scholarly journals Cotton CC-NBS-LRR Gene GbCNL130 Confers Resistance to Verticillium Wilt Across Different Species

2021 ◽  
Vol 12 ◽  
Author(s):  
Tinggang Li ◽  
Qianqian Zhang ◽  
Xilong Jiang ◽  
Ran Li ◽  
Nikhilesh Dhar
Keyword(s):  
Verticillium Wilt ◽  
Gene Clusters ◽  
Virus Induced Gene Silencing ◽  
Pr Genes ◽  
Yield And Quality ◽  
Resistant Varieties ◽  
Pathogenesis Related ◽  
In The Wild ◽  
Plant Genes ◽  
Research Findings

Verticillium wilt (VW) is a destructive disease in cotton caused by Verticillium dahliae and has a significant impact on yield and quality. In the absence of safe and effective chemical control, VW is difficult to manage. Thus, at present, developing resistant varieties is the most economical and effective method of controlling Verticillium wilt of cotton. The CC-NBS-LRR (CNL) gene family is an important class of plant genes involved in disease resistance. This study identified 141 GbCNLs in Gossypium barbadense genome, with 37.5% (53 genes) GbCNLs enriched in 12 gene clusters (GC01–GC12) based on gene distribution in the chromosomes. Especially, seven GbCNLs from two largest clusters (GC11 and GC12) were significantly upregulated in the resistant cultivar (Hai No. 7124) and the susceptible (Giza No. 57). Virus-induced gene silencing of GbCNL130 in G. barbadense, one typical gene in the gene cluster 12 (GC12), significantly altered the response to VW, compromising plant resistance to V. dahliae. In contrast, GbCNL130 overexpression significantly increased the resistance to VW in the wild-type Arabidopsis thaliana. Based on our research findings presented here, we conclude that GbCNL130 promotes resistance to VW by activating the salicylic acid (SA)-dependent defense response pathway resulting in strong accumulation of reactive oxygen species and upregulation of pathogenesis-related (PR) genes. In conclusion, our study resulted in the discovery of a new CNL resistance gene in cotton, GbCNL130, that confers resistance to VW across different hosts.

scholarly journals PlWRKY13: A Transcription Factor Involved in Abiotic and Biotic Stress Responses in Paeonia lactiflora

2019 ◽  
Vol 20 (23) ◽  
pp. 5953
Author(s):  
Xue Wang ◽  
Junjie Li ◽  
Xianfeng Guo ◽  
Yan Ma ◽  
Qian Qiao ◽  
...  
Keyword(s):  
Fungal Infection ◽  
Stress Responses ◽  
Plant Stress ◽  
Active Role ◽  
Virus Induced Gene Silencing ◽  
Paeonia Lactiflora ◽  
Pr Genes ◽  
Resistance Pathway ◽  
Pathogenesis Related ◽  
Increased Sensitivity

Many members of the WRKY family regulate plant growth and development. Recent studies have shown that members of the WRKY family, specifically WRKY13, play various roles in the regulation of plant stress resistance. To study the function of WRKY family members in peony, the PlWRKY13 gene (KY271095) was cloned from peony leaves. Sequence analysis and subcellular localization results revealed that PlWRKY13 has no introns, belongs to the type IIc subgroup of the WRKY family, and functions in the nucleus. The expression pattern of PlWRKY13 was analysed via real-time quantitative RT-PCR (qRT-PCR), which showed that the expression of PlWRKY13 was induced by four types of abiotic stress, low-temperature, high-temperature, waterlogging and salt stress, and was positively upregulated in response to these stresses. In addition, the expression of PlWRKY13 tended to first decrease and then increase after infection with Alternaria tenuissima. Virus-induced gene silencing (VIGS) technology was used to explore the function of PlWRKY13 in the resistance of Paeonia lactiflora to fungal infection further, and the results showed that PlWRKY13-silenced plants displayed increased sensitivity to A. tenuissima. The infection was more severe and the disease index (DI) significantly greater in the PlWRKY13-silenced plants than in the control plants, and the expression of pathogenesis-related (PR) genes was also significantly altered in the PlWRKY13-silenced plants compared with the control plants. The contents of the endogenous hormones jasmonic acid (JA) and salicylic acid (SA) were measured, and the results showed that the JA content increased gradually after infection with A. tenuissima and that JA may play an active role in the resistance of P. lactiflora to pathogen infection, while the SA content decreased after PlWRKY13 silencing. The contents of the two hormones decreased overall, suggesting that they are related to the transcription of PlWRKY13 and that PlWRKY13 may be involved in the disease-resistance pathway mediated by JA and SA. In summary, the results of our study showed that PlWRKY13 expression was induced by stress and had a positive effect on the resistance of P. lactiflora to fungal infection.

Molecular characterisation and functional analysis of a cytochrome P450 gene in cotton

Biologia ◽  
2017 ◽  
Vol 72 (1) ◽  
Author(s):  
Kexue Zhou ◽  
Lu Long ◽  
Quan Sun ◽  
Weina Wang ◽  
Wei Gao ◽  
...  
Keyword(s):  
Functional Analysis ◽  
Cytochrome