scholarly journals Morphological and molecular characteristics of Kudoa scomberomori (Myxosporea: Kudoidae) firstly foundfrom the muscles of info-pacific king mackerel Scomberomorus guttatus in Quang Binh province, Vietnam

2017 ◽  
Vol 40 (1) ◽  
pp. 1-6
Author(s):  
Nguyen Ngoc Chinh ◽  
Ha Duy Ngo ◽  
Nguyen Huu Duc ◽  
Nguyen Thuy Linh ◽  
Pham Ngoc Doanh

The genus Kudoa includes about 100 described species. In Vietnam, so far, only one species, Kudoa monodactyli, has been reported. During servey for parasites of marine fish in Quang Binh province, Vietnam in 2017, we found Myxozoan samples in 8 out of 15 Indo-Pacific king mackerel (Scomberomorus guttatus). They are identified as K. scomberomori based on the results of morphological and molecular analyses. A great number of individual spores form white pseudocysts with thin membrane within the muscle fibre. The pseudocysts were 0.1-0.3 × 0.4-0.7 mm. The shape of fresh spore like a flower petal. The spore of K. scomberomori was 6.65 ± 0.09 (6.53-6.76) µm in length, 7.42 ± 0.13 (7.29-7.58) µm in width and 6.55 ± 0.11 (6.40-6.65) µm in thickness. Each spore has six shell valves with same size. Each shell valve contained one polar capsule measuring 3.42 ± 0.09 (3.32-3.48) µm in length and 1.30 ± 0.14 (1.14-1.46) µm in width. This is the first report of K. scomberomori in Vietnam and Indo-Pacific king mackerel is recorded as a new host for this species.     Citation: Nguyen Ngoc Chinh, Ha Duy Ngo, Nguyen Huu Duc, Nguyen Thuy Linh, Pham Ngoc Doanh, 2017. Morphological and molecular characteristics of Kudoa scomberomori (Myxosporea: Kudoidae) firstly foundfrom the muscles of info-pacific king mackerel Scomberomorus guttatus in Quang Binh province, Vietnam. Tap chi Sinh hoc, 40(1): x-xx. DOI: 10.15625/0866-7160/v40n1.10671. *Corresponding author: [email protected] Received 13 September 2017, accepted 2 December 2017

2020 ◽  
Vol 11 (1) ◽  
Author(s):  
Gabriele Manzella ◽  
Leonie D. Schreck ◽  
Willemijn B. Breunis ◽  
Jan Molenaar ◽  
Hans Merks ◽  
...  

Abstract Cancer therapy is currently shifting from broadly used cytotoxic drugs to patient-specific precision therapies. Druggable driver oncogenes, identified by molecular analyses, are present in only a subset of patients. Functional profiling of primary tumor cells could circumvent these limitations, but suitable platforms are unavailable for most cancer entities. Here, we describe an in vitro drug profiling platform for rhabdomyosarcoma (RMS), using a living biobank composed of twenty RMS patient-derived xenografts (PDX) for high-throughput drug testing. Optimized in vitro conditions preserve phenotypic and molecular characteristics of primary PDX cells and are compatible with propagation of cells directly isolated from patient tumors. Besides a heterogeneous spectrum of responses of largely patient-specific vulnerabilities, profiling with a large drug library reveals a strong sensitivity towards AKT inhibitors in a subgroup of RMS. Overall, our study highlights the feasibility of in vitro drug profiling of primary RMS for patient-specific treatment selection in a co-clinical setting.


Parasitology ◽  
2004 ◽  
Vol 129 (6) ◽  
pp. 713-721 ◽  
Author(s):  
D.-H. YUN ◽  
Y.-A. BAE ◽  
J.-Y. CHUNG ◽  
S.-Y. KANG ◽  
I. KANG ◽  
...  

To adapt to different environmental conditions between poikilothermic and homeothermic hosts, the plerocercoid ofSpirometra erinacei(sparganum) might express a variety of biologically active molecules. We have identified a 78 kDa glucose-regulated protein of the sparganum (SpGrp78) by differential display of mRNA, employing RNAs each from sparganum adjusted at 9 °C and 37 °C. A full-length cDNA of 2148 bp encodes for a protein of 651 amino acids with a predicted molecular mass of 71 610 Da and shares molecular characteristics with heat-shock protein 70, including a putative ATP binding site, signal peptide cleavage site and endoplasmic reticulum retention signal. Phylogenetic analysis revealed that SpGrp78 was mostly related to those ofEchinococcus multilocularisandE. granulosus. Expression of SpGrp78 mRNA increased approximately 7-fold by inhibition of glycosylation by tunicamycin, 2-fold by temperature-shift from 9 °C to 37 °C and slightly by pH-shift to 4·0 or 5·5. These results suggested that induction of SpGrp78 mRNA is related to the functional role of SpGrp78 as a molecular chaperone when the parasite adapts to a new host environment.


