Towards a multigene phylogeny of the Cymatosiraceae (Bacillariophyta, Mediophyceae) I: novel taxa within the subfamily cymatosiroideae based on molecular and morphological data

2017 ◽  
Vol 53 (2) ◽  
pp. 342-360 ◽  
Author(s):  
Przemysław Dąbek ◽  
Matt P. Ashworth ◽  
Andrzej Witkowski ◽  
Chunlian Li ◽  
Thomas G. Bornman ◽  
...  
Keyword(s):  
Morphological Data ◽  
Multigene Phylogeny ◽  
Novel Taxa

Phylogenetic systematics of day geckos, genus Phelsuma, based on molecular and morphological data (Squamata: Gekkonidae)

Zootaxa ◽  
2010 ◽  
Vol 2429 (1) ◽  
pp. 1 ◽  
Author(s):  
SARAH ROCHA ◽  
HERBERT RÖSLER ◽  
PHILIP-SEBASTIAN GEHRING ◽  
FRANK GLAW ◽  
DAVID POSADA ◽  
...  
Keyword(s):  
Molecular Markers ◽  
Morphological Characters ◽  
Molecular Data ◽  
Morphological Data ◽  
Species Assemblages ◽  
Rrna Gene ◽  
Phylogenetic Systematics ◽  
Multigene Phylogeny ◽  
Species Groups ◽  
The 16S Rrna Gene

We review the intrageneric systematics of day geckos, genus Phelsuma (Squamata: Sauria: Gekkonidae) in the light of a recently published multigene phylogeny, and provide an overview of 19 selected chromatic, morphological and behavioural characters for all currently recognized species and subspecies in the genus. To replace previous attempts of dividing the genus into phenetic species assemblages, we propose the following monophyletic species groups and summarize the morphological characters that partly support this grouping: Phelsuma barbouri group (P. barbouri, P. pronki); P. dubia group (P. berghofi, P. dubia, P. flavigularis, P. hielscheri, P. malamakibo, P. modesta, P. nigristriata, P. ravenala); P. mutabilis group (P. borai, P. breviceps, P. mutabilis); P. cepediana group (P. borbonica, P. cepediana, P. guentheri, P. guimbeaui, P. inexpectata, P. ornata, P. rosagularis as well as the extinct species P. edwardnewtonii and P. gigas); P. astriata group (P. astriata, P. sundbergi); P. madagascariensis group (P. abbotti, P. grandis, P. guttata, P. kochi, P. madagascariensis, P. parkeri, P. seippi and probably P. masohoala); P. lineata group (P. antanosy, P. comorensis, P. kely, P. lineata, P. pusilla, P. quadriocellata and probably P. hoeschi); P. laticauda group (P. laticauda, P. pasteuri, P. robertmertensi, P. v-nigra); P. klemmeri group (P. klemmeri); P. andamanense group (P. andamanense) and P. standingi group (P. standingi). Due to their equivocal placements based on different molecular markers, we refrain from assigning P. serraticauda and P. vanheygeni to any of these species groups at this time. We complement the molecular data with new trees based on partial sequences of the 16S rRNA gene for the P. madagascariensis- and P. lineata groups and propose to elevate P. lineata dorsivittata and P. quadriocellata parva to full species rank as P. dorsivittata and P. parva.

scholarly journals Ophiostomatoid species associated with pine trees (Pinus spp.) infested by Cryphalus piceae from eastern China, including five new species

MycoKeys ◽  
2021 ◽  
Vol 83 ◽  
pp. 181-208
Author(s):  
Runlei Chang ◽  
Xiuyu Zhang ◽  
Hongli Si ◽  
Guoyan Zhao ◽  
Xiaowen Yuan ◽  
...  
Keyword(s):  
Bark Beetles ◽  
Eastern China ◽  
Fungal Species ◽  
Morphological Data ◽  
Ophiostomatoid Fungi ◽  
Pine Trees ◽  
Novel Taxa ◽  
Study Sites ◽  
Pinus Spp ◽  
Isolated Species

