scholarly journals Utilization of the fish ladder at the Engenheiro Sergio Motta Dam, Brazil, by long distance migrating potamodromous species

2007 ◽  
Vol 5 (2) ◽  
pp. 197-204 ◽  
Author(s):  
Sérgio Makrakis ◽  
Maristela Cavicchioli Makrakis ◽  
Ricardo Luiz Wagner ◽  
João Henrique Pinheiro Dias ◽  
Luiz Carlos Gomes
Keyword(s):  
Lower Pool ◽  
Abundant Species ◽  
Future Research ◽  
Southern Brazil ◽  
Migratory Species ◽  
Long Distance ◽  
Sampling Protocol ◽  
Fish Ladder ◽  
Upper Pool ◽  
Number Of Individuals

Utilization of the fish ladder installed at the Engenheiro Sergio Motta Dam (also known as Porto Primavera) on the Paraná River, Southern Brazil, by long-distance migrating potamodromous species (sampling Protocol I), and ascending and descending movements (Protocol II) were evaluated. Three pools along the fish ladder (designated as lower, middle, and upper) were sampled monthly between December, 2004 and March, 2005 to determine the abundance of species in the ladder. The ascending and descending movements of the species in the ladder were also analyzed in the same period. In the samples for both protocols, 37 species representing 17 families and 5 orders (Characiformes, Siluriformes, Perciformes, Gymnotiformes, and Myliobatiformes) were recorded. Characiformes were represented by 21 species. Long- distance migratory species (11 species) predominated in the ladder (60% of the total number of individuals), with high abundance of Rhinelepis aspera (5645 individuals). For protocol I, mean abundance varied greatly among the months and pools, with lowest values in December and March for all pools, and highest in January for the lower pool due to high capture of R. aspera. Fish abundance declined from the lower to the upper pool, especially for R. aspera and Rhaphiodon vulpinus. For Protocol II, 17 species were recorded ascending the ladder, where Astyanax altiparanae and Leporinus friderici were the most abundant species (684 and 111 individuals, respectively). However, 18 species showed descending movements, with high captures of Metynnis maculatus and A. altiparanae (339 and 319 individuals, respectively). Twelve species (52%) moved in both directions, and among the seven migratory species sampled, four were recorded ascending and descending, and three species only ascending the ladder. The fish ladder appears to selectively favor species with high swimming capabilities. A discussion is presented on the requirements for future research on attraction to the fish ladder entrance, downstream movements, fish utilization of the ladder, and impacts on spawning and rearing habitat both upstream and downstream of the dam.

scholarly journals The use of morphometric analysis to predict the swimming efficiency of two Neotropical long-distance migratory species in fish passage

2012 ◽  
Vol 10 (4) ◽  
pp. 797-804 ◽  
Author(s):  
Lucileine de Assumpção ◽  
Maristela Cavicchioli Makrakis ◽  
Sergio Makrakis ◽  
Ricardo Luiz Wagner ◽  
Patrícia Sarai da Silva ◽  
...  
Keyword(s):  
Swimming Performance ◽  
Hydroelectric Power Plant ◽  
Fish Passage ◽  
Hydroelectric Power ◽  
Migratory Species ◽  
Long Distance ◽  
Prochilodus Lineatus ◽  
Fish Ladder ◽  
Swimming Efficiency ◽  
Ascent Time

This study investigated the external body morphology (based on morphometric data) and the swimming efficiency in fish passages (based on the ascent time in a fish ladder) of two Neotropical long-distance migratory species. The fish were collected in the fish ladder of the Porto Primavera Hydroelectric Power Plant (known as Engenheiro Sergio Motta), upper Paraná River, Brazil. The species differ in several morphometric ratios related to swimming performance. Prochilodus lineatus exhibited a higher muscle ratio and caudal fin length ratio. However, Leporinus elongatus showed higher values for the fineness ratio, a higher length from snout to pectoral fin base ratio, and a higher caudal peduncle depth factor. Although both species show good swimming performance, the characteristics listed above may enable L. elongatus to apply greater power and propulsion, allowing it to reach a high swimming speed and to exhibit greater efficiency than P. lineatus. Leporinus elongatus moves faster than P. lineatus and has a lower mean ascent time (1.39 hours) than P. lineatus (3.76 hours). Prochilodus lineatus would require a somewhat longer time to pass through the fish ladder.