Blood ◽  
2018 ◽  
Vol 132 (Supplement 1) ◽  
pp. 1535-1535
Author(s):  
Mohamad Jawhar ◽  
Konstanze Döhner ◽  
Sebastian Kreil ◽  
Juliana Schwaab ◽  
Khalid Shoumariyeh ◽  
...  

Abstract Systemic mastocytosis with an associated hematologic neoplasm (SM-AHN) is the most common subtype of advanced SM (advSM), diagnosed in up to 80% of patients. The AHN is most frequently diagnosed as a myeloid neoplasm, e.g., SM-MDS/MPNu or SM-CMML. Acquired mutations in KIT (usually KIT D816, KIT D816mut) are detectable in >90% of patients. The basis for the SM-AHN phenotype is usually the multi-lineage involvement, e.g. monocytes, eosinophils and other non-mast cell lineages, of KIT mutations. Core binding factor (CBF) positive AML (CBFpos AML) represents a distinct subtype and is identified in 5-8% of all AMLs. KIT mutations, most frequently KITD816mut, are detectable in up to 45% of CBFpos AML patients and are associated with an adverse prognosis. There is, however, only little information on KIT D816mut/CBFneg AML. We therefore evaluated a) clinical and molecular characteristics, b) response to treatment and, c) survival and prognostic factors in 40 KIT D816mut/CBFneg patients with histologically proven SM and associated AML (SM-AML), collected at 4 centers of the European Competence Network on Mastocytosis (ECNM). Molecular analyses (n=32) revealed at least one additional somatic mutation (median, n=3) apart from KIT D816, most frequently SRSF2 (n=12, 38%), RUNX1 (n=11, 34%), TET2 (n=11, 34%), ASXL1 (n=10, 31%), or NPM1 (n=7, 22%). At least one mutation in SRSF2, ASXL1 or, RUNX1 (S/A/Rpos) was identified in 21/32 (66%) patients. At diagnosis of SM-AML 21/40 (52%) patients had an aberrant karyotype. Secondary AML evolved in 29/40 (73%) patients from SM ± associated myeloid neoplasm and longitudinal molecular analyses revealed acquisition of new somatic mutations (TP53, n=2; NPM1, n=1; RUNX1, n=1, ASXL1, n=1; BCOR, n=1; IDH1/2, n=1) and/or karyotype evolution in 15/16 (94%) patients at the time of SM-AML. Thirty-one of 40 (78%) patients were treated with intensive chemotherapy (ICT) with a complete response (CR) rate of 40%. Allogeneic stem cell transplantation (SCT) was performed in 12/40 (30%) patients with durable CR in 6/12 (50%) patients. S/A/Rpos and/or the presence of a poor-risk karyotype were adverse predictive markers for response to treatment. To further investigate whether KITD816mut/CBFneg AMLdefines a distinct AML subtype associated with SM, two independent AML databases (AMLdatabases) were retrospectively screened and 69 KIT D816mut/CBFneg AML patients identified. The comparison between KIT D816mut/CBFneg SM-AML from ECNM (n=40) centers with KIT D816mut/CBFneg AMLdatabases(n=69) revealed remarkable similarities: a) a high KIT D816 variant allele frequency (VAF) (median 34% vs. 29%), b) with the exception of SRSF2 (38 vs. 18%), a highly similar mutation landscape, rather comparable to that of advSM (Jawhar et al., Blood 2017) than to that of de novo AML, c) in contrast to de novo AML, a low frequency of FLT3 mutations (3 vs. 7%), and d) a high frequency of an aberrant karyotype (52 vs. 42%). The median overall survival (OS) of 40 KIT D816mut/CBFneg SM-AML and 17 evaluable KIT D816mut/CBFneg AMLdatabases was 5.4 (95% confidence interval, CI [1.7-9.1]) and 26.4 (95% CI [0-61.0]) (P=0.015) months, respectively (Figure 1). However, if only the patients with ICT ± allogeneic SCT were compared, median OS between the two groupswas not different (16.7 vs. 26.4 months, P=0.4). In multivariate analyses, S/A/Rpos and a poor-risk karyotype remained the only independent poor-risk factors with regard to OS. These results were independent of treatment modalities. We conclude that KIT D816mut/CBFneg AML is a new poor-risk subtype associated with SM (SM-AML). The remarkable clinical, genetic and prognostic similarities between SM-AML and AMLdatabases suggest that a significant proportion of the AMLdatabases patients may in fact have SM-AML. We therefore strongly recommend to determine serum tryptase and KIT D816 mutation status in all AML patients, and to perform bone marrow histology in KIT D816mut patients. These simple diagnostic measures would allow reclassification to SM-AML and inclusion of KIT inhibitors in established treatment modalities of AML. Disclosures Meggendorfer: MLL Munich Leukemia Laboratory: Employment. Haferlach:MLL Munich Leukemia Laboratory: Employment, Equity Ownership. Döhner:Amgen: Consultancy, Honoraria; Janssen: Consultancy, Honoraria; AROG Pharmaceuticals: Research Funding; Amgen: Consultancy, Honoraria; Novartis: Consultancy, Honoraria, Research Funding; Astellas: Consultancy, Honoraria; Celator: Consultancy, Honoraria; Bristol Myers Squibb: Research Funding; Celator: Consultancy, Honoraria; Sunesis: Consultancy, Honoraria, Research Funding; Seattle Genetics: Consultancy, Honoraria; Jazz: Consultancy, Honoraria; AbbVie: Consultancy, Honoraria; AbbVie: Consultancy, Honoraria; Astex Pharmaceuticals: Consultancy, Honoraria; AROG Pharmaceuticals: Research Funding; Astellas: Consultancy, Honoraria; Agios: Consultancy, Honoraria; Astex Pharmaceuticals: Consultancy, Honoraria; Agios: Consultancy, Honoraria; Bristol Myers Squibb: Research Funding; Jazz: Consultancy, Honoraria; Celgene: Consultancy, Honoraria, Research Funding; Janssen: Consultancy, Honoraria; Celgene: Consultancy, Honoraria, Research Funding; Pfizer: Research Funding; Pfizer: Research Funding; Novartis: Consultancy, Honoraria, Research Funding; Seattle Genetics: Consultancy, Honoraria; Sunesis: Consultancy, Honoraria, Research Funding. Sperr:Novartis: Honoraria; Pfizer: Honoraria; Daiichi Sankyo: Honoraria. Valent:Incyte: Honoraria; Pfizer: Honoraria; Novartis: Honoraria. Reiter:Incyte: Consultancy, Honoraria.


