Testing the temporal and spatial validity of site-specific models derived from airborne remote sensing of phytoplankton

1995 ◽  
Vol 52 (5) ◽  
pp. 1094-1107 ◽  
Author(s):  
David F. Millie ◽  
Bryan T. Vinyard ◽  
Michael C. Baker ◽  
Craig S. Tucker

Validations of predictive models are necessary for the accurate application of remotely sensed imagery within ecological research and fisheries management. Multiple regression models derived from airborne imagery on 16 May 1990 accurately depicted phytoplankton biomass and turbidity within aquaculture impoundments. To examine their temporal validity, the exact models, as well as identical model forms, were fit to similar imagery and in situ data collected on 20 June 1990. None of the exact models for 16 May accurately predicted in situ data on 20 June; however, model forms were robust for describing in situ variables. To examine their spatial validity, identical model forms were fit to in situ data partitioned among phytoplankton composition and biomass. The fit of the models and the contribution of imagery variables to the models varied among in situ variables. Although imagery variables explained all of the observed variability for turbidity, regression tree modeling indicated that a significant proportion of the variability in chlorophyll distribution both among and within impoundments was explained through both imagery variables and phytoplankton biomass. Consequently, universal models for the airborne remote sensing of water-quality variables in systems having distinct optical signatures is unlikely. Rather, robust site-specific models will need to be developed.

2021 ◽  
Vol 13 (14) ◽  
pp. 2699
Author(s):  
Michela Perrone ◽  
Massimiliano Scalici ◽  
Luisa Conti ◽  
David Moravec ◽  
Jan Kropáček ◽  
...  

Prompt estimation of phytoplankton biomass is critical in determining the ecological quality of freshwaters. Remote Sensing (RS) may provide new opportunities to integrate with situ traditional monitoring techniques. Nonetheless, wide regional and temporal variability in freshwater optical constituents makes it difficult to design universally applicable RS protocols. Here, we assessed the potential of two neural networks-based models, namely the Case 2 Regional CoastColour (C2RCC) processor and the Mixture Density Network (MDN), applied to MSI Sentinel-2 data for monitoring Chlorophyll (Chl) content in three monomictic volcanic lakes while accounting for the effect of their specific water circulation pattern on the remotely-sensed and in situ data relation. Linear mixed models were used to test the relationship between the remote sensing indices calculated through C2RCC (INN) and MDN (IMDN), and in situ Chl concentration. Both indices proved to explain a large portion of the variability in the field data and exhibited a positive and significant relationship between Chl concentration and satellite data, but only during the mixing phase. The significant effect of the water circulation period can be explained by the low responsiveness of the RS approaches applied here to the low phytoplankton biomass, typical of the stratification phase. Sentinel-2 data proved their valuable potential for the remote sensing of phytoplankton in small inland water bodies, otherwise challenging with previous sensors. However, caution should be taken, since the applicability of such an approach on certain water bodies may depend on hydrological and ecological parameters (e.g., thermal stratification and seasonal nutrient availability) potentially altering RS chlorophyll detection by neural networks-based models, despite their alleged global validity.


2021 ◽  
Vol 14 (1) ◽  
pp. 12
Author(s):  
Monica Demetriou ◽  
Dionysios E. Raitsos ◽  
Antonia Kournopoulou ◽  
Manolis Mandalakis ◽  
Spyros Sfenthourakis ◽  
...  

