Nucleic Acid Related Compounds. 14. 3′-O-Aminoacyl-2′-O-methyladenosines and 2′-O-Aminoacyl-3′-O-methyladenosines Related to Charged tRNA Termini

1974 ◽  
Vol 52 (22) ◽  
pp. 3803-3813 ◽  
Author(s):  
Morris J. Robins ◽  
Malcolm MacCoss ◽  
G. Ramani

Aminoacyl nucleosides derived from 2′-O-methyladenosine and 3′-O-methyladenosine have been isolated as pure solids and completely characterized for the first time. Coupling of 5′-O-(mono-p-methoxytrityl)-2′-O-methyl- (and 3′-O-methyl-) adenosines (1 and 6, respectively) with N-tert-butyloxycarbonyl(N-tBOC)-amino acid anhydrides (2a–c) (generated insitu from the corresponding N-tBOC-amino acids and N,N′-dicyclohexylcarbodiimide) in the presence of 4-N,N-dimethylaminopyridine gave the 3′-O-(N-tBOC-aminoacyl)-5′-O-(mono-p-methoxytrityl-2′-O-methyladenosines (3a–c) and 2′-O-(N-tBOC-aminoacyl)-5′-O-(mono-p-methoxytrityl-3′-O-methyladenosines (7a–c), respectively, in good yields. The L-leucine (a), L-phenylalanine (b), and L-methionine (c) compounds were prepared in each series. Complete deblocking was effected using 98% formic acid since usual procedures had disadvantages with these molecules. The 3′-O-(L-aminoacyl)-2′-O-methyladenosines (4a–c) and 2′-O-(L-aminoacyl)-3′-O-methyladenosines (8a–c) were obtained in high yields with no detectable hydrolysis of the aminoacyl or glycosidic bonds under these conditions.N-Formylmethionyl and N-acetylphenylalanyl derivatives were prepared in each series by acylation of the deblocked products with acetic formic anhydride and p-nitrophenyl acetate, respectively. Biochemical rationale for the use of these compounds in the study of protein biosynthesis and initiation processes are discussed. The puromycin-like activity of 3′-O-phenylalanyl-2′-O-methyl-adenosine (4b) was confirmed.


2018 ◽  
Author(s):  
Nidhi Gour ◽  
Bharti Koshti ◽  
Chandra Kanth P. ◽  
Dhruvi Shah ◽  
Vivek Shinh Kshatriya ◽  
...  

We report for the very first time self-assembly of Cysteine and Methionine to discrenible strucutres under neutral condition. To get insights into the structure formation, thioflavin T and Congo red binding assays were done which revealed that aggregates may not have amyloid like characteristics. The nature of interactions which lead to such self-assemblies was purported by coincubating assemblies in urea and mercaptoethanol. Further interaction of aggregates with short amyloidogenic dipeptide diphenylalanine (FF) was assessed. While cysteine aggregates completely disrupted FF fibres, methionine albeit triggered fibrillation. The cytotoxicity assays of cysteine and methionine structures were performed on Human Neuroblastoma IMR-32 cells which suggested that aggregates are not cytotoxic in nature and thus, may not have amyloid like etiology. The results presented in the manuscript are striking, since to the best of our knowledge,this is the first report which demonstrates that even non-aromatic amino acids (cysteine and methionine) can undergo spontaneous self-assembly to form ordered aggregates.



2021 ◽  
Author(s):  
Jin-Tian Ma ◽  
Li-Sheng Wang ◽  
Zhi Chai ◽  
Xin-Feng Chen ◽  
Bo-Cheng Tang ◽  
...  

Quinazoline skeletons are synthesized by amino acids catabolism/reconstruction combined with dimethyl sulfoxide insertion/cyclization for the first time. The amino acid acts as a carbon and nitrogen source through HI-mediated catabolism...



