Density functional theory study on silver clusters using dimers, trimers, and tetramers as building units

2015 ◽  
Vol 93 (3) ◽  
pp. 318-325 ◽  
Author(s):  
T.N. Rekha ◽  
Beulah J.M. Rajkumar
Keyword(s):  
Density Functional Theory ◽  
Molecular Orbital ◽  
Density Functional ◽  
Nearest Neighbor ◽  
Population Analysis ◽  
Growth Patterns ◽  
Binding Energies ◽  
Silver Clusters ◽  
Mulliken Population ◽  
Functional Theory

We systematically investigate growth patterns of small silver clusters, Agn (n ≤ 10), using density functional theory (DFT) and time-dependent density functional theory (TDDFT), considering Ag2, Ag3, and Ag4 as basic building units. Nearest-neighbor distances increase gradually with increasing n. Compared with an earlier study, where the clusters were developed by adding one atom at a time, the clusters derived in this investigation had considerably higher computed binding energies, confirming increased stability and suggesting possible growth patterns using these basic units. We used TDDFT methods to simulate the ultraviolet–visible spectra of the silver clusters, which are in good agreement with the reported experimental absorption spectrum of Ag nanoparticles. Our study indicates that the clusters formed with units of Ag3 tend to form more reactive clusters, particularly if an odd number of atoms is involved. Further, the higher level of computations employed gives better insight into the process of particle growth. The disproportionation energies of clusters built using this scheme are compared with those built one atom at a time. Mulliken population analysis of the distributions indicates the presence of polarities among the atoms in some of the cluster isomers, suggesting sites of increased activity. In addition, patterns established for the highest occupied molecular orbital (HOMO), lowest unoccupied molecular orbital (LUMO), and HOMO–LUMO energy gaps may be used to model stable clusters with modified optoelectrical properties.

scholarly journals Comparative DFT study on selective hydrogenation of acrolein catalyzed by pure Mo2C(001) and Pt/Mo2C(001)

2021 ◽  
Author(s):  
Jinrong Wu ◽  
Yanping Huang ◽  
Weiyan Wang ◽  
Wensong Li ◽  
Zhengke Li ◽  
...  
Keyword(s):  
Density Functional Theory ◽  
Allyl Alcohol ◽  
Active Sites ◽  
Density Functional ◽  
Population Analysis ◽  
Mulliken Population Analysis ◽  
Mulliken Population ◽  
Functional Theory ◽  
Elementary Reactions ◽  
Bond Hydrogenation

Abstract In this paper, Density Functional Theory (DFT) calculations were conducted to study the adsorption and stepwise hydrogenation of acrolein (CH 2 =CHCH=O) on pure Mo 2 C(001) and Pt/Mo 2 C(001). The electronic properties were investigated by Mulliken population analysis. The results showed that Mo atoms obtained some electrons from surrounding Pt and C atoms, thereby enhancing the hydrogenation activity of Mo atoms around Pt atoms and forming local active sites dominated by Mo atoms around Pt atoms. As a result, the adsorption energy of the species on Pt/Mo 2 C(001) is generally higher than that on Mo 2 C(001), and the activation energies of the elementary reactions involved in stepwise hydrogenation of acrolein on Pt/Mo 2 C(001) are lower than those on Mo 2 C(001). Moreover, Pt/Mo 2 C(001) exhibits higher selectivity for C=O bond hydrogenation than Mo 2 C(001) and produces more allyl alcohol.

Electronic and geometric structure of AuxCuy clusters studied by density functional theory

2014 ◽  
Vol 25 (06) ◽  
pp. 1450011 ◽  
Author(s):  
Y. Kadioglu ◽  
O. Üzengi Aktürk ◽  
M. Tomak
Keyword(s):  
Density Functional Theory ◽  
Molecular Orbital ◽  
Density Functional ◽  
Local Density ◽  
Three Dimensional ◽  
Binding Energies ◽  
Generalized Gradient ◽  
Functional Theory ◽  
Highest Occupied Molecular Orbital ◽  
Lowest Unoccupied Molecular Orbital