Alterations in phytoplankton biomass, community structure and timing of their growth (phenology), are directly implicated in the carbon cycle and energy transfer to higher trophic levels of the marine food web. Due to the lack of long-term in situ datasets, there is very little information on phytoplankton seasonal succession in Cyprus (eastern Mediterranean Sea). On the other hand, satellite-derived measurements of ocean colour can only provide long-term time series of chlorophyll (an index of phytoplankton biomass) up to the first optical depth (surface waters). The coupling of both means of observations is essential for understanding phytoplankton dynamics and their response to environmental change. Here, we use 23 years of remotely sensed, regionally tuned ocean-colour observations, along with a unique time series of in situ phytoplankton pigment composition data, collected in coastal waters of Cyprus during 2016. The satellite observations show an initiation of phytoplankton growth period in November, a peak in February and termination in April, with an overall mean duration of ~4 months. An in-depth exploration of in situ total Chl-a concentration and phytoplankton pigments revealed that pico- and nano-plankton cells dominated the phytoplankton community. The growth peak in February was dominated by nanophytoplankton and potentially larger diatoms (pigments of 19’ hexanoyloxyfucoxanthin and fucoxanthin, respectively), in the 0–20 m layer. The highest total Chl-a concentration was recorded at a station off Akrotiri peninsula in the south, where strong coastal upwelling has been reported. Another station in the southern part, located next to a fish farm, showed a higher contribution of picophytoplankton during the most oligotrophic period (summer). Our results highlight the importance of using available in situ data coupled to ocean-colour remote sensing, for monitoring marine ecosystems in areas with limited in situ data availability.


2018 ◽  
Vol 11 (2) ◽  
pp. 721-739 ◽  
Author(s):  
Thomas Krings ◽  
Bruno Neininger ◽  
Konstantin Gerilowski ◽  
Sven Krautwurst ◽  
Michael Buchwitz ◽  
...  

Abstract. Reliable techniques to infer greenhouse gas emission rates from localised sources require accurate measurement and inversion approaches. In this study airborne remote sensing observations of CO2 by the MAMAP instrument and airborne in situ measurements are used to infer emission estimates of carbon dioxide released from a cluster of coal-fired power plants. The study area is complex due to sources being located in close proximity and overlapping associated carbon dioxide plumes. For the analysis of in situ data, a mass balance approach is described and applied, whereas for the remote sensing observations an inverse Gaussian plume model is used in addition to a mass balance technique. A comparison between methods shows that results for all methods agree within 10 % or better with uncertainties of 10 to 30 % for cases in which in situ measurements were made for the complete vertical plume extent. The computed emissions for individual power plants are in agreement with results derived from emission factors and energy production data for the time of the overflight.


Irriga ◽  
2021 ◽  
Vol 1 (3) ◽  
pp. 585-598
Author(s):  
Pedro Henrique Jandreice Magnoni ◽  
Cesar De Oliveira Ferreira Silva ◽  
Rodrigo Lilla Manzione

