scholarly journals Karyotype variability of the Ukrainian Mountain-Carpathian sheep breed

2020 ◽  
Vol 12 (1) ◽  
pp. 3-5
Author(s):  
K. Typylo

Abstract. The main purpose of this work was to describe the karyotype variability of the Ukrainian Mountain-Carpathian sheep breed. Cytogenetic studies were carried out on a group of 25 sheep from that breed. The cultivation of lymphocytes, preparing the cytogenetic samples, classification and registration of chromosome aberrations were held using conventional methods. It was established that the number and structure of the chromosomes of sheep of the Ukrainian Mountain-Carpathian breed correspond to the norm typical for this species of animals. Chromosomal variability of the studied population includes 19.22% of numerical and structural aberrations. By the number and structure of the chromosome set the Ukrainian Mountain-Carpathian sheep breed does not differ from other breeds of sheep. Accurate identification of individual chromosomes with routine coloring allows using cytogenetic studies in breeding practice in sheep breeding.

2012 ◽  
Vol 40 (04) ◽  
pp. 267-270 ◽  
Author(s):  
H. Escobar ◽  
I. Nolte ◽  
N. Reimann-Berg

SummaryFor human tumours there are many reports documenting the correlation between chromosome aberrations and tumour entities. Due to the complex canine karyotypic pattern (78 chromosomes), cytogenetic studies of tumours of the dog are rare. However, the reports in the literature show, that canine chromosome 13 (CFA 13) is predominantly involved in chromosomal changes. Interestingly, CFA 13 shows high homology to regions on the human chromosomes 4 (HSA 4) and 8 (HSA 8), which harbour the proto-oncogenes c-KIT and c-MYC. Both of these genes are involved in the development and progression of some human and canine tumour diseases.


1998 ◽  
Vol 36 (12) ◽  
pp. 3674-3679 ◽  
Author(s):  
Yi-Wei Tang ◽  
Nicole M. Ellis ◽  
Marlene K. Hopkins ◽  
Douglas H. Smith ◽  
Deborah E. Dodge ◽  
...  

Rapid and accurate identification of bacterial pathogens is a fundamental goal of clinical microbiology, but one that is difficult or impossible for many slow-growing and fastidious organisms. We used identification systems based on cellular fatty acid profiles (Sherlock; MIDI, Inc., Newark, Del.), carbon source utilization (Microlog; Biolog, Inc., Hayward, Calif.), and 16S rRNA gene sequence (MicroSeq; Perkin-Elmer Applied Biosystems Division, Foster City, Calif.) to evaluate 72 unusual aerobic gram-negative bacilli isolated from clinical specimens at the Mayo Clinic. Compared to lengthy conventional methods, Sherlock, Microlog, and MicroSeq were able to identify 56 of 72 (77.8%), 63 of 72 (87.5%), and 70 of 72 (97.2%) isolates to the genus level (P = 0.002) and 44 to 65 (67.7%), 55 of 65 (84.6%), and 58 of 65 (89.2%) isolates to the species level (P = 0.005), respectively. FourAcinetobacter and three Bordetella isolates which could not be identified to the species level by conventional methods were identified by MicroSeq. In comparison to the full 16S rDNA sequences, the first 527 bp provided identical genus information for all 72 isolates and identical species information for 67 (93.1%) isolates. These data show that MicroSeq provides rapid, unambiguous identification of clinical bacterial isolates. The improved turnaround time provided by genotypic identification systems may translate into improved clinical outcomes.


Blood ◽  
2012 ◽  
Vol 120 (21) ◽  
pp. 3983-3983 ◽  
Author(s):  
Jeffrey Sawyer ◽  
Erming Tian ◽  
Christoph Heuck ◽  
Qing Zhang ◽  
Janet Lukacs ◽  
...  

