Inducible Expression of a Resistance-Nodulation-Division-Type Efflux Pump in Staphylococcus aureus Provides Resistance to Linoleic and Arachidonic Acids
ABSTRACTAlthoughStaphylococcus aureusis exposed to antimicrobial fatty acids on the skin, in nasal secretions, and in abscesses, a specific mechanism of inducible resistance to this important facet of innate immunity has not been identified. Here, we have sequenced the genome ofS. aureusUSA300 variants selected for their ability to grow at an elevated concentration of linoleic acid. The fatty acid-resistant clone FAR7 had a single nucleotide polymorphism resulting in an H121Y substitution in an uncharacterized transcriptional regulator belonging to the AcrR family, which was divergently transcribed from a gene encoding a member of the resistance-nodulation-division superfamily of multidrug efflux pumps. We named these genesfarRandfarE, forregulator andeffector offattyacidresistance, respectively. Several lines of evidence indicated that FarE promotes efflux of antimicrobial fatty acids and is regulated by FarR. First, expression offarEwas strongly induced by arachidonic and linoleic acids in anfarR-dependent manner. Second, an H121Y substitution in FarR resulted in increased expression offarEand was alone sufficient to promote increased resistance ofS. aureusto linoleic acid. Third, inactivation offarEresulted in a significant reduction in the inducible resistance ofS. aureusto the bactericidal activity of 100 μM linoleic acid, increased accumulation of [14C]linoleic acid by growing cells, and severely impaired growth in the presence of nonbactericidal concentrations of linoleic acid. Cumulatively, these findings represent the first description of a specific mechanism of inducible resistance to antimicrobial fatty acids in a Gram-positive pathogen.IMPORTANCEStaphylococcus aureuscolonizes approximately 25% of humans and is a leading cause of human infectious morbidity and mortality. To persist on human hosts,S. aureusmust have intrinsic defense mechanisms to cope with antimicrobial fatty acids, which comprise an important component of human innate defense mechanisms. We have identified a novel pair of genes,farRandfarE, that constitute a dedicated regulator and effector ofS. aureusresistance to linoleic and arachidonic acids, which are major fatty acids in human membrane phospholipid. Expression offarE, which encodes an efflux pump, is induced in anfarR-dependent mechanism, in response to these antimicrobial fatty acids that would be encountered in a tissue abscess.