Creating Amylose-Free Barley Cultivars with High Soluble Sugar Content By Genome Editing
Abstract Background Amylose biosynthesis is strictly associated with granule-bound starch synthase I (GBSSI) encoded by the Waxy gene. Waxy barley has extensive prospects for application in functional food development and the brewing industry; however, amylose-free waxy barleys are relatively scarce in nature. Results Here we created new alleles of the Waxy gene using CRISPR/Cas9 genome editing. Mutagenesis of single bases in these novel alleles caused absence of intact waxy protein in grain of the edited line. Consequently, B-type granules disappeared. The amylose and amylopectin contents of the edited line were zero and 31.73%, while those in the wild type (WT) were 33.50% and 39.00%, respectively. The absence of waxy protein led to increase in soluble sugar content to 37.30% compared with only 10.0% in the WT. Typical soluble sugars, sucrose and β-glucan, were 39.16% and 35.40% higher in the edited line than in the WT, respectively. Transcriptome analysis identified differences between the edited line and the WT that could partly explain the reduction in amylose and amylopectin contents and the increase in soluble sugar, sucrose and β-glucan contents. Conclusions The barley cultivar with novel alleles of the Waxy gene contained zero amylose, lower amylopectin, and higher soluble sugar, sucrose and β-glucan than the wild type. This new cultivar provides a good germplasm resource for improving the quality of barley.