Abstract Abstract 3983 In MM, chromosome ploidy levels are commonly used in the cytogenetic risk stratification of the disease. Two distinct ploidy groups occur: a hyperdiploid group, associated with a better prognosis, and a hypodiploid group, associated with a poor prognosis. The hyperdiploid group (47–57 chromosomes) is characterized by a consistent set of odd-numbered chromosomes including trisomies for chromosomes 3,5,7,9,11,15,19, and 21. This group is also characterized by fewer structural aberrations and is found in 50% to 60% of patients with metaphase aberrations. The hypodiploid group (35–45 chromosomes) encompasses clones composed of either hypodiploid, pseudodiploid, and/or near-tetraploid variants. The hypodiploid group has more frequent structural chromosome aberrations involving adverse IGH translocations and deletions of 17p. We have identified a group of 22 patients by routine G-banding with hyperhaploid karyotypes that exhibit a range of 30–34 chromosomes with a modal number of 32. The hyperhaploid clones are characterized by the same set of odd-numbered chromosomes found in hyperdiploid MM, including 3, 5, 7, 9, 11, 15, 19, and 21, however all these chromosomes are found in disomy instead of trisomy. The single notable exception is the retention of chromosome 18 in the hyperhaploid karyotypes. In seventeen of the 22 patients, both a hyperdiploid clone and a hyperhaploid clone were identified in the same sample, with the hyperdiploid clone always representing the dominant cell line. Five patients showed only a hyperhaploid clone. Importantly, both the hyperdiploid and hyperhaploid clones in these patients shared the same set of structural aberrations. This suggests the hyperhaploid karyotypes originated from the hyperdiploid clones by the loss of a single normal copy of each chromosome pair. Chromosome 18 was retained in 18 of 22 patients, and all or part of 1q was retained or newly amplified in five patients. Ten of 22 patients also exhibited the loss or deletion of chromosome 5, which indicates this is an additional secondary event in the hyperhaploid clones. Additionally, we investigated the hyperhaploid clones utilizing fluorescence in-situ hybridization (FISH) and spectral karyotyping in the nine samples that adequate sample was available. FISH probes for IGH rearrangements indicated that only two of the nine cases had IGH translocations, one with a t(4;14), while in the other case a receptor of the IGH signal was not identified. Deletions of 17p (TP53) were found in all nine samples. FISH for 1q21 (CKS1B) was informative in five cases and showed a 1q copy number (CN) of 2 in three cases, of 3 in one case, and of 2–6 in one case. The only recurring structural aberrations identified in the hyperhaploid clones were aberrations of 1q. Segmental disomy for 1q12∼23 was retained in the sole chromosome 1 in two patients (cryptic to G-banding), and whole-arm jumping 1q (JT1q12) was identified in 2 cases. One particularly informative case with a JT1q21 demonstrated a CN of 2–6 for 1q21 and instability of the 1q12 pericentromeric heterochromatin in the form of triradials of 1q. The multi-radials of 1q were the origin of multiple extra acentric copies of 1q and acentric isochromosomes 1q. The findings in this study indicate that a progression of chromosome aberrations exists in hyperhaploid MM just as it does in hyperdiploid and hypodiploid MM. The hyperhaploid clones apparently originate from a single catastrophic event in which an entire haploid set of chromosomes is lost from a hyperdiploid clone, with the striking exception of the retention of chromosome 18. In patients with structural chromosome aberrations, the same set of aberrations is retained in the hyperhaploid cells, including 1q12∼23 amplification. In a subset of patients, these clones may then undergo a loss or deletion of chromosome 5. Finally, hyperhaploid clones can also undergo genomic instability in the form of JT1q12 translocations involving whole-arm CN increases of 1q. The retention of disomy for only chromosome 18 and 1q12∼23 amplification suggests these two specific chromosome aberrations may be important in the survival of these clones. In this group of 22 patients, the median survival time from diagnosis was 32 months, suggesting a poor prognosis for hyperhaploid MM. Disclosures: No relevant conflicts of interest to declare.