2021 ◽  
Author(s):  
Vinit Kumar ◽  
Kasun M Thambugala ◽  
V Venkatesh Sarma ◽  
R Cheewangkoon ◽  
Ting Chi Wen

Abstract Fungi inhabiting the aerial parts of two mangrove trees, Nypa fruticans, and Rhizophora apiculata, were studied from the central region of Thailand, utilizing morpho-molecular characteristics. Three different fungal taxa were isolated including Rhytidhysteron kirshnacephalus sp. nov., Lasiodiplodia citricola and Striatiguttula phoenicis. Sexual morphs are reported for these three taxa and the asexual morph of Striatiguttula phoenicis is identified based on molecular data. This is the first asexual morph report for the genus Striatiguttula as well as the family Striatiguttulaceae. The new isolate of Striatiguttula phoenicis differs slightly from other extant species in the genus in terms of measurements of ascomata, asci, ascospores, and thickness of peridium. Also, a pigmented hamathecium was observed in this species. The morphological results are congruent to the phylogenetic results of previous studies and support Striatiguttula phoenicis as a new host record from Nypa fruticans. Rhytidhysteron kirshnacephalus was collected from dead twigs of a standing Rhizophora apiculata in Cha-am and it has significant morphological and molecular differences to support its establishment as a novel taxon. Phylogenetically, Rhytidhysteron kirshnacephalus forms a sister clade to Rh. magnoliae, but has different ascomatal characters, including, smooth margins without striations and black pruina. Lasiodiplodia citricola is another species from Cha-am and a new record from Thai mangroves. Detailed descriptions of the isolates, along with their potential ecological roles, are provided. We have also provided the occurrence of fungi from the aerial parts of mangrove trees worldwide.


