scholarly journals Fibrinogen variant BβD432A has normal polymerization but does not bind knob “B”

Blood ◽  
2009 ◽  
Vol 113 (18) ◽  
pp. 4425-4430 ◽  
Author(s):  
Sheryl R. Bowley ◽  
Susan T. Lord

AbstractFibrinogen residue Bβ432Asp is part of hole “b” that interacts with knob “B,” whose sequence starts with Gly-His-Arg-Pro-amide (GHRP). Because previous studies showed BβD432A has normal polymerization, we hypothesized that Bβ432Asp is not critical for knob “B” binding and that new knob-hole interactions would compensate for the loss of this Asp residue. To test this hypothesis, we solved the crystal structure of fragment D from BβD432A. Surprisingly, the structure (rfD-BβD432A+GH) showed the peptide GHRP was not bound to hole “b.” We then re-evaluated the polymerization of this variant by examining clot turbidity, clot structure, and the rate of FXIIIa cross-linking. The turbidity and the rate of γ-γ dimer formation for BβD432A were indistinguishable compared with normal fibrinogen. Scanning electron microscopy showed no significant differences between the clots of BβD432A and normal, but the thrombin-derived clots had thicker fibers than clots obtained from batroxobin, suggesting that cleavage of FpB is more important than “B:b” interactions. We conclude that hole “b” and “B:b” knob-hole binding per se have no influence on fibrin polymerization.

2013 ◽  
Vol 109 (02) ◽  
pp. 221-228 ◽  
Author(s):  
Keisuke Soya ◽  
Fumiko Terasawa ◽  
Nobuo Okumura

SummaryFibrin polymerisation is mediated by interactions between knobs ‘A’ and ‘B’ exposed by thrombin cleavage, and holes ‘a’ and ‘b’. We demonstrated markedly delayed thrombin-catalysed fibrin polymerisation, through B:b interactions alone, of recombinant γD364H-fibrinogen with impaired hole ‘a’. To determine whether recombinant variant fibrinogens with no release of fibrinopeptide A (FpA) polymerise similarly to γD364H-fibrinogen, we examined two variant fibrinogens with substitutions altering knob ‘A’, Aα17A- and Aα17C-fibrinogen. We examined thrombin- or batroxobin-catalysed fibrinopeptide release by HPLC, fibrin clot formation by turbidity and fibrin clot structure by scanning electron microscopy (SEM) and compared the results of the variants with those for γD364H-fibrinogen. Thrombin-catalysed FpA release of Aα17A-fibrinogen was substantially delayed and none observed for Aα17C-fibrinogen; fibrinopeptide B (FpB) release was delayed for all variants. All variant fibrinogens showed substantially impaired thrombin-catalysed polymerisation; for Aα17A-fibrinogen it was delayed less, and for Aα17C more than for γD364H-fibrinogen. No variants polymerised with batroxobin, which exposed only knob ‘A’. The inhibition of variant fibrinogens’ polymerisation was dose-dependent on the concentration of either GPRP or GHRP, and both peptides that block holes ‘b’. SEM showed that the variant clots from Aα17A- and γD364H-fibrinogen had uniform, ordered fibres, thicker than normal, whereas Aα17C-fibrinogen formed less organised clots with shorter, thinner, and tapered ends. These results demonstrate that FpA release per se is necessary for effective B:b interactions during polymerisation of variant fibrinogens with impaired A:a interactions.


2003 ◽  
Vol 17 (04n06) ◽  
pp. 899-904 ◽  
Author(s):  
A. VECCHIONE ◽  
M. GOMBOS ◽  
C. TEDESCO ◽  
A. IMMIRZI ◽  
L. MARCHESE ◽  
...  

NdSr 2 RuCu 2 O x material has been prepared as polycrystalline powder by solid state reaction. The compound has been investigated by synchrotron x-ray powder diffraction and scanning electron microscopy. The experimental results show that the average crystal structure is a disordered cubic perovskite with Nd and Sr cations occupying the same site and the same substitution is found for Cu and Ru atoms. A comparison between the crystal structure and morphology of this compound and the superconducting tetragonal GdSr 2 RuCu 2 O 8 is also discussed.


Blood ◽  
2006 ◽  
Vol 108 (11) ◽  
pp. 1617-1617
Author(s):  
Veronica H. Flood ◽  
Chandrasekaran Nagaswami ◽  
Irina N. Chernysh ◽  
Hamid A. Al-Mondhiry ◽  
John W. Weisel ◽  
...  