2020 ◽  
Vol 7 (Supplement_1) ◽  
pp. S390-S391
Author(s):  
Shelley E Kon ◽  
Sara Giddins ◽  
Irina Yushkevich ◽  
Martin Fuchs ◽  
Amy Irwin ◽  
...  

Abstract Background Urinary tract infections (UTIs) are one of the most common infections, associated with 10.5 million outpatient visits annually. Fast and accurate identification (ID) of bacteria causing a UTI would allow for immediate targeted therapy, as opposed to conventional methods which take one to three days. The Accelerate Pheno® system (ACC, Accelerate Diagnostics Inc., Tucson, AZ, USA) provides microbial ID and susceptibility (AST) from positive blood cultures. Our objective was to determine ACC’s potential to quickly ID bacterial pathogens directly from urine. Methods Remnant urine samples with >100K colony forming units (CFU)/mL of gram-negative bacteria as determined by quantitative plating were obtained from the clinical lab. 1.5ml of urine was dispensed into a capsule and loaded onto the Accelerate PhenoPrep™ module. This module automatically performs wash steps to separate bacteria from human cells and other debris. The processed sample was loaded onto ACC for analysis using a custom designed assay which detects the presence of bacteria and employs an Enterobacteriaceae family specific FISH probe. The results were compared to standard of care ID results. Results There were 10 E. coli and 1 C. koseri among the eleven samples tested. Baseline concentration of samples immediately prior to testing ranged from 2.5 x 106 to 1.08 x 1010 CFU/mL (average 4.19 x 109). After specimen processing, average concentration was 2.14 x 109 CFU/mL and average recovery was 42.83%. ACC detected bacteria and identified it as Enterobacteriaceae in 11/11 samples (100%). Average sample prep time was 55 min. Average time to Enterobacteriaceae ID was 8.6 hrs. Average total time to ID, including specimen processing, was 9.5 hrs. Table 1: Results of Direct from Urine Testing Conclusion ACC identified Enterobacteriaceae directly from remnant urine specimens in an average of 9.5 hours, approximately 24 to 48 hours faster than conventional methods. ACC was able to be adapted for use in urine samples. Future directions include improving the assay to identify bacteria to the species level and adding AST testing. This shows promise in providing fast actionable UTI diagnosis, allowing for tailored antibiotic therapy. *This information concerns a use that has not been approved or cleared by the Food and Drug Administration. Disclosures Martin Fuchs, BSEE, MSEE, Accelerate Diagnostics (Employee) Steve Metzger, BA, Accelerate Diagnostics (Employee)


Author(s):  
E. Islamov ◽  
◽  
G. Kulmanova ◽  
B. Kulataev ◽  
D. Bekbaeva ◽  
...  

This article presents the results of the first stage of research work on the use of the Romney March gene pool of sheep breed based on the laparascopic method of insemination of Kazakh meat-wool semi-fine sheep. The work was performed within the framework of scientific and technical program: "Development of effective methods of selection by branches of animal husbandry for 2018-2020", on task "Development of effective methods of selection in sheep breeding (application of genetics of Romney marsh breed).


1985 ◽  
Vol 27 (5) ◽  
pp. 565-570 ◽  
Author(s):  
C. C. Lin ◽  
M. De Braekeleer ◽  
Heidi Jamro

In a series of 493 apparently consecutive products of spontaneous abortions obtained for cytogenetic studies, tissue culture was attempted in 428 cases; chromosome analysis using the Q-banding technique was completed in 215 cases (50.2%). Abnormal karyotypes were identified in 80 cases (37.2%). Maternal tissue contamination was apparent and the actual frequency of karyotypic abnormal abortuses could be as high as 50%. Comparison of the frequency of a specific type of chromosome abnormalities with nine other series of studies showed the lowest frequency of autosomal trisomies and the highest frequency of triploidies and structural aberrations in the Calgary series. In addition, a significantly lower gestational age was observed for triploidies 69,XXX as compared to the 69,XXY.Key words: abortion, Q-banding, human karyotypes, trisomy, triploidy.