scholarly journals The Canal da Piracema at Itaipu Dam as a fish pass system

2007 ◽  
Vol 5 (2) ◽  
pp. 185-195 ◽  
Author(s):  
Sérgio Makrakis ◽  
Luiz Carlos Gomes ◽  
Maristela Cavicchioli Makrakis ◽  
Domingo Rodriguez Fernandez ◽  
Carla Simone Pavanelli
Keyword(s):  
Abundant Species ◽  
Migratory Species ◽  
Long Distance ◽  
Pass System ◽  
Prochilodus Lineatus ◽  
Fish Stocks ◽  
Fish Pass ◽  
Iheringichthys Labrosus ◽  
Search For Information ◽  
Abundance And Distribution

The Canal da Piracema is the longest (nearly 10 km) fish pass system in the world. The construction of this fish pass was somehow controversial, because it connected two distinct ichthyofaunistic provinces. This study evaluated the ichthyofauna present in the Canal da Piracema and the abundance and distribution of long-distance migratory fish species along this fish pass system (evaluated possible selectivity). The Canal da Piracema was shown to be difficult to sample because of its environmental heterogeneity: artificial ponds, ladders and nature-like fish pass. To solve this problem, we used several fishing gears, adequate for the several biotopes present (unstructured and structured littoral were sampled with seining nets and electrofishing; lentic were sampled with gillnets and longlines (deeper areas); and rapid water areas were sampled with cast nets). The ichthyofauna of the Canal da Piracema followed the pattern for South America and the Paraná River, with a predominance of Characiformes and Siluriformes. The most representative families were Characidae, Anostomidae, Pimelodidae and Loricariidae. We captured 116 species (17 were long-distance migratory) during the period studied. Small-sized species were predominant in unstructured and structured littoral areas, especially Bryconamericus exodon and Apareiodon affinis.The most abundant species was Hypostomus spp. in lentic areas, followed by Iheringichthys labrosus. Hoplias aff. malabaricus predominated in deeper lentic areas. Long-distance migratory species were abundant in rapid waters; they were Prochilodus lineatus and Leporinus elongatus. The sharp reduction in the number of species, including migratory ones, is an indication that the Canal da Piracema is selecting the species that ascend it. Therefore, the search for information on the efficiency of the various fish passes present in the Canal da Piracema is fundamental, to facilitate upward movements of fish. If this is reached, this polemic fish pass has the potential to contribute to the conservation of fish stocks in Itaipu Reservoir and upstream stretches, because of the presence of spawning and development (nurseries) areas for migratory species.

scholarly journals Do the assemblages of benthic macroinvertebrates in nearshore waters of Western Australia vary among habitat types, zones and seasons?

2005 ◽  
Vol 85 (2) ◽  
pp. 217-232 ◽  
Author(s):  
M.D. Wildsmith ◽  
I.C. Potter ◽  
F.J. Valesini ◽  
M.E. Platell
Keyword(s):  
Species Composition ◽  
Benthic Macroinvertebrates ◽  
Habitat Type ◽  
Abundant Species ◽  
Subtidal Zone ◽  
Habitat Types ◽  
Environmental Characteristics ◽  
Deposit Feeding ◽  
Number Of Individuals