Cryphalus piceae attacks various economically important conifers. Similar to other bark beetles, Cr. piceae plays a role as a vector for an assortment of fungi and nematodes. Previously, several ophiostomatoid fungi were isolated from Cr. piceae in Poland and Japan. In the present study, we explored the diversity of ophiostomatoid fungi associated with Cr. piceae infesting pines in the Shandong Province of China. We isolated ophiostomatoid fungi from both galleries and beetles collected from our study sites. These fungal isolates were identified using both molecular and morphological data. In this study, we recovered 175 isolates of ophiostomatoid fungi representing seven species. Ophiostoma ips was the most frequently isolated species. Molecular and morphological data indicated that five ophiostomatoid fungal species recovered were previously undescribed. Thus, we proposed these five novel species as Ceratocystiopsis yantaiensis, C. weihaiensis, Graphilbum translucens, Gr. niveum, and Sporothrix villosa. These new ophiostomatoid fungi add to the increasing number of fungi known from China, and this evidence suggests that numerous novel taxa are awaiting discovery in other forests of China.

Scanning electron microscopy of freeze-fractured prescapular lymph node of caprine

1984 ◽  
Vol 42 ◽  
pp. 244-245
Author(s):  
O. Faroon ◽  
F. Al-Bagdadi ◽  
T. G. Snider ◽  
C. Titkemeyer
Keyword(s):  
Lymph Node ◽  
Lymph Nodes ◽  
Lymphatic System ◽  
Three Dimensional ◽  
Meat Products ◽  
The Body ◽  
Morphological Data ◽  
The World ◽  
Cellular Constituent ◽  
Scanning Electron

The lymphatic system is very important in the immunological activities of the body. Clinicians confirm the diagnosis of infectious diseases by palpating the involved cutaneous lymph node for changes in size, heat, and consistency. Clinical pathologists diagnose systemic diseases through biopsies of superficial lymph nodes. In many parts of the world the goat is considered as an important source of milk and meat products.The lymphatic system has been studied extensively. These studies lack precise information on the natural morphology of the lymph nodes and their vascular and cellular constituent. This is due to using improper technique for such studies. A few studies used the SEM, conducted by cutting the lymph node with a blade. The morphological data collected by this method are artificial and do not reflect the normal three dimensional surface of the examined area of the lymph node. SEM has been used to study the lymph vessels and lymph nodes of different animals. No information on the cutaneous lymph nodes of the goat has ever been collected using the scanning electron microscope.

Control of Secretory Production in the Isopod Hepatopancreas

1972 ◽  
Vol 30 ◽  
pp. 166-167
Author(s):  
John W. Roberts ◽  
E. R. Witkus
Keyword(s):  
B Cells ◽  
Morphological Data ◽  
Secretory Product ◽  
Secretory Function ◽  
Secretory Material ◽  
Blind Ending ◽  
Secretory Production ◽  
Regenerative Cells ◽  
Immature Cells ◽  
And Storage

The isopod hepatopancreas, as exemplified by Oniscus ascellus. is comprised of four blind-ending diverticula. The regenerative cells at the tip of each diverticula differentiate into either club-shaped B-cells, which serve a secretory function, or into conoid S-cells, which serve in the absorption and storage of nutrients.The glandular B-cells begin producing secretory material with the development of rough endoplasmic reticulum during their process of maturation from the undifferentiated regenerative cells. Cytochemical and morphological data indicate that the hepatopancreas sequentially produces two types of secretory material within the large club-shaped cells. The production of the carbohydrate-like secretory product in immature cells seems to be phased out as the production of the osmiophilic secretion was phased in as the cell matured.