Author(s):  
S. I. Storozhuk ◽  
V. L. Petukhov ◽  
V. A. Andreeva ◽  
E. A. Klimanova ◽  
T. V. Konovalova ◽  
...  

The authors have studied the genetic value of producers of the aboriginal Kulunda finewool sheep breed based on various analysis methods of the productivity of their progeny. The data on 574 offspring (daughters) received from 16 rams-producers of the “Steptoe” breeding farm of Altai Krai were used in the research. The genotypes of ram progeny were evaluated by the productivity of the rams at one year of age. In assessing the fathers, the number of effective daughters needed to confirm a sufficient number of offspring was calculated. Water, soil, and feed were tested for heavy metals content in the sheep breeding area, which did not exceed the MPC (Maximum Permissible Concentration). The breeding indices of the progeny ranged from 114 to 1562. The live weight of the rams was 120 kg. The live weight of the daughters was 50.0 kg. The sheep (daughters) had a wool gain of 5.7 kilograms per ewe. The authors established a high homogeneity of the genotypes of rams producers in terms of the live weight of daughters. The genetic variability of the fathers was 3.2%. According to productivity indices, the rams-producers (#4452, 26133, 3611, 0125 and 44244) occupied the first five ranks. The effect of the genotypes of ram producers on the daughters’ live weight and wool hair gain was established. The ranking data showed the advantage of daughters in several traits obtained from prepotent producers. The authors suggest that ram sires no. 3611, 0125, 26133 and 44244 should be used extensively to improve breeding efficiency. The authors also applied the Hozo method in the absence of normal distribution of traits. In other cases, data processing by methods of variation statistics was used.


2017 ◽  
Vol 54 ◽  
pp. 127-133
Author(s):  
V. V. Dzitsiuk ◽  
M. М. Peredriy

With a closely related pairing a certain part of the genes passes into a homozygous state and is phenotypically displayed. In the descendants of heterozygous carriers of unwanted mutations, the disguised action of dominant alleles disappears, which is the cause of the preservation and spread of harmful recessive alleles in the population. When inbreeding, the formation of homozygous individuals is possible, which will detect the effect of unwanted chromosomal damage in them. The purpose of the research is to evaluate the karyotype variability of the first-born cows of Ukrainian Red-and-White diary breed of different levels of kinship. The object of research was the breeding stock of Ukrainian Red-and-White diary breed, which is breeding in the state enterprise "DG" Khrystynivske" of the Institute of Animal Breeding and Genetics named after M.V.Zubets NAAS. On the basis of the analysis of materials of zootechnical records from computer information management system dairy cattle "Intesel Orsek" selected cows with different degrees of kinship. The cytogenetic analysis was performed in the Department of Genetics and Biotechnology of the Institute of Animal Breeding and Genetics named after M.V.Zubets of NAAS with the use of special techniques and related equipment. For the preparation of chromosomes, the culture of leukocytes of peripheral blood of animals was used. Short-term culture was prepared using Moorhead et al. As a result of studies of the karyotype variability of cows of Ukrainian Red-and-White diary breed of different levels of affinity, no gross constitutional anomalies of the chromosomal set were revealed in any cow. The genomic type anomalies (aneuploidy and polyploidy) and structural aberrations of chromosomes (fragments, ruptures, association of chromosomes) have been identified. The average level of aberrant cells was highest in near-related animals, which is significantly higher than those observed in outbreed cows by 6.0%, with a distant and moderate degree of inbreeding – by 6.4 and 6.7 at P < 0.999 in all cases. The frequency of aneuploidy cells in closely related primates exceeds this rate in outbred animals with an unreliable difference. The same insignificant difference in the level of aneuploid cells is also found between the outbred and inbred individuals from the moderate and remote degree of affinity. The proportion of polyploid cells in all tested cows does not exceed one percent, which is the norm for bovine cattle. The difference between groups of outbred and inbred animals is unreliable. The frequency of cells with chromosomal rupture ranges from 2.31% in cows with distant cows to 5.50% in animals with close inbreeding, on average, and the difference between these indices (3.19%) is statistically significant (P < 0.999), as well as The difference between the outbreed and the animals with moderate inbreeding (P < 0.95). In order to assess the reproductive ability of cows of different degrees of affinity, three groups have been formed taking into account functional disorders of the reproductive system: Group I – animals with the presence of stillbirths and spontaneous miscarriages; II group – cows with a service period after the first lactation for at least 150 days; Group III – cows that have the service period after the first lactation 51–90 days (a conditional control group). Of the 103 studied cytogenetic indices in cows of different degrees of affinity, 24 cows (23.3% of the investigated livestock) were caught in a group of animals with impaired reproductive ability (Group I) The largest share in this group was cows obtained as a result of remote inbreeding (11.6%). In the group of cows with a service period of more than 150 days the most were outbreds (16.5%). In the third group (with the service period at cows 50-90 days), the most outbreed cows and animals obtained as a result of remote inbreeding were found. Their shares were the same and amounted to 8.7% each. Thus, the dependence of the condition of the reproductive system of cows on their affinity is not established. The incidence of cells with genomic disorders and structural aberrations of cows with disturbed reproductive ability, irrespective of the degree of their inbreeding, is 4.2–3.5% higher (P < 0.999) than in cows with normal reproductive function. Outbred and inbred cows have been ranked according to genetic risk levels: low genetic risk (RBD), average genetic risk (SRHR) and high genetic risk (RBD) (Fig. 3). Indicators of the frequency of genomic and chromosomal mutations of the karyotype express the level of general resistance and the potential for the implementation of vital functions of the animal organism. An analysis of the genetic structure of the population according to the level of genetic risk has shown that in the group of low genetic risk, the largest share is cows without abnormalities in the reproductive system. The cytogenetic study of cows allows not only to evaluate the saturation of undesirable aberrations of the chromosomes of this herd of Ukrainian red-billed milk breed, but also allows us to use the results obtained to predict at an early age the reproductive capacity of cows.