Benthic macroinvertebrates were sampled seasonally in the subtidal and upper and lower swash zones at two sites in each of six nearshore habitat types on the lower west coast of Australia. The habitat types, which differed mainly in the extent of their exposure to wave activity and whether sea grass and/or nearshore reefs were present, had been distinguished quantitatively using values for a suite of seven statistically-selected enduring environmental characteristics (Valesini et al., 2003). The core samples yielded 121 species representing eight phyla, among which the Polychaeta, Malacostraca and Bivalvia were the most speciose classes, contributing ∼38, 23 and 10%, respectively, to the total number of individuals. The total number of species and mean density of macroinvertebrates at the most protected habitat type (1), i.e. 70 and 209·2 individuals 0·1 m−2, respectively, were far greater than in any other habitat type. Habitat type influenced species composition to a greater extent than either zone or season. Furthermore, the extents of the differences among the species compositions of the six habitat types statistically matched the extents of the differences among the values for the suite of enduring environmental characteristics that distinguished each of those habitat types. Overall, the species composition at habitat type 1 was the most distinct, containing five abundant species of polychaetes that were adapted to deposit-feeding in calm waters with high levels of organic material and which were rare in all other habitat types. In contrast, the fauna at the most exposed habitat type was characterized by four crustacean species and a species of bivalve and polychaete, whose mobility and tough external surface facilitated their survival and feeding in turbulent waters. The zonal differences in faunal compositions among habitat types were greatest in the case of the subtidal zone. The faunal compositions differed among zones and seasons only at the most protected habitat type.

Archaic Origins of the Lowland Maya

2010 ◽  
Vol 21 (3) ◽  
pp. 312-352 ◽  
Author(s):  
Jon C. Lohse
Keyword(s):  
Cultural Change ◽  
New Technologies ◽  
Cultural Practices ◽  
Future Research ◽  
Late Archaic ◽  
Long Distance ◽  
Radiocarbon Data ◽  
Cultural Origins ◽  
Lines Of Evidence ◽  
Lowland Maya

The earliest Lowland Maya are commonly recognized by permanent architecture and the appearance of pottery. However, when other lines of evidence are considered, strong continuities with late Archaic populations can be seen. Reconciling these views relies on more than simply gathering more data. It is also necessary to consider the effect of decades of scholarship that defines the precolumbian Maya as “civilization” rather than considering the historical contexts of important transitions, such as the one that culminated with sedentism, the adoption of new technologies, and participation in long-distance exchange. The Archaic-to-Preclassic transition was relatively brief and largely obscured by the practices of establishing permanent dwellings. Nevertheless, this period must have been extremely dynamic and marked by significant cultural change, making it important to researchers interested in early Mesoamerica. Using three lines of evidence—subsistence, economy and technology, and stratigraphically controlled radiocarbon data—this article argues that the Lowland Maya had their cultural origins at least in the late Archaic and that the case for pottery before ca. 1000 B.C. remains uncertain. Future research is needed to determine precisely how far back in time certain cultural practices that characterize Preclassic and Classic Maya society can be documented.

scholarly journals The movement ecology of seagrasses

2014 ◽  
Vol 281 (1795) ◽  
pp. 20140878 ◽  
Author(s):  
Kathryn McMahon ◽  
Kor-jent van Dijk ◽  
Leonardo Ruiz-Montoya ◽  
Gary A. Kendrick ◽  
Siegfried L. Krauss ◽  
...  
Keyword(s):  
Life History ◽  
Clonal Growth ◽  
Movement Ecology ◽  
Future Research ◽  
The Novel ◽  
Long Distance ◽  
Spatial And Temporal Scales ◽  
Life History Stages ◽  
Research Areas ◽  
Time Movement

A movement ecology framework is applied to enhance our understanding of the causes, mechanisms and consequences of movement in seagrasses: marine, clonal, flowering plants. Four life-history stages of seagrasses can move: pollen, sexual propagules, vegetative fragments and the spread of individuals through clonal growth. Movement occurs on the water surface, in the water column, on or in the sediment, via animal vectors and through spreading clones. A capacity for long-distance dispersal and demographic connectivity over multiple timeframes is the novel feature of the movement ecology of seagrasses with significant evolutionary and ecological consequences. The space–time movement footprint of different life-history stages varies. For example, the distance moved by reproductive propagules and vegetative expansion via clonal growth is similar, but the timescales range exponentially, from hours to months or centuries to millennia, respectively. Consequently, environmental factors and key traits that interact to influence movement also operate on vastly different spatial and temporal scales. Six key future research areas have been identified.

