scholarly journals Effect of Remediation Reagents on Bacterial Composition and Ecological Function in Black-Odorous Water Sediments

Author(s):  
Dong Xia ◽  
Hanbin Zhao ◽  
Sohei Kobayashi ◽  
Qi Mi ◽  
Aimin Hao ◽  
...  

Abstract Black-odorous urban water bodies and sediments pose a serious environmental problem. Herein, we conducted microcosm batch experiments to investigate the effect of remediation reagents (magnesium hydroxide and calcium nitrate) on native bacterial communities and their ecological functions in the black-odorous sediment of urban water. The dominant phyla (Proteobacteria, Actinobacteria, Chloroflexi, and Planctomycetes) and classes (Alpha-, Beta-, and Gamma-proteobacteria, Actinobacteria, Anaerolineae, and Planctomycetia) were determined under calcium nitrate and magnesium hydroxide treatments. Functional groups related to aerobic metabolism, including aerobic chemoheterotrophy, dark sulfide oxidation, and correlated dominant genera (Thiobacillus, Lysobacter, Gp16, and Gaiella) became more abundant under calcium nitrate treatment, whereas functional genes potentially involved in dissimilatory sulfate reduction became less abundant. The relative abundance of chloroplasts, fermentation, and correlated genera (Desulfomonile and unclassified Cyanobacteria) decreased under magnesium hydroxide treatment. These results indicated that calcium nitrate addition improved hypoxia-related reducing conditions in the sediment and promoted aerobic chemoheterotrophy.

1960 ◽  
Vol 11 (5) ◽  
pp. 742 ◽  
Author(s):  
D Martin ◽  
TL Lewis ◽  
J Cerny

When spray treatments were applied to half-trees of Cleopatra apples, it was shown that magnesium nitrate increased the incidence of pit and calcium nitrate decreased it. There was a suggestion that borax decreased the effectiveness of the calcium nitrate treatment. Magnesium or calcium nitrate, with or without borax, did not affect the potassium, magnesium, phosphorus, or nitrogen content of the fruit cortex. Calcium nitrate in 1959 increased the calcium content but magnesium nitrate had no effect. There was no significant difference in the content of potassium, magnesium, or phosphorus between 1958 and 1959, but the calcium content was 3.3 times as high in 1958. Pit incidence was low in 1958 and high in 1959. No significant difference in content of these four elements could be demonstrated between sound and pitted fruits. The results support the view that calcium is the critical element in pit incidence and that magnesium may play an important part.


2018 ◽  
Vol 55 (5) ◽  
pp. 463-474 ◽  
Author(s):  
Konstantin von Gunten ◽  
Tyler Warchola ◽  
Mark W. Donner ◽  
Manuel Cossio ◽  
Weiduo Hao ◽  
...  

Open pits, which remain after uranium (U) mining operations cease, can form meromictic lakes that develop suitable conditions for the containment of dissolved and colloidal metals. In this study, the distribution and speciation of U, nickel (Ni), and arsenic (As) in the water column of two meromictic pit lakes was investigated at the decommissioned Cluff Lake mine in northern Saskatchewan. The 28 m deep and older D pit had a chemocline at a 13 m depth, below which it turned anoxic and its meromixis was controlled by iron (Fe) cycling. Below the chemocline both Fe(III) and As(V) were reduced to Fe(II) and As(III), respectively. Iron cycling had a large effect on U distribution because reducing conditions prevented sulfide oxidation and a drop in pH in deeper layers. Metal-reducing bacteria were found to be present at, and below, the chemocline. In the deeper (90 m), larger and more recently flooded DJX pit, two chemoclines were observed at depths of 15 and 65 m. Both were linked to sharp U and Ni concentration gradients. Unlike the D pit, a transition to reducing conditions was not observed in the DJX pit’s water column. However, colloidal U, primarily associated with aluminum oxyhydroxides, was found below the first chemocline. Overall, the meromixis type determined the distribution and speciation of metals and bacteria in the investigated pit lakes, thus providing insights into the use of pit lakes as a potential bioremediation strategy.


2016 ◽  
Vol 24 (2) ◽  
Author(s):  
K. K. Holoborodko ◽  
O. M. Marenkov ◽  
V. A. Gorban ◽  
Y. S. Voronkova

This article proposes a completely new method of resolving the pressing global environmental problem of assessing the capacity of invasive organisms to adapt to new environmental conditions. A new three-step approach to the evaluation of vital and ecological functions of invasive species is recommended. In addition to classic species and population surveys, it was proposed to apply a stress-resistance biochemical assessment of invasive species. Stress resistance can be regarded as the main response of living organisms to changes in continuous environmental components. The obtained results will provide an opportunity to give a qualitative prognisis of what adaptive capacity an invasive species has,what precise ecological functions and for what time period it can perform in a new ecosystem.