SENSORIAMENTO REMOTO APLICADO AO MANEJO DA IRRIGAÇÃO EM ÁREAS COM ESCASSEZ DE DADOS: ESTUDO DE CASO EM PIVÔ CENTRAL EM ITATINGA-SP*     PEDRO HENRIQUE JANDREICE MAGNONI1; CÉSAR DE OLIVEIRA FERREIRA SILVA1 E RODRIGO LILLA MANZIONE2   1 Departamento de Engenharia Rural, Faculdade de Ciências Agronômicas, Universidade Estadual Paulista", Avenida Universitária, n° 3780, Altos do Paraíso, 18610-034, Botucatu, São Paulo, Brasil,  [email protected]; [email protected]. 2 Departamento de Engenharia de Biossistemas, Faculdade de Ciências e Engenharia, Universidade Estadual Paulista “Júlio de Mesquita Filho”, Rua Domingos da Costa Lopes, 780, CEP 17602496, Tupã – SP, Brasil. E-mail: [email protected]. *Este artigo é proveniente das dissertações de mestrado dos dois primeiros autores.     1 RESUMO   Ferramentas baseadas em sensoriamento remoto possibilitam o monitoramento do balanço hídrico da água em diferentes resoluções espaciais e temporais. Ainda assim, modelos que exigem dados in-situ impossibilitam sua aplicação em áreas com escassez de dados. No sentido de lidar com esse desafio, o presente trabalho apresenta uma abordagem de escolha do momento de irrigar, pelo balanço hídrico da água no solo, baseada em estimativa da evapotranspiração real (ETA) obtida com o uso conjunto de imagens multiespectrais do sensor MSI/SENTINEL-2 e dados de uma estação meteorológica pública. A área de estudo foi um pivô central localizado no munícipio de Itatinga-SP. Para a tomada de decisão do momento de irrigar, com base em um manejo por lâmina de irrigação fixa, foi feita a interpolação da fração evapotranspirativa entre os dias com imagens disponíveis para obter a ETA nos dias sem imagens por meio do seu produto com a evapotranspiração de referência. Essa abordagem captou variações climáticas essenciais para a estimativa do balanço hídrico em dias sem imagem. Destaca-se nessa aplicação conjunta sua capacidade de ser realizada sem necessitar de parâmetros específicos da cultura, do microclima ou do relevo, tornando-se interessante para regiões com escassez de dados.   Palavras-chave:  evapotranspiração, momento de irrigar, agriwater.     MAGNONI, P. H. J.; SILVA, C. O. F.; MANZIONE, R. L. REMOTE SENSING APPLIED TO IRRIGATION MANAGEMENT IN AREAS WITH LACK OF DATA: A CASE STUDY IN A CENTRAL PIVOT IN ITATINGA-SP     2 ABSTRACT   Remote sensing-based tools allow the monitoring of water budgets over different spatial and temporal resolutions. Nevertheless, some models require in situ data, preventing their application in areas with a lack of data. To address this challenge, this work presents an approach for irrigation scheduling, based on soil water budget estimation using actual evapotranspiration (ETA) obtained using MSI/SENTINEL-2 multispectral images and data from a public meteorological station. The study area consisted of a central pivot located in the municipality of Itatinga-SP, Brazil. For decision-making of irrigation scheduling, considering a fixed irrigation rate, the evapotranspiration fraction was interpolated between the days with available images to obtain the ETA on the days without images using its product with the reference evapotranspiration. This approach captured essential climate variations for estimating the water budget on non-image days. Noteworthy in this joint application is its suitability to be performed not requiring crop-, microclimate- or relief-specific parameters, making it useful for regions with a lack of data.   Keywords: evapotranspiration, irrigation scheduling, agriwater.


Sensors ◽  
2019 ◽  
Vol 19 (16) ◽  
pp. 3609 ◽  
Author(s):  
Kyryliuk ◽  
Kratzer

In this study, the Level-2 products of the Ocean and Land Colour Instrument (OLCI) data on Sentinel-3A are derived using the Case-2 Regional CoastColour (C2RCC) processor for the SentiNel Application Platform (SNAP) whilst adjusting the specific scatter of Total Suspended Matter (TSM) for the Baltic Sea in order to improve TSM retrieval. The remote sensing product “kd_z90max” (i.e., the depth of the water column from which 90% of the water-leaving irradiance are derived) from C2RCC-SNAP showed a good correlation with in situ Secchi depth (SD). Additionally, a regional in-water algorithm was applied to derive SD from the attenuation coefficient Kd(489) using a local algorithm. Furthermore, a regional in-water relationship between particle scatter and bench turbidity was applied to generate turbidity from the remote sensing product “iop_bpart” (i.e., the scattering coefficient of marine particles at 443 nm). The spectral shape of the remote sensing reflectance (Rrs) data extracted from match-up stations was evaluated against reflectance data measured in situ by a tethered Attenuation Coefficient Sensor (TACCS) radiometer. The L2 products were evaluated against in situ data from several dedicated validation campaigns (2016–2018) in the NW Baltic proper. All derived L2 in-water products were statistically compared to in situ data and the results were also compared to results for MERIS validation from the literature and the current S3 Level-2 Water (L2W) standard processor from EUMETSAT. The Chl-a product showed a substantial improvement (MNB 21%, RMSE 88%, APD 96%, n = 27) compared to concentrations derived from the Medium Resolution Imaging Spectrometer (MERIS), with a strong underestimation of higher values. TSM performed within an error comparable to MERIS data with a mean normalized bias (MNB) 25%, root-mean square error (RMSE) 73%, average absolute percentage difference (APD) 63% n = 23). Coloured Dissolved Organic Matter (CDOM) absorption retrieval has also improved substantially when using the product “iop_adg” (i.e., the sum of organic detritus and Gelbstoff absorption at 443 nm) as a proxy (MNB 8%, RMSE 56%, APD 54%, n = 18). The local SD (MNB 6%, RMSE 62%, APD 60%, n = 35) and turbidity (MNB 3%, RMSE 35%, APD 34%, n = 29) algorithms showed very good agreement with in situ data. We recommend the use of the SNAP C2RCC with regionally adjusted TSM-specific scatter for water product retrieval as well as the regional turbidity algorithm for Baltic Sea monitoring. Besides documenting the evaluation of the C2RCC processor, this paper may also act as a handbook on the validation of Ocean Colour data.