scholarly journals Comparing on site human and video counts at Igarapava fish ladder, south eastern Brazil

2006 ◽  
Vol 4 (2) ◽  
pp. 291-294 ◽  
Author(s):  
Mark D. Bowen ◽  
Simone Marques ◽  
Luiz G. M. Silva ◽  
Volney Vono ◽  
Hugo P. Godinho
Keyword(s):  
Fish Species ◽  
Accurate Method ◽  
Fish Passage ◽  
Southeastern Brazil ◽  
Human Observer ◽  
Full Spectrum ◽  
Prochilodus Lineatus ◽  
Number Of Species ◽  
Fish Ladder ◽  
Number Of Individuals

On site human observations and video images were collected and compared at the window of the Igarapava Dam fish ladder (IDFL), rio Grande , Southeastern Brazil, between March 1st and June 30th, 2004. We conducted four experiments with two humans (Observer 1 and Observer 2) observing fish passage in the IDFL window while a Sony 3CCD video camera (Observer 3) recorded fish passage at the same time. Experiments, each one hour in length, were distributed throughout the diel cycle using full spectrum lights. We identified fish species, the number of individuals for each species, and the real time that they passed. Counts from each human observer were compared to the video counts. The fish species most commonly observed in the window were - curimba (Prochilodus lineatus), mandi-amarelo (Pimelodus maculatus), piau-três-pintas (Leporinus friderici) and ferreirinha (Leporinus octofasciatus). The number of species and individuals were indistinguishable for the three observers. But, the number of species and individuals were significantly different among experiments. Thus, the three observers register the same number of species and count the same number of individuals even when these two response variables differ significantly among experiments. Based on these results, we concluded that the video count was an accurate method to assess fish passage at the IDFL.

scholarly journals Birds facing climate change: a qualitative model for the adaptive potential of migratory behaviour

2015 ◽  
Vol 85 (1) ◽  
pp. 3 ◽  
Author(s):  
Michelangelo Morganti
Keyword(s):  
Climate Change ◽  
Phenotypic Plasticity ◽  
Migratory Birds ◽  
Future Research ◽  
Qualitative Model ◽  
Migratory Behaviour ◽  
Adaptive Potential ◽  
Long Distance ◽  
Genetic Determination ◽  
Recent Climate

Recent climate change is altering the migratory behaviour of many bird species. An advancement in the timing of spring events and a shift in the geographical distribution have been detected for birds around the world. In particular, intra-Palearctic migratory birds have advanced arrivals in spring and shortened migratory distances by shifting northward their wintering grounds. These changes in migratory patterns are considered adaptive responses facilitating the adjustment of the life cycle to the phenological changes found in their breeding areas. However, in some cases, populations exposed to the same selective pressures do not show any appreciable adaptive change in their behaviour. Basing on the comparison of realized and non-realized adaptive changes, I propose here the formulation of a qualitative model that predicts the potential of migratory birds populations to change adaptively their migratory behaviour. The model assumes that the adaptive potential of migratory behaviour is fuelled by both genetic diversity and phenotypic plasticity. Populations of long-distance migrants are exposed to strong environmental canalization that largely eroded their phenotypic plasticity and reduced genetic variability, so that they show a very low amount of adaptive potential regarding migratory behaviour. On the contrary, partial-migrant populations have a highly varied genetic profile and are more plastic at the phenotypic level, and consequently show the highest amount of adaptive potential. Species with mainly social and mainly genetic determination of the migratory behaviour are separately treated in the model. Specific empirical models to foresee the adaptive strategies of wild bird populations that face to climate change can be derived from the general theoretical model. As example, a specific model about the shortening of migratory distances in Western European migratory bird is presented. Finally, a number of future research lines on the topic of adaptive potential of migratory behaviour are discussed, including some examples of concrete study cases. In conclusion, partial-migration emerge as the less known system and future research efforts on this topic are expected to be especially fruitful.