2021 ◽  
Vol 12 ◽  
Author(s):  
Wensi Zhang ◽  
Yinzhao Wang ◽  
Li Liu ◽  
Yongxin Pan ◽  
Wei Lin

Magnetotactic bacteria (MTB) are a group of microbes that biomineralize membrane-bound, nanosized magnetite (Fe3O4), and/or greigite (Fe3S4) crystals in intracellular magnetic organelle magnetosomes. MTB belonging to the Nitrospirae phylum can form up to several hundreds of Fe3O4 magnetosome crystals and dozens of sulfur globules in a single cell. These MTB are widespread in aquatic environments and sometimes account for a significant proportion of microbial biomass near the oxycline, linking these lineages to the key steps of global iron and sulfur cycling. Despite their ecological and biogeochemical importance, our understanding of the diversity and ecophysiology of magnetotactic Nitrospirae is still very limited because this group of MTB remains unculturable. Here, we identify and characterize two previously unknown MTB populations within the Nitrospirae phylum through a combination of 16S rRNA gene-based and genome-resolved metagenomic analyses. These two MTB populations represent distinct morphotypes (rod-shaped and coccoid, designated as XYR, and XYC, respectively), and both form more than 100 bullet-shaped magnetosomal crystals per cell. High-quality draft genomes of XYR and XYC have been reconstructed, and they represent a novel species and a novel genus, respectively, according to their average amino-acid identity values with respect to available genomes. Accordingly, the names Candidatus Magnetobacterium cryptolimnobacter and Candidatus Magnetomicrobium cryptolimnococcus for XYR and XYC, respectively, were proposed. Further comparative genomic analyses of XYR, XYC, and previously reported magnetotactic Nitrospirae reveal the general metabolic potential of this MTB group in distinct microenvironments, including CO2 fixation, dissimilatory sulfate reduction, sulfide oxidation, nitrogen fixation, or denitrification processes. A remarkably conserved magnetosome gene cluster has been identified across Nitrospirae MTB genomes, indicating its putative important adaptive roles in these bacteria. Taken together, the present study provides novel insights into the phylogenomic diversity and ecophysiology of this intriguing, yet poorly understood MTB group.


BMC Genomics ◽  
2021 ◽  
Vol 22 (1) ◽  
Author(s):  
Xingyu Tao ◽  
Min Liu ◽  
Yazhou Yuan ◽  
Ruonan Liu ◽  
Kaijie Qi ◽  
...  

Abstract Background The content of stone cells in pears has a great influence on taste. Stone cells are formed by the accumulation of lignin. The treatment of exogenous calcium can affect the lignin synthesis, but this Ca-mediated mechanism is still unclear. In this study, the author performed a comparative transcriptomic analysis of callus of pears (Pyrus x bretschneideri) treated with calcium nitrate Ca (NO3)2 to investigate the role of calcium in lignin synthesis. Results There were 2889 differentially expressed genes (DEGs) detected between the Control and Ca (NO3)2 treatment in total. Among these 2889 DEGs, not only a large number of genes related to Ca single were found, but also many genes were enriched in secondary metabolic pathway, especially in lignin synthesis. Most of them were up-regulated during the development of callus after Ca (NO3)2 treatment. In order to further explore how calcium nitrate treatment affects lignin synthesis, the author screened genes associated with transduction of calcium signal in DEGs, and finally found CAM, CML, CDPK, CBL and CIPK. Then the author identified the PbCML3 in pears and conducted relevant experiments finding the overexpression of PbCML3 would increase the content of pear stone cells, providing potential insights into how Ca treatment enhances the stone cell in pears. Conclusions Our deep analysis reveals the effects of exogenous calcium on calcium signal and lignin biosynthesis pathway. The function of PbCML3 on stone cells formation was verified in pear.


Author(s):  
Pratibha L. Gai ◽  
M. A. Saltzberg ◽  
L.G. Hanna ◽  
S.C. Winchester

Silica based ceramics are some of the most fundamental in crystal chemistry. The cristobalite form of silica has two modifications, α (low temperature, tetragonal form) and β (high temperature, cubic form). This paper describes our structural studies of unusual chemically stabilized cristobalite (CSC) material, a room temperature silica-based ceramic containing small amounts of dopants, prepared by a wet chemical route. It displays many of the structural charatcteristics of the high temperature β-cristobalite (∼270°C), but does not undergo phase inversion to α-cristobalite upon cooling. The Structure of α-cristobalite is well established, but that of β is not yet fully understood.Compositions with varying Ca/Al ratio and substitutions in cristobalite were prepared in the series, CaO:Al2O3:SiO2 : 3-x: x : 40, with x= 0-3. For CSC, a clear sol was prepared from Du Pont colloidal silica, Ludox AS-40®, aluminium nitrate nonahydrate, and calcium nitrate hexahydrate in proportions to form a final composition 1:2:40 composition.