ChemInform ◽  
1988 ◽  
Vol 19 (27) ◽  
Author(s):  
F. EFFENBERGER ◽  
C.-P. NIESERT ◽  
J. KUEHLWEIN ◽  
T. ZIEGLER


1991 ◽  
Vol 69 (2) ◽  
pp. 334-338 ◽  
Author(s):  
Stanislaw F. Wnuk ◽  
Morris J. Robins

Treatment of the purified 5′-aldehyde (2a) (derived from 6-N-benzoyl-2′,3′-O-isopropylideneadenosine (1a)) with methylenetriphenylphosphorane and successive deprotection with ammonia and acid gave 9-(5,6-dideoxy-β-D-ribo-hex-5-enofuranosyl)adenine (5′-deoxy-5′-methyleneadenosine) (4). Oxidation of 1a or 2′,3′-O-isopropylideneadenosine (1b) and treatment of the crude 5′-aldehydes (2a or 2b) with (p-toluenesulfonylmethylene)triphenylphosphorane gave high yields of the 5′-deoxy-5′-tosylmethylene derivatives (5a or 5b). Removal of the tosyl group from 5b to give 3b was effected with tributylstannyllithium, but sulfone cleavage by the usual reductive methods failed. Reduction and deprotection of 5a or 5b gave 9-[5,6-dideoxy-6-(p-toluenesulfonyl)-β-D-ribo-hexofuranosyl]adenine (6b). Isomerization of the vinyl tosyl (5b) to a 4′,5′-unsaturated allylic tosyl derivative (7) occurred under cleavage conditions and in solutions of aqueous or organic bases. Key words: adenosine, 5′-deoxyadenosine, 5′-methylene-5′-deoxyadenosine, nucleosides.



Spatial models of the β - structures of protein molecules, forming layers of amino acids, in principle, of unlimited length for both antiparallel and parallel conformation have been constructed. It is shown that the simplified flat Pauling models do not reflect the spatial structure of these layers. Using the recently developed theory of higher-dimensional polytopic prismahedrons, models of the volumetric filling of space with amino acid molecules are constructed. The constructed models for the first time mathematically describe the native structures of globular proteins.



1970 ◽  
Vol 48 (1) ◽  
pp. 163-175 ◽  
Author(s):  
R. M. Genik-Sas-Berezowsky ◽  
I. H. Spinner

Two new chelating monomers, N-(p-vinylbenzenesulfonyl)1,2-diaminoethane-N′,N′-diacetic (SS-EDDA) and -N,N′,N′-triacetic (SS-ED3A) acids, as well as several monomeric analogues and related intermediates have been prepared. In addition, 2-oxo-1-piperazine acetic (S-KP), 3-oxo-1-piperazine acetic (U-KP), and 2-oxo-1,4-piperazine diacetic (3-KP) acids have been synthesized and the interconvertibility between these cyclic amides and their unsubstituted linear amino acid analogues, ethylene-diamine-N,N′-diacetic (S-EDDA), -N,N-diacetic (U-EDDA), and -N,N,N′-triacetic (ED3A) acids respectively, was demonstrated.The acid dissociation constants of the various amino acids were determined potentiometrically at 25° and μ = 0.1 M(KNO3) and the results were compared with the hydrogen ion affinities of related compounds. Dissociation schemes were proposed for all the compounds based on these results. Rationalizations of the linear amino acid and the cyclic amide dissociation constants were made in terms of the effects of cyclization and the inductive effects of neighboring groups. These rationalizations were found to be helpful in clarifying the dissociation schemes previously proposed for several of the linear amino acids.