We have determined the stable structures of Au Cu n, Au 2 Cu n, Au 3 Cu n and Au x Cu 8-x clusters. It has been observed that Au Cu n, Au 2 Cu n and Au 3 Cu n systems have two-dimensional (2D) structures up to six atoms and they become three-dimensional (3D) afterwards. Au x Cu 8-x clusters favor 3D structures till the Au 7 Cu 1 cluster. We have found a lowest energy isomer of Au 6 Cu 2 from the literature. Bond lengths, binding energies, density of states (DOS), highest occupied molecular orbital–lowest unoccupied molecular orbital (HOMO-LUMO) gaps, ionization potential (IP) and electron affinity (EA) have been calculated for these structures using the first principles density functional theory (DFT) within the generalized gradient approximation (GGA) and the local density approximation (LDA). Generally, we have observed the overlap between s electrons of Cu and p electrons of Au near the Fermi level. Charge transfers are calculated by using the Löwdin analysis. It is observed that one Cu atom does not significantly modify the clusters which have more gold atoms. It is also seen that these clusters generally have nonmagnetic properties and results are consistent with the hybridization between s and d orbitals of Au in Au x Cu 8-x clusters.

scholarly journals DFT and TD-DFT Study of [Tris(dithiolato)M]3- Complexes[M= Cr, Mn and Fe]: Electronic Structures, Properties and Analyses

2019 ◽  
Vol 67 (1) ◽  
pp. 63-68
Author(s):  
Mohammad A Matin ◽  
Mohammad Alauddin ◽  
Tapas Debnath ◽  
M Saiful Islam ◽  
Mohammed A Aziz
Keyword(s):  
Experimental Data ◽  
Density Functional Theory ◽  
Charge Transfer ◽  
Metal Ions ◽  
Molecular Orbital ◽  
Density Functional ◽  
Natural Bond Orbital ◽  
Binding Energies ◽  
Functional Theory ◽  
Td Dft

Using Density Functional Theory (DFT) and Time-Dependent Density Functional Theory (TD-DFT) methods, transition metal complexes of benzene-1, 2-dithiolate (L2-) ligand from Cr to Fe have been studied theoretically. The ground state geometries, binding energies, UV-Visible spectra (UV-Vis), frontier molecular orbitals (FMOs) analysis, charge analysis and natural bond orbital (NBO) have been calculated. The structural parameters are in good accord with the experimental data. The metal-ligand binding energies are one (1) order of magnitude higher than the physisorption energy of a benzene-1, 2-dthiolate molecule on a metallic surface. In accordance with experiment the calculated electronic spectra of these tris complexes show bands at 565, 559 and 546 nm for Cr3+, Mn3+, and Fe3+ respectively which are mainly qualified to ligand-to metal charge transfer (LMCT) transitions. The electronic properties analysis demonstrate that the highest occupied molecular orbital (HOMO) is mostly centered on metal coordinated sulfur atoms whereas the lowest unoccupied molecular orbital (LUMO) is mainly located on the metal surface. By calculating natural bond orbital (NBO), the intramolecular interactions and electron delocalization was obtained. The results of NBO analysis illustrated the significant charge transfer from sulfur to central metal ions, as well as to the benzene of the complex. The calculated charges on metal ions are also reported at various charge schemes. The calculations show encouraging agreement with the available experimental data. Dhaka Univ. J. Sci. 67(1): 63-68, 2019 (January)

On the Nature of Halide-Water Interactions: Insights from Many-Body Representations and Density Functional Theory

2019 ◽  
Author(s):  
Brandon B. Bizzarro ◽  
Colin K. Egan ◽  
Francesco Paesani
Keyword(s):  
Density Functional Theory ◽  
Charge Transfer ◽  
Molecular Orbital ◽  
Density Functional ◽  
Decomposition Analysis ◽  
Orbital Energy ◽  
Energy Decomposition Analysis ◽  
Interaction Energies ◽  
Many Body ◽  
Functional Theory