Abstract Cleavage of fibrinopeptide A is the first step in fibrin clot formation, and mutations at the fibrinopeptide A cleavage site are the most common cause of dysfibrinogenemia. We describe here the effect on clot structure of a mutant Aα R16C fibrinogen with defective fibrinopeptide A cleavage (designated fibrinogen Hershey III). The propositus, a young child with mild bleeding symptoms, was found to be heterozygous for the Aα R16C mutation. Fibrinogen was purified from Hershey III and control plasma via glycine precipitation. Hershey III fibrinogen was only 63 ± 10% clottable with thrombin (mean ± SEM), as compared to 96 ± 0.4% for normal fibrinogen. Since the propositus was heterozygous for the mutation, the unclottable portion likely consisted of mutant homodimers, but it was still possible that normal/mutant heterodimers existed. Because the cysteine in the mutant fibrinogen prevents thrombin-mediated fibrinopeptide A cleavage, we hypothesized that incorporation of uncleaved fibrinopeptide A, if present, would affect clot structure. Western blotting was used to evaluate the presence of fibrinopeptide A in clottable and unclottable fibrinogen. For fibrinogen Hershey III, both forms showed a substantial amount of fibrinopeptide A, suggesting that mutant fibrinogen was incorporated into the final clot. No fibrinopeptide A was seen in either the clottable or unclottable fibrinogen from the normal control. Next, fibrin clots were made with thrombin, critical-point dried, and visualized via scanning electron microscopy. Visco-elastic measurements were obtained with a torsion pendulum and clot permeability was compared to that of clots formed with normal fibrinogen. The relative proportions of normal vs. mutant fibrinogen in the clottable and unclottable fibrinogen were assessed by protein sequencing. Scanning electron microscopy showed that the Hershey III clots displayed abnormal architecture with many short fibrin fibrils, consistent with premature fibril termination. Hershey III clots also had thicker fibers, with an average fiber diameter of 182 nm compared to 151 nm for the normal control. A significant difference in clot stiffness (G′), energy dissipated by viscous processes (G″), and permeability (Ks) was seen when fibrinogen Hershey III was compared to a normal control (see table). Protein sequencing of the unclottable Hershey III fibrinogen showed only the homozygous mutant form, while the fibrin clot showed approximately 50% each of the wild-type and mutant fibrinogen chains. These results support the presence of both homodimers and heterodimers in fibrinogen Hershey III, and suggest that incorporation of Aα R16C heterodimers into the fibrin clot leads to defects in fiber formation and clot structure. Mechanical Properties of Hershey III and Control Clots Hershey III Control P G′ (dyne/cm2) 10.8 37.9 0.03 G″ (dyne/cm2) 0.83 2.77 0.04 Tan δ (G″/G′) 0.077 0.076 0.79 Ks (10−7 cm2) 1.86 2.44 0.01


2014 ◽  
Vol 602-603 ◽  
pp. 947-950
Author(s):  
Zhen Wang ◽  
Hai Yan Chen ◽  
Lin Qiang Gao ◽  
Xin Zou

BiFeO3 nanoparticles were successfully synthesized by a hydrothermal method by a mineralizer (KNO3). Structural characterization was performed by thermal analysis, powder X-ray diffraction (XRD) and scanning electron microscopy (TEM).The results showed that the products were perovskite structure BiFeO3 powders. Optimal conditions for the synthesis of single-phase BiFeO3 ceramics were obtained.


2011 ◽  
Vol 332-334 ◽  
pp. 1807-1811 ◽  
Author(s):  
Rui Zhu Zhang ◽  
Yong Wei Gao ◽  
Jian Sheng Wang ◽  
Luke Li ◽  
Wan Shan Su

In this work, Strontium Titanate samples were synthsized by self-propagating high-temperature synthesis (SHS). Sr2+ directly took part in the synthesis process. As a result, immobilization limitation issue is basically resolved. The Strontium titanate was characterized by crystal structure, dense properties, leach rate, microstructure and scanning electron microscopy. And the synthesis process is feasible in technology and economy. It can be concluded that the strontium titanate synroc is a perfect material to immobilize HLW.


2012 ◽  
Vol 44 (3) ◽  
pp. 271-280 ◽  
Author(s):  
Darko Kosanovic ◽  
N. Obradovic ◽  
J. Zivojinovic ◽  
A. Maricic ◽  
V.P. Pavlovic ◽  
...  

In this article the influence of mechanical activation on sintering process of bariumstrontium-titanate ceramics has been investigated. Both non-activated and mixtures treated in a planetary ball mill for 5, 10, 20, 40, 80 and 120 minutes were sintered at 1100-1400?C for 2 hours in presence of air atmosphere. The influence of mechanical activation on phase composition and crystal structure has been analyzed by XRD, while the effect of activation and sintering process on microstructure was investigated by scanning electron microscopy. It has been established that temperature of 1100?C was too low to induce final sintering stage for this system. Electrical measurements have been conducted for the densest ceramics sintered at 1400?C for 2 hours.