1956 ◽  
Vol 104 (2) ◽  
pp. 183-191 ◽  
Author(s):  
Kenneth E. Lentz ◽  
Leonard T. Skeggs ◽  
Kenneth R. Woods ◽  
Joseph R. Kahn ◽  
Norman P. Shumway

Preparations of hypertensin II, obtained from the treatment of hypertensin I by the action of the hypertensin converting enzyme of plasma and purified by countercurrent distribution, were quantitatively analyzed for their amino acid content. Chromatography on ion exchange columns showed the presence of equimolar amounts of aspartic acid, proline, valine, isoleucine, tyrosine, phenylalanine, histidine, and arginine. Hypertensin I was found to contain one mole of leucine and one mole of histidine in addition to the amino acids of hypertensin II. These two amino acids were isolated from the conversion products of hypertensin I and identified as the peptide histidylleucine. Carboxypeptidase digestion of hypertensin I showed the carboxyl terminal sequence of amino acids to be residue-phenylalanyl-histidylleucine. Similar studies of hypertensin II demonstrated residue-phenylalanine. It was concluded that the conversion of hypertensin I by the plasma hypertensin converting enzyme involved hydrolysis of the phenylalanyl-histidine bond to form hypertensin II and histidylleucine. The further removal by carboxypeptidase of phenylalanine from hypertensin II destroyed all of the vasoconstrictor activity.



1968 ◽  
Vol 46 (8) ◽  
pp. 797-806 ◽  
Author(s):  
N. Rosa ◽  
A. C. Neish

Shoots of barley seedlings when fed D-phenylalanine convert the amino acid to N-malonylphenylalanine. Some N-acetylphenylalanine is obtained at the same time but this may be an artifact of the isolation procedure since it is readily formed by decarboxylation of the malonylphenylalanine. Feeding experiments with the D- and L-isomers of phenylalanine, valine, leucine, isoleucine, tyrosine, tryptophan, alanine, and glutamic acid showed that barley shoots form the malonyl derivative from all the D-isomers whereas little, if any, is formed from the L-isomers. Similar experiments with phenylalanine and leucine isomers, using seven different plant species, showed that the ability to conjugate the D-isomers (but not the L-isomers) was found in all of the plants tested. It was also observed that the ether-soluble acidic conjugates of a variety of amino acids, possibly malonyl derivatives, occur widely throughout the plant kingdom.



1993 ◽  
Vol 71 (2) ◽  
pp. 192-198 ◽  
Author(s):  
Stanislaw F. Wnuk ◽  
Morris J. Robins

Treatment of the 6′(E)-tosylvinyl homonucleoside 1a with Bu3SnH/AIBN/toluene/Δ gave separable mixtures of 6′-vinylstannanes 2a(E/Z) in high yields. Stereospecific halodestannylations with N-iodosuccinimide, bromine, and N-bromosuccinimide proceeded smoothly to give the 6′(E or Z)-iodo(and bromo) vinyl compounds with retention of configuration. Chlorine or iodobenzene dichloride effected moderately stereoselective chlorodestannylation. Treatment of 2a with NH4F/MeOH/Δ resulted in carbon–tin bond cleavage to give the free vinyl derivative 4a. Aqueous trifluoroacetic acid effected concomitant protiodestannylation and deprotection of 2a to give 4b. Treatment of 2a(E) with lead tetraacetate/acetonitrile and deprotection afforded acetylenic derivative 3b.



Some time ago, two of the authors of the present communication, in seeking a method for the separation of the amino-acids from the carbohydrates, found that under certain conditions the former could be readily separated in the form of the barium salts of their carbamates, a class of compounds originally described by Siegfried. As these carbamates, on heating with water, are readily decomposed into barium carbonate and the free amino-acid, it was suggested that a convenient method might be evolved, using the formation of these compounds as a basis, for the separation of the hydrolysis products of the proteins.* This suggestion was followed up, and a method was subsequently elaborated and applied to the separation of the hydrolysis products of gelatin by one of the authors in conjunction with Miss H. L. Kingston. Since the publication of the two papers just quoted, the researches on the use of the “carbamate method,” as it may be conveniently called, have been continued, and promise results, which may ultimately lead to a satisfactory separation of most of the hydrolysis products of the proteins when only relatively small amounts of material are available for investigation. During the course of this work the base, which is the chief subject discussed in this paper, was discovered.



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