Silicon Surface Chemical Treatments in Oxide/Nitride Dielectric Stack Properties

2002 ◽  
Vol 716 ◽  
Author(s):  
D. Jacques ◽  
S. Petitdidier ◽  
J.L. Regolini ◽  
K. Barla
Keyword(s):  
Oxygen Content ◽  
Oxide Thickness ◽  
Morphological Data ◽  
Electrical Characteristics ◽  
Electrical Measurements ◽  
Chemical Cleaning ◽  
Force Microscopy ◽  
Chemical Treatments ◽  
Atomic Force ◽  
Interfacial Oxygen

AbstractOxide/Nitride dielectric stack is widely used as the standard dielectric for DRAM capacitors. The influence of the chemical cleaning prior to the stack formation has been studied in this work. As a result, morphological data such as stack surface roughness (Atomic Force Microscopy) and silicon nitride (SiN) incubation time for growth are comparable for all the studied cases on <Si>. However, Tof-SIMS exhibits different oxygen content at the Si/stack interface following the different chemical treatments. Electrical measurements show comparable C-V and I-V results, for the same Equivalent Oxide Thickness (same capacitance at strong accumulation i.e.-3V) while the different studied interfaces bring different interface states density with lower values for higher interfacial oxygen content. For DRAM applications, a clear improvement in electrical characteristics is obtained under low interfacial oxygen content conditions. Results are compared in embedded-DRAM cells for which we developed an industrially compatible dielectric deposition sequence to obtain minimum leakage current with maximum specific capacitance and no particular linking constraints.

Efficacy evaluation of the CEUS-LI-RADS-v2017 system in differential diagnosis of liver tumors

2019 ◽  
pp. 57-67
Author(s):  
A. N. Katrich ◽  
V. A. Porkhanov ◽  
N. S. Ryabin
Keyword(s):  
Risk Factors ◽  
Differential Diagnosis ◽  
Liver Tumors ◽  
Morphological Data ◽  
Malignant Neoplasms ◽  
Diagnostic Efficiency ◽  
Efficacy Evaluation ◽  
General Group ◽  
Group 2 ◽  
Group 1

Objective: efficacy evaluation of the CEUS LI RADS v2017® system for differential diagnosis of liver tumors in patients with and without cirrhosis.Materials and methods. Retrospective analysis of diagnostic results of the 165 patients with liver tumors (177 nodules) was done. All patients underwent CEUS with results interpretation in accordance to the CEUS LIRADSv2017 ® criteria. Patients were divided into 2 groups based on clinical and morphological data. Group 1 included 62 patients with cirrhosis and/or CVH. Group 2 included 110 patients without risk factors for HCC.Results. Diagnostic efficiency of CEUS LI RADS v2017® for HCC identification was: group 1 – Se – 100%, Sp – 88%, Ac – 95.5%; group 2 – Se – 100%, Sp – 68.8%, Ac – 72.7%; general group Se – 100%, Sp – 72.2%, Ac – 81.4%. In the 2nd group, 21 out of 22 neoplasms, confirmed morphologically as FNH, we classified as LR 4. By applying benign character and specific contrasting patterns of FNG, they were transferred from LR 4 to LR 3. This allowed to increase sensitivity and specificity of differential diagnosis in group 2 (Se – 100%, Sp – 90.6%, Ac – 91.8%) and in general group (Se – 100%, Sp – 90.1%, Ac – 93.2%). Diagnostic efficiency of the criteria for non hepatocellular malignant neoplasms (LR M) was: group 1 – Se – 77.8%, Sp – 100%, Ac – 97%; group 2 – Se – 90%, Sp – 96.7%, Ac – 93.6%; general group- Se – 88.1%, Sp – 98.3%, Ac – 94.9%.Conclusion. Our study confirmed high accuracy of the CEUS LI RADS v2017® system in the differential diagnosis of focal liver tumors. Modification of the system (in particular, transfer of typical FNG forms from the LR 4 category) will make it possible to increase the accuracy of diagnostics by 20%. It will allow to use the LI RADS v2017® system for interpretation CEUS not only among patients with liver cirrhosis, but also in a general group without risk factors of GCC.