Author(s):  
M. Fendorf ◽  
S.W. Keller ◽  
A.M. Stacy ◽  
R. Gronsky

Several new rare earth cuprates having the chemical form RxCuyOz (where R represents the rare earths La, Nd, Sm, Eu, and Gd) have recently been synthesized using a NaOH flux at 400°C. The materials are polycrystalline, and contain varying amounts of R2CuO4 and CuO. During subsequent susceptibility measurements using a SQUID magnetometer, it was found that the Gd material orders antiferromagnetically at approximately 14K, while the other compounds become ferromagnetic between 18K and 28K. Treatment of the powders with 12M HC1 for several minutes dissolves the impurity R2CuO4 and CuO phases, thus facilitating efforts to determine the composition and crystal structure of the new ferromagnetic and antiferromagnetic cuprates. Details of synthesis and magnetic behavior of these materials are to be published elsewhere. In this study, a first attempt is made to characterize the Eu and Gd materials.Energy dispersive x-ray analysis carried out during scanning electron microscopy work indicates that the R:Cu ratio in the Gd material is 1:1.70 (close to 3:5) and that in the Eu material is 1:1.96 (close to 1:2).


2014 ◽  
Vol 2014 ◽  
pp. 1-7
Author(s):  
Tatiana M. Savankova ◽  
Lev G. Akselrud ◽  
Lyudmyla I. Ardanova ◽  
Alexey V. Ignatov ◽  
Eugeni I. Get’man ◽  
...  

Solid solutions of Pb(8−x)Na2Smx(VO4)6O(x/2)were studied using X-ray diffraction analysis including Rietveld refinement and scanning electron microscopy and by measuring their electrical conductivity. Crystal structure of the solid solutions was refined and the solubility region0≤x≤0.2was determined for samarium substitution for lead under the scheme2Pb2++□→2Sm3++O2-. The influence of degree of substitution on the electrical conductivity of solid solutions was established.


2003 ◽  
Vol 82 (2) ◽  
pp. 209-214 ◽  
Author(s):  
J.T. Kloprogge ◽  
D. Visser ◽  
W.N. Martens ◽  
L.V. Duong ◽  
R.L. frost

AbstractThe presence of a magnesian vivianite (Fe2+)2.5(Mg,Mn,Ca)0.5(PO4)2·8H2O, has been identified in a soil sample from a Roman camp near Fort Vechten, The Netherlands, using a combination of Raman microscopy and scanning electron microscopy. An unsubstituted vivianite and baricite were characterised for comparative reasons. The split phosphate-stretching mode is recognised around 1115, 1062 and 1015 cm−1, while the corresponding bending modes are found around 591, 519, 471 and 422 cm−1. The substitution of Mg and Mn for Fe2+in the crystal structure causes a shift towards higher wavenumbers compared to pure vivianite. As shown by the baričite sample substitution causes a broadening of the bands. The observed broadening however is larger than can be explained by substitution alone. The low intensity of the water bands, especially in the OH-stretching region between 2700 and 3700 cm−1indicates that the magnesian vivianite is partially dehydrated, which explains the much larger broadening than the observed broadening caused by substitution of Mg and Mn in vivianite and baričite.


Blood ◽  
2003 ◽  
Vol 102 (7) ◽  
pp. 2466-2471 ◽  
Author(s):  
Jennifer L. Moen ◽  
Oleg V. Gorkun ◽  
John W. Weisel ◽  
Susan T. Lord

Abstract We synthesized BβArg14His fibrinogen with histidine substituted for arginine at the Bβ thrombin-cleavage site. This substitution led to a 300-fold decrease in the rate of thrombin-catalyzed fibrinopeptide B (FpB, Bβ 1-14) release, whereas the rate of FpA release was normal with either thrombin or the FpA-specific enzyme, batroxobin. Both thrombin- and batroxobincatalyzed polymerization of BβArg14His fibrinogen were significantly impaired, with a longer lag time, slower rate of lateral aggregation, and decreased final turbidity. Moreover, desA monomer polymerization was similarly impaired, demonstrating that the histidine substitution itself, and not the lack of FpB cleavage, caused the abnormal polymerization of BβArg14His fibrin. Scanning electron microscopy showed BβArg14His fibrin fibers were thinner than normal (BβArg14His, approximately 70 nm; normal, approximately 100 nm; P < .0001), as expected from the decreased final turbidity. We conclude that the N-terminus of the Bβ chain is involved in the lateral aggregation of normal desAprotofibrils and that the Arg→His substitution disrupts these interactions in BβArg14His fibrinogen. (Blood. 2003;102:2466-2471)


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