<div> <div> <div> <p>Interaction energies of halide-water dimers, X<sup>-</sup>(H<sub>2</sub>O), and trimers, X<sup>-</sup>(H<sub>2</sub>O)<sub>2</sub>, with X = F, Cl, Br, and I, are investigated using various many-body models and exchange-correlation functionals selected across the hierarchy of density functional theory (DFT) approximations. Analysis of the results obtained with the many-body models demonstrates the need to capture important short-range interactions in the regime of large inter-molecular orbital overlap, such as charge transfer and charge penetration. Failure to reproduce these effects can lead to large deviations relative to reference data calculated at the coupled cluster level of theory. Decompositions of interaction energies carried out with the absolutely localized molecular orbital energy decomposition analysis (ALMO-EDA) method demonstrate that permanent and inductive electrostatic energies are accurately reproduced by all classes of XC functionals (from generalized gradient corrected (GGA) to hybrid and range-separated functionals), while significant variance is found for charge transfer energies predicted by different XC functionals. Since GGA and hybrid XC functionals predict the most and least attractive charge transfer energies, respectively, the large variance is likely due to the delocalization error. In this scenario, the hybrid XC functionals are then expected to provide the most accurate charge transfer energies. The sum of Pauli repulsion and dispersion energies are the most varied among the XC functionals, but it is found that a correspondence between the interaction energy and the ALMO EDA total frozen energy may be used to determine accurate estimates for these contributions. </p> </div> </div> </div>

A DFT study of spherands containing five anisyl groups — Highly preorganized to bind the alkali metal

2006 ◽  
Vol 84 (8) ◽  
pp. 1045-1049 ◽  
Author(s):  
Shabaan AK Elroby ◽  
Kyu Hwan Lee ◽  
Seung Joo Cho ◽  
Alan Hinchliffe
Keyword(s):  
Density Functional Theory ◽  
Binding Energy ◽  
Density Functional ◽  
Ionic Radius ◽  
Binding Energies ◽  
Cavity Size ◽  
X Ray Diffraction ◽  
Functional Theory ◽  
X Ray ◽  
Good Agreement

Although anisyl units are basically poor ligands for metal ions, the rigid placements of their oxygens during synthesis rather than during complexation are undoubtedly responsible for the enhanced binding and selectivity of the spherand. We used standard B3LYP/6-31G** (5d) density functional theory (DFT) to investigate the complexation between spherands containing five anisyl groups, with CH2–O–CH2 (2) and CH2–S–CH2 (3) units in an 18-membered macrocyclic ring, and the cationic guests (Li+, Na+, and K+). Our geometric structure results for spherands 1, 2, and 3 are in good agreement with the previously reported X-ray diffraction data. The absolute values of the binding energy of all the spherands are inversely proportional to the ionic radius of the guests. The results, taken as a whole, show that replacement of one anisyl group by CH2–O–CH2 (2) and CH2–S–CH2 (3) makes the cavity bigger and less preorganized. In addition, both the binding and specificity decrease for small ions. The spherands 2 and 3 appear beautifully preorganized to bind all guests, so it is not surprising that their binding energies are close to the parent spherand 1. Interestingly, there is a clear linear relation between the radius of the cavity and the binding energy (R2 = 0.999).Key words: spherands, preorganization, density functional theory, binding energy, cavity size.

A Density Functional Theory Study on the Ring-Opening Polymerization of D-Lactide Catalyzed by a Bifunctional-Thiourea Catalyst

2009 ◽  
Vol 62 (2) ◽  
pp. 157 ◽  
Author(s):  
Rong-Xiu Zhu ◽  
Ruo-Xi Wang ◽  
Dong-Ju Zhang ◽  
Cheng-Bu Liu
Keyword(s):  
Density Functional Theory ◽  
Ring Opening ◽  
Density Functional ◽  
Population Analysis ◽  
Density Functional Theory Calculations ◽  
Ring Opening Polymerization ◽  
Acyl Transfer ◽  
Frontier Molecular Orbital ◽  
Functional Theory ◽  
Elimination Pathway

The thiourea-catalyzed methanolysis of d-lactide, a model system for the initiation and propagation of the organocatalyzed ring-opening polymerization (ROP) of lactide, has been studied by performing density functional theory calculations. Both the catalyzed and uncatalyzed reactions are explored along two possible pathways: one involves the stepwise addition–elimination pathway and the other is related to the concerted pathway. It is found that the reaction without the presence of the catalyst is difficult because the barrier involved is as high as 176 kJ mol–1. With the aid of a thiourea catalyst, the barrier is reduced to 88 kJ mol–1 with a preference for the stepwise addition–elimination mechanism over the concerted one. The role of the catalyst has been rationalized by analyzing the frontier molecular orbital interactions between the catalyst and substrates and by performing natural population analysis. Finally, another mechanism involving acyl transfer is discussed for the thiourea-catalyzed ROP.