2020 ◽  
Vol 12 (9) ◽  
pp. 1414
Author(s):  
Victoria M. Scholl ◽  
Megan E. Cattau ◽  
Maxwell B. Joseph ◽  
Jennifer K. Balch

Accurately mapping tree species composition and diversity is a critical step towards spatially explicit and species-specific ecological understanding. The National Ecological Observatory Network (NEON) is a valuable source of open ecological data across the United States. Freely available NEON data include in-situ measurements of individual trees, including stem locations, species, and crown diameter, along with the NEON Airborne Observation Platform (AOP) airborne remote sensing imagery, including hyperspectral, multispectral, and light detection and ranging (LiDAR) data products. An important aspect of predicting species using remote sensing data is creating high-quality training sets for optimal classification purposes. Ultimately, manually creating training data is an expensive and time-consuming task that relies on human analyst decisions and may require external data sets or information. We combine in-situ and airborne remote sensing NEON data to evaluate the impact of automated training set preparation and a novel data preprocessing workflow on classifying the four dominant subalpine coniferous tree species at the Niwot Ridge Mountain Research Station forested NEON site in Colorado, USA. We trained pixel-based Random Forest (RF) machine learning models using a series of training data sets along with remote sensing raster data as descriptive features. The highest classification accuracies, 69% and 60% based on internal RF error assessment and an independent validation set, respectively, were obtained using circular tree crown polygons created with half the maximum crown diameter per tree. LiDAR-derived data products were the most important features for species classification, followed by vegetation indices. This work contributes to the open development of well-labeled training data sets for forest composition mapping using openly available NEON data without requiring external data collection, manual delineation steps, or site-specific parameters.


2015 ◽  
Vol 19 (7) ◽  
pp. 3203-3216 ◽  
Author(s):  
J. Iwema ◽  
R. Rosolem ◽  
R. Baatz ◽  
T. Wagener ◽  
H. R. Bogena

Abstract. The Cosmic-Ray Neutron Sensor (CRNS) can provide soil moisture information at scales relevant to hydrometeorological modelling applications. Site-specific calibration is needed to translate CRNS neutron intensities into sensor footprint average soil moisture contents. We investigated temporal sampling strategies for calibration of three CRNS parameterisations (modified N0, HMF, and COSMIC) by assessing the effects of the number of sampling days and soil wetness conditions on the performance of the calibration results while investigating actual neutron intensity measurements, for three sites with distinct climate and land use: a semi-arid site, a temperate grassland, and a temperate forest. When calibrated with 1 year of data, both COSMIC and the modified N0 method performed better than HMF. The performance of COSMIC was remarkably good at the semi-arid site in the USA, while the N0mod performed best at the two temperate sites in Germany. The successful performance of COSMIC at all three sites can be attributed to the benefits of explicitly resolving individual soil layers (which is not accounted for in the other two parameterisations). To better calibrate these parameterisations, we recommend in situ soil sampled to be collected on more than a single day. However, little improvement is observed for sampling on more than 6 days. At the semi-arid site, the N0mod method was calibrated better under site-specific average wetness conditions, whereas HMF and COSMIC were calibrated better under drier conditions. Average soil wetness condition gave better calibration results at the two humid sites. The calibration results for the HMF method were better when calibrated with combinations of days with similar soil wetness conditions, opposed to N0mod and COSMIC, which profited from using days with distinct wetness conditions. Errors in actual neutron intensities were translated to average errors specifically to each site. At the semi-arid site, these errors were below the typical measurement uncertainties from in situ point-scale sensors and satellite remote sensing products. Nevertheless, at the two humid sites, reduction in uncertainty with increasing sampling days only reached typical errors associated with satellite remote sensing products. The outcomes of this study can be used by researchers as a CRNS calibration strategy guideline.