1998 ◽  
Vol 79 (01) ◽  
pp. 177-185 ◽  
Author(s):  
Ashia Siddiqua ◽  
Michael Wilkinson ◽  
Vijay Kakkar ◽  
Yatin Patel ◽  
Salman Rahman ◽  
...  

SummaryWe report the characterization of a monoclonal antibody (MAb) PM6/13 which recognises glycoprotein IIIa (GPIIIa) on platelet membranes and in functional studies inhibits platelet aggregation induced by all agonists examined. In platelet-rich plasma, inhibition of aggregation induced by ADP or low concentrations of collagen was accompanied by inhibition of 5-hydroxytryptamine secretion. EC50 values were 10 and 9 [H9262]g/ml antibody against ADP and collagen induced responses respectively. In washed platelets treated with the cyclooxygenase inhibitor, indomethacin, PM6/13 inhibited platelet aggregation induced by thrombin (0.2 U/ml), collagen (10 [H9262]g/ml) and U46619 (3 [H9262]M) with EC50 = 4, 8 and 4 [H9262]g/ml respectively, without affecting [14C]5-hydroxytryptamine secretion or [3H]arachidonate release in appropriately labelled cells. Studies in Fura 2-labelled platelets revealed that elevation of intracellular calcium by ADP, thrombin or U46619 was unaffected by PM6/13 suggesting that the epitope recognised by the antibody did not influence Ca2+ regulation. In agreement with the results from the platelet aggregation studies, PM6/13 was found to potently inhibit binding of 125I-fibrinogen to ADP activated platelets. Binding of this ligand was also inhibited by two other MAbs tested, namely SZ-21 (also to GPIIIa) and PM6/248 (to the GPIIb-IIIa complex). However when tested against binding of 125I-fibronectin to thrombin stimulated platelets, PM6/13 was ineffective in contrast with SZ-21 and PM6/248, that were both potent inhibitors. This suggested that the epitopes recognised by PM6/13 and SZ-21 on GPIIIa were distinct. Studies employing proteolytic dissection of 125I-labelled GPIIIa by trypsin followed by immunoprecipitation with PM6/13 and analysis by SDS-PAGE, revealed the presence of four fragments at 70, 55, 30 and 28 kDa. PM6/13 did not recognize any protein bands on Western blots performed under reducing conditions. However Western blotting analysis with PM6/13 under non-reducing conditions revealed strong detection of the parent GP IIIa molecule, of trypsin treated samples revealed recognition of an 80 kDa fragment at 1 min, faint recognition of a 60 kDa fragment at 60 min and no recognition of any product at 18 h treatment. Under similar conditions, SZ-21 recognized fragments at 80, 75 and 55 kDa with the 55kDa species persisting even after 18 h trypsin treatment. These studies confirm the epitopes recognised by PM6/13 and SZ-21 to be distinct and that PM6/13 represents a useful tool to differentiate the characteristics of fibrinogen and fibronectin binding to the GPIIb-IIIa complex on activated platelets.


TAPPI Journal ◽  
2013 ◽  
Vol 12 (6) ◽  
pp. 9-15 ◽  
Author(s):  
TOMI HIETANEN ◽  
JUHA TAMPER ◽  
KAJ BACKFOLK

The use of a new, technical, high-purity magnesium hydroxide-based peroxide bleaching additive was evaluated in full mill-scale trial runs on two target brightness levels. Trial runs were conducted at a Finnish paper mill using Norwegian spruce (Picea abies) as the raw material in a conventional pressurized groundwood process, which includes a high-consistency peroxide bleaching stage. On high brightness grades, the use of sodium-based additives cause high environmental load from the peroxide bleaching stage. One proposed solution to this is to replace all or part of the sodium hydroxide with a weaker alkali, such as magnesium hydroxide. The replacement of traditional bleaching additives was carried out stepwise, ranging from 0% to 100%. Sodium silicate was dosed in proportion to sodium hydroxide, but with a minimum dose of 0.5% by weight on dry pulp. The environmental effluent load from bleaching of both low and high brightness pulps was significantly reduced. We observed a 35% to 48% reduction in total organic carbon (TOC), 37% to 40% reduction in chemical oxygen demand (COD), and 34% to 60% reduction in biological oxygen demand (BOD7) in the bleaching effluent. At the same time, the target brightness was attained with all replacement ratios. No interference from transition metal ions in the process was observed. The paper quality and paper machine runnability remained good during the trial. These benefits, in addition to the possibility of increasing production capacity, encourage the implementation of the magnesium hydroxide-based bleaching concept.


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