Phytotaxa ◽  
2017 ◽  
Vol 321 (3) ◽  
pp. 277 ◽  
Author(s):  
GUILLERMO MORERA ◽  
GERARDO ROBLEDO ◽  
VALERIA FERREIRA-LOPES ◽  
CARLOS URCELAY

Morphological and molecular analyses of Fomitiporia neotropica specimens occurring in different native and exotic tree hosts were performed. For molecular analyses we used three markers (LSU, ITS and tef1-α). The molecular analyses revealed the existence of two morphologically similar species. One of them, Fomitiporia impercepta sp. nov., is described here. The phylogenetic position of these species reveals a South American origin and their occurrence on exotic living tree species hints at their capabilities of new host jump events in evolution. These species do not share same hosts suggesting they are not completely generalist wood-decay fungi.


Diversity ◽  
2020 ◽  
Vol 12 (7) ◽  
pp. 285
Author(s):  
Minzi Miao ◽  
Zhun Li ◽  
Eun-A Hwang ◽  
Ha-Kyung Kim ◽  
Hyuk Lee ◽  
...  

Two new benthic freshwater species belonging to the genus Achnanthidium were found in Korea. Achnanthidium ovale sp. nov. and A. cavitatum sp. nov. are described as new species based on light and scanning electron microscopy observations and molecular analyses. Both species are compared with the type material of morphologically similar taxa. Achnanthidium ovale differs from other species belonging to the A. pyrenaicum complex in outline, striation pattern, raphe central endings, and freestanding areolae at the apices. Achnanthidium cavitatum differs from other species in the A. minutissimum complex in outline, broad axial central area in the raphel ess valve, and slit-like areolae near the axial central area. We assessed their molecular characteristics by analyzing nuclear small subunit (SSU) rRNA and chloroplast-encoded rbcL gene sequences. Both the morphological comparison and the SSU and rbcL sequence analyses provide strong evidence to support the recognition of A. ovale and A. cavitatum as new species.


2021 ◽  
Vol 34 (1) ◽  
Author(s):  
AMRUTHA SHYLA SURESH ◽  
BALAMURALI RAGHAVAN PILLAI SREEKUMARAN NAIR ◽  
ARYA UNNI ◽  
BINUMON THANKACHAN MANGALATHETTU

Cymothoid isopods are parasitic crustaceans that cause serious impact on marine fish and might lead to fish mortality and consequently, economic losses. Histopathological alterations caused by Anilocra spp. have not been studied well. This study aims to report the histopathological changes caused by Cymothoid, Anilocra leptosoma Bleeker, 1857 in the skin of Bloch's gizzard shad, Nematalosa nasus (Bloch, 1795). Histopathological examination of processed skin tissues showed changes caused by A. leptosoma, such as hyperplasia and erosions of the epidermis associated dermal oedema and muscle degeneration. The host response also included an aggregation of subepithelial dense sheets of hemosiderin-laden macrophages within the dense mixed inflammatory cells. The cymothoid, A. leptosoma are serious parasites of marine fish that can cause severe economic loss in the commercially important fish species. The present study represents the first record of the parasitic cymothoid, A. leptosoma on N. nasus from India.


2016 ◽  
Vol 19 (1) ◽  
pp. 9 ◽  
Author(s):  
Deden Yusman Maulid ◽  
Mala Nurilmala ◽  
Nurjanah Nurjanah ◽  
Hawis Maddupa

<p>Cytochrome b (cyt b) is one of the genes in mitochondrial DNA that is often used as a molecular<br />marker to identify species through DNA Barcoding. The aim of the present study was to investigate the<br />bioinformatic of cyt b that isolated from mackerel fish. PCR amplification showed the length of DNA cyt<br />b from king mackerel was 803 bp within purine 312 bp and pyrimidine 491 bp while Korean mackerel 791<br />bp within purine 316 bp and pyrimidine 475 bp. Phylogenetic analysis showed all sample join in mackerel<br />groups (Scomberomorus commerson and Scomberomorus koreanus). The Isoelectric point value of cyt b from<br />king mackerel is 6.38 and molecular weight is 29826.23; Korean mackerel are 8.67 and molecular weight is<br />29372.77. Hydrophaty plot showed cyt b of mackerel more hydrophobic. Based on 3D modelling both of<br />them have eight different sections showing by different colors.<br />Keywords: characteristic molecular, cytochrome b, Mackerel<br /><br /></p>


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