2017 ◽  
Vol 122 (11) ◽  
pp. 9176-9188 ◽  
Author(s):  
M. Laura Zoffoli ◽  
Zhongping Lee ◽  
Michael Ondrusek ◽  
Junfang Lin ◽  
Charles Kovach ◽  
...  

2020 ◽  
Author(s):  
Verhegghen Astrid ◽  
d'Andrimont Raphaël ◽  
Lemoine Guido ◽  
Strobl Peter ◽  
van der Velde Marijn

<p>Efficient near-real time and wall-to-wall land monitoring is now possible with unprecedented detail because of the fleet of Copernicus Sentinel satellites. This remote sensing paradigm is the consequence of the freely accessible, global, Copernicus data, combined with affordable cloud computing. However, to translate this capacity in accurate products, and to truly benefit from the high spatial detail (~10m) and temporal resolution (~5 days in constellation) of the Sentinels 1 and 2, high quality and timely in-situ data remains crucial. Robust operational monitoring systems are in need of both training and validation data. </p><p>Here, we demonstrate the potential of Sentinel 1 observations and complementary high-quality in-situ data to generate a crop type map at continental scale. In 2018, the Land Cover and Land Use Area frame Survey (LUCAS) carried out in the European Union contained a specific Copernicus module corresponding to 93.091 polygons surveyed in-situ. In contrast to the usual LUCAS point observation, the Copernicus protocol provides data on the extent of homogeneous land cover for a maximum size of 100 x 100 m, making it meaningful for remote sensing applications. After filtering the polygons to retrieve only high quality sample, a sample was selected to explore the accuracy of crop type maps at different moments of the 2018 growing season over Europe. The time series of 10 days VV and VH were classified using Random Forest models. The crops that were mapped correspond to the 13 major crops in Europe and are those that are monitored and forecast by the JRC MARS activities (soft wheat, maize, rapeseed, barley, potatoes, ...). Overall, reasonable accuracies were obtained (~80%). Although no a priori parcel delineation was used, it was encouraging to observe the relative homogeneity of pixel classification results within the same parcel. In the context of forecasting, we specifically assessed at what time in the growing season accuracies moved beyond a set threshold for the different crops. This ranged from May for winter crops such as soft wheat, and September for summer crops such as maize. </p><p>Our results contribute to the discussion regarding the usefulness, benefits, as well as weaknesses, of the newly acquired LUCAS Copernicus data. Doing so, this study demonstrates the potential of in-situ surveys such as LUCAS Copernicus module  specifically targeted for Earth Observation applications. Future improvements to the LUCAS Copernicus survey methodology are suggested. Importantly, now that LUCAS has been postponed to 2022, and aligned with the Copernicus space program, we advocate for a European Union wide systematic and representative in-situ sample campaign relevant for Earth Observation applications, beyond the traditional LUCAS survey. </p>


2005 ◽  
Vol 98 (4) ◽  
pp. 481-493 ◽  
Author(s):  
M MONTESHUGO ◽  
K CARDER ◽  
R FOY ◽  
J CANNIZZARO ◽  
E BROWN ◽  
...  

Sign in / Sign up

Export Citation Format

Share Document