STRUCTURES, ELECTRONIC AND MAGNETIC PROPERTIES OF C20 FULLERENES DOPED TRANSITION METAL ATOMS M@C20 (M = Fe, Co, Ti, V)

2010 ◽  
Vol 21 (12) ◽  
pp. 1469-1477 ◽  
Author(s):  
M. SAMAH ◽  
B. BOUGHIDEN
Keyword(s):  
Density Functional Theory ◽  
Magnetic Moment ◽  
Density Functional ◽  
Binding Energies ◽  
Functional Theory ◽  
Magnetic Dipoles ◽  
Metal Atoms ◽  
Transition Metal Atoms ◽  
Semiconductor Behavior ◽  
Co Doped

Structures, binding energies, magnetic and electronic properties endohedrally doped C 20 fullerenes by metallic atoms ( Fe , Co , Ti and V ) have been obtained by pseudopotential density functional theory. All M @ C 20, except Co @ C 20, are more stable than the undoped C 20 cage. The magnetic moment values are 1 and 2μB. These values and semiconductor behavior give to these compounds interesting feature in several technological applications. Titanium doped C 20 has a same magnetic moment than the isolated Ti atom. Hybridization process in the Co doped C 20 fullerene is most strong than in other doped cages. Electrical and magnetic dipoles calculated in the iron doped C 20 are very strong compared with other clusters.

Iron Chelation by thiocytosine: Investigating electronic and structural features for describing tautomerism and metal chelation processes

2021 ◽  
pp. 1-8
Author(s):  
Azadeh Jafari Rad ◽  
Maryam Abbasi ◽  
Bahareh Zohrevand
Keyword(s):  
Density Functional Theory ◽  
Dft Calculations ◽  
Molecular Orbital ◽  
Density Functional ◽  
Biological Systems ◽  
Iron Chelation ◽  
Structural Features ◽  
Metal Chelation ◽  
Functional Theory

This work was performed regarding the importance of iron (Fe) chelation for biological systems. This goal was investigated by assistance of a model of thiocytosine (TC) for participating in Fe-chelation processes. First, formations of tautomeric conformations were investigated to explore existence of possible structures of TC. Next, Fe-chelation processes were examined for all four obtained tautomers of TC. The results indicated that thiol tautomers could be seen at higher stability than thio tautomers, in which one of such thiol tautomers yielded the strongest Fe-chelation process to build FeTC3 model. As a consequence, parallel to the results of original TC tautomers, Fe-chelated models were found to be achievable for meaningful chelation processes or sensing the existence of Fe in media. Examining molecular orbital features could help for sensing purposes. The results of this work were obtained by performing density functional theory (DFT) calculations proposing TC compounds suitable for Fe-chelation purposes.

Oxygen vacancy migration in CSZ using density functional theory

2008 ◽  
Vol 1122 ◽  
Author(s):  
Byeong-Eon Lee ◽  
Dae-Hee Kim ◽  
Yeong-Cheol Kim
Keyword(s):  
Density Functional Theory ◽  
Oxygen Vacancy ◽  
Density Functional ◽  
Oxygen Vacancies ◽  
Nearest Neighbor ◽  
Functional Theory ◽  
The Third ◽  
Vacancy Migration ◽  
Neighbor Site ◽  
Formation Energies

AbstractWe studied oxygen migration in calcia-stabilized cubic zirconia (CSZ) using density functional theory. A Ca atom was substituted for a Zr atom in a 2×2×2 ZrO2 cubic supercell, and an oxygen vacancy was produced to satisfy the charge neutrality condition. We found that the formation energies of an oxygen vacancy, as a function of its location with respect to the Ca atom, were varied. The relative formation energies of the oxygen vacancies located at the first-, second-, third-, and fourth-nearest-neighbors were 0.0, −0.07, 0.19, and 0.19 eV, respectively. Therefore, the oxygen vacancy located at the second-nearest-neighbor site of the Ca atom was the most favorable, the oxygen vacancy located at the first-nearest-neighbor site was the second most favorable, and the oxygen vacancies at the third- and fourth-nearest-neighbor sites were the least favorable. We also calculated the energy barriers for the oxygen vacancy migration between oxygen sites. The energy barriers between the first and the second nearest sites, the second and third nearest sites, and the third and fourth nearest sites were 0.11, 0.46, and 0.23 eV, respectively. Therefore, the oxygen vacancies favored the first- and second-nearest-neighbor oxygen sites when they drifted under an electric field.

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