Molecular Epidemiology of Campylobacter coli Strains Isolated from Different Sources in New Zealand between 2005 and 2014
ABSTRACTCampylobacteriosis is one of the most important foodborne diseases worldwide and a significant health burden in New Zealand.Campylobacter jejuniis the predominant species worldwide, accounting for approximately 90% of human cases, followed byCampylobacter coli. Most studies in New Zealand have focused onC. jejuni; hence, the impact ofC. colistrains on human health is not well understood. The aim of this study was to genotypeC. coliisolates collected in the Manawatu region of New Zealand from clinical cases, fresh poultry meat, ruminant feces, and environmental water sources, between 2005 and 2014, to study their population structure and estimate the contribution of each source to the burden of human disease.Campylobacterisolates were identified by PCR and typed by multilocus sequence typing.C. coliaccounted for 2.9% (n =47/1,601) ofCampylobacterisolates from human clinical cases, 9.6% (n =108/1,123) from poultry, 13.4% (n =49/364) from ruminants, and 6.4% (n =11/171) from water. Molecular subtyping revealed 27 different sequence types (STs), of which 18 belonged to clonal complex ST-828. ST-1581 was the most prevalentC. colisequence type isolated from both human cases (n =12/47) and poultry (n =44/110). When classified using cladistics, all sequence types belonged to clade 1 except ST-7774, which belonged to clade 2. ST-854, ST-1590, and ST-4009 were isolated only from human cases and fresh poultry, while ST-3232 was isolated only from human cases and ruminant sources. Modeling indicated ruminants and poultry as the main sources ofC. colihuman infection.IMPORTANCEWe performed a molecular epidemiological study ofCampylobacter coliinfection in New Zealand, one of few such studies globally. This study analyzed the population genetic structure of the bacterium and included a probabilistic source attribution model covering different animal and water sources. The results are discussed in a global context.