 1Δg, state (92 kJ mol−1), and reaction of the empty π* orbital with high electron density regions of biomolecules (∼10–30 kJ mol−1 for their diffusion). The ΔG≠ for cases of heat-induced cell killing (cancer) lie also in the above range at 310 K. The present paper is a review and meta-analysis of literature data referring to neurodegenerative and other disorders.

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