Morphotectonic Analysis of Tanjung Bungo Area Based on Geological Structure Control, Central Sumatera Basin

2020 ◽  
Author(s):  
D., A., L., A. Putri
Keyword(s):  
Natural Resources ◽  
River Flow ◽  
Measurement Data ◽  
River System ◽  
Flow Patterns ◽  
Source Rocks ◽  
Aerial Photographs ◽  
Morphological Data ◽  
Tectonic Activity ◽  
Geological Structures

Tectonic activity in an area could result in various impacts such as changes in elevation, level of slope percentages, river flow patterns and systems, and the formation of geological structures both locally and regionally, which will form a new landscape. The tectonic activity also affects the stratigraphic sequences of the area. Therefore, it is necessary to study morphotectonic or landscape forms that are influenced by active tectonic activities, both those occur recently and in the past. These geological results help provide information of the potential of natural resources in and around Tanjung Bungo area. Morphological data are based on three main aspects including morphogenesis, morphometry, and morphography. The data are collected in two ways, the first is field survey by directly observing and taking field data such as measuring geological structures, rock positions, and outcrop profiles. The second way is to interpret them through Digital Elevation Model (DEM) and aerial photographs by analyzing river flow patterns and lineament analysis. The field measurement data are processed using WinTensor, Dips, and SedLog Software. The supporting data such as Topographic Maps, Morphological Elevation Maps, Slope Maps, Flow Pattern Maps, and Lineament Maps are based on DEM data and are processed using ArcGis Software 10.6.1 and PCI Geomatica. Morphotectonically, the Tanjung Bungo area is at a moderate to high-class level of tectonic activity taken place actively resulted in several joints, faults, and folds. The formation of geological structures has affected the morphological conditions of the area as seen from the development of steep slopes, structural flow patterns such as radial, rectangular, and dendritic, as well as illustrated by rough surface relief in Tanjung Bungo area. This area has the potential for oil and gas resources as indicated by the Telisa Formation, consisting of calcareous silts rich in planktonic and benthonic fossils, which may be source rocks and its contact with the Menggala Formation which is braided river system deposits that could be good reservoirs. Further research needs to be done since current research is only an interpretation of surface data. Current natural resources being exploited in Tanjung Bungo region are coals. The coals have thicknesses of 5-7 cm and are classified as bituminous coals.

First Records of Bufo luchunnicus (Yang et Rao, 2008) and Amolops wenshanensis Yuan, Jin, Li, Stuart et Wu, 2018 (Anura: Bufonidae, Ranidae) from Vietnam

2020 ◽  
Vol 27 (2) ◽  
pp. 81-86
Author(s):  
Cuong The Pham ◽  
Minh Duc Le ◽  
Chung Van Hoang ◽  
Anh Van Pham ◽  
Thomas Ziegler ◽  
...  
Keyword(s):  
Natural History ◽  
Genetic Divergence ◽  
Morphological Data ◽  
Type Series ◽  
Lao Cai ◽  
First Time ◽  
Nd2 Gene ◽  
Quang Ninh

We record two species of amphibians for the first time from Vietnam: Bufo luchunnicus from Lao Cai and Son La provinces and Amolops wenshanensis from Quang Ninh Province. Morphologically, the Vietnamese representatives of B. luchunnicus resemble the type series from China. The specimen of A. wenshanensis from Vietnam slightly differs from the type series from China by having a smaller size (SVL 33.2 mm vs. 35.7 – 39.9 mm in males) and the presence of distinct transverse bands on the dorsal surfaces of limbs. Genetic divergence between the sequence of the Vietnamese specimen and those of A. wenshanensis from China available from GenBank is 1.2 – 1.6% (ND2 gene). In addition, morphological data and natural history notes of aforementioned species are provided from Vietnam.

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