Blood ◽  
1966 ◽  
Vol 27 (5) ◽  
pp. 706-714 ◽  
Author(s):  
AMOS NORMAN ◽  
M. S. SASAKI ◽  
R. E. OTTOMAN ◽  
A. G. FINGERHUT

Abstract The frequency of chromosome aberrations in the lymphocytes of 36 hematologically normal women who had received radiation therapy for cervical carcinoma was measured. The decrease with time in the frequency of cells with acentric fragments, of cells with a single dicentric, and of quasidiploid cells can each be represented by a single exponential with an average lifetime, respectively, of 530 ± 64 days, 788 ± 98 days, and 5.55 ± 1.23 x 103 days. Aneuploid cells fall into two classes: One contains no chromosomes with structural aberrations and shows a stable frequency of about 5.8 per cent; the other contains chromosomes with structural aberrations and is eliminated at the same rate as cells with acentric chromosome fragments. The distribution of dicentrics among the lymphocytes at the end of the radiation therapy period is similar to that shown by a population of lymphocytes exposed in vitro to a single dose of about 300 rads.


Genetics ◽  
2020 ◽  
Vol 216 (3) ◽  
pp. 621-631
Author(s):  
Danny E. Miller

The term interchromosomal effect was originally used to describe a change in the distribution of exchange in the presence of an inversion. First characterized in the 1920s by early Drosophila researchers, it has been observed in multiple organisms. Nearly half a century later, the term began to appear in the human genetics literature to describe the hypothesis that parental chromosome differences, such as translocations or inversions, may increase the frequency of meiotic chromosome nondisjunction. Although it remains unclear if chromosome aberrations truly affect the segregation of structurally normal chromosomes in humans, the use of the term interchromosomal effect in this context persists. This article explores the history of the use of the term interchromosomal effect and discusses how chromosomes with structural aberrations are segregated during meiosis.


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