scholarly journals RNA Motifs and Modification Involve in RNA Long-Distance Transport in Plants

2021 ◽  
Vol 9 ◽  
Author(s):  
Tao Wang ◽  
Xiaojun Li ◽  
Xiaojing Zhang ◽  
Qing Wang ◽  
Wenqian Liu ◽  
...  
Keyword(s):  
Rna Binding ◽  
Rna Binding Proteins ◽  
Future Research ◽  
Rna Transport ◽  
Long Distance ◽  
Rna Motifs ◽  
Related Sequence ◽  
Long Distance Transport ◽  
Nucleotide Mutation ◽  
Distance Transport

A large number of RNA molecules have been found in the phloem of higher plants, and they can be transported to distant organelles through the phloem. RNA signals are important cues to be evolving in fortification strategies by long-distance transportation when suffering from various physiological challenges. So far, the mechanism of RNA selectively transportation through phloem cells is still in progress. Up to now, evidence have shown that several RNA motifs including Polypyrimidine (poly-CU) sequence, transfer RNA (tRNA)-related sequence, Single Nucleotide Mutation bound with specific RNA binding proteins to form Ribonucleotide protein (RNP) complexes could facilitate RNA mobility in plants. Furthermore, some RNA secondary structure such as tRNA-like structure (TLS), untranslation region (UTR) of mRNA, stem-loop structure of pre-miRNA also contributed to the mobility of RNAs. Latest researchs found that RNA methylation such as methylated 5′ cytosine (m5C) played an important role in RNA transport and function. These studies lay a theoretical foundation to uncover the mechanism of RNA transport. We aim to provide ideas and clues to inspire future research on the function of RNA motifs in RNA long-distance transport, furthermore to explore the underlying mechanism of RNA systematic signaling.

scholarly journals Targeted Next Generation Sequencing Reveals a Third Breakpoint Cluster Region and New Partner Genes in the KMT2A Recombinome

Blood ◽  
2021 ◽  
Vol 138 (Supplement 1) ◽  
pp. 3327-3327
Author(s):  
Claus Meyer ◽  
Patrizia Larghero ◽  
Bruno Lopes ◽  
Aurélie Caye-Eude ◽  
Hélène Cavé ◽  
...  
Keyword(s):  
Transcription Factors ◽  
Multiplex Pcr ◽  
Conflicts Of Interest ◽  
Future Research ◽  
Striking Difference ◽  
Elongation Complex ◽  
Long Distance ◽  
Acute Leukemias ◽  
Breakpoint Cluster Region ◽  
Cluster Region

Abstract Chromosomal rearrangements of the KMT2A gene are associated with acute leukemias and myelodysplastic syndromes. The large number of known KMT2A fusions (>100) renders a precise diagnosis a demanding task. More than 50% of all KMT2A partner genes have been analyzed at the DCAL, including the novel partner genes BCAS4, FAM13A, RANBP3, and STK4. Even though all KMT2A rearrangements are associated with high-risk acute leukemia, the outcome (poor or very poor) is influenced by the partner gene. So far, we have analyzed more than 3,200 patients positive for a KMT2A rearrangement. The breakpoints of these cases are located mainly in the major breakpoint cluster region (bcr1) and to a small extent in the recently described minor bcr (bcr2). A small number of breakpoints were also found outside of these two bcrs. Most of these patients were analyzed by long distance inverse (LDI)- or multiplex-PCR which only cover bcr1. More recently, we used targeted KMT2A-NGS with whole gene coverage in over 450 patients, which was initially applied selectively in patients negative by LDI- and multiplex-PCR and then used more widely. Within the KMT2A-NGS group, 410 patients had bcr1 breakpoints mainly between the KMT2A exons 7 and 13, while 46 patients bcr2 breakpoints mainly between exons 20 and 24. Of note, five patients had their breakpoint outside of these two bcrs: three of them within intron 2 and no functional KMT2A rearrangement; the other two within intron 35 and intron 36, fusing almost the whole KMT2A gene in frame to the respective partner genes ARHGEF12 and MLLT4. These two breakpoints may define a third and rare bcr (bcr3), although further cases are needed to support this hypothesis. Interestingly, 70 patients displayed a 3'-KMT2A deletion, indicating that the number of terminal deletions is higher than described previously. Two patients had a 5'-KMT2A deletion. All deletions started or ended in bcr1 and bcr2. We also observed a striking difference in the distribution of partner genes between bcr1 and bcr2. The most frequent translocation partners fused to bcr1 sites are transcription factors, while the partner genes linked to bcr2 sites generally code for cytosolic proteins. In bcr1, the 4 most frequent partner genes AFF1, MLLT3, MLLT1, and MLLT10, found in 80% of cases, all code for transcription factors that are part of the super elongation complex (SEC). These fusions therefore all lead to disruption of the hematopoietic lineage commitment. In contrast in bcr2, 3 partner genes USP2, MLLT4, and USP8 account for 85% of the cases. USP2 and USP8 are ubiquitin specific peptidases involved in cell signaling and exclusively fused to bcr2 in KMT2A. While MLLT4 is found as a partner in bcr1, bcr2 and bcr3 fusions; unlike other recurrent KMT2A partners linked to bcr1, it is not a transcription factor and it exerts oncogenic potential via dimerization like other cytosolic partners. We hypothesize that the oncogenic properties of USP2 and USP8 are dependent on dimerization like MLLT4 and that the most frequent fusions involving at different bcrs favor different oncogenic mechanisms: bcr1 transactivation and bcr2 dimerization. Further studies are needed to explain why USP2 and USP8 are exclusively associated with bcr2, and why the most frequent partner genes AFF1 and MLLT3 of the bcr1 are less frequent in bcr2. In conclusion, targeted NGS combined with bioinformatic analysis has expanded our knowledge of the KMT2A recombinome to include more fusion partners and has generated new hypotheses for future research on oncogenic mechanisms. Disclosures No relevant conflicts of interest to declare.

scholarly journals Richness and abundance of anurans (amphibia) in pasture and secondary forest areas near to Porto Velho (Rondonia, Brazil)

2016 ◽  
Vol 8 (1) ◽  
pp. 7
Author(s):  
MILENE DA ROCHA M. ◽  
CRISTIANO RIBEIRO F. ◽  
RANIERE GARCEZ C.S.
Keyword(s):  
Secondary Forest ◽  
Abundant Species ◽  
Secondary Forests ◽  
Lack Of Information ◽  
Environmental Integrity ◽  
Pasture Area ◽  
Tools And Techniques ◽  
Number Of Individuals ◽  
The City ◽  
Porto Velho

The Amazon has a great biodiversity, however in this regions some locations still without no research, showing the need for studies in this localities. The lack of information about the diversity of frogs and the speed of change in the landscape that have been taking place on the planet, demonstrates the urgent need to preserve the remaining resources. In this adverse scenario, live frogs that are sensitive to changes in natural forest areas, and are recognized as Bioindicator of environmental integrity. The present study had scoped to do a survey of the anuran species in a country area, near to the city of Porto Velho (RO). This land, is formed by two separate areas, one classified as secondary forests and the other as pasture area. The sampling was carried out from January to may 2012, using tools and techniques for catch in the night delimited by time, pitfall traps and frogs occasional meetings Were captured 63 specimens of Anurans, distributed in six families, where the richest in species were the Leptodactylidae (n = 6), Hylidae (n = 5), Bufonidae (n = 4), Microhylidae (n = 2), Brachycephalidae (n = 2) and Aromobatidae (n = 2), totaling 21 species identified.The most abundant species were the Leptodactylus chaquensis (n = 12) and Leptodactylus andreae (n = 8). The pasture area exhibited the greatest number of individuals captured with 65.07% of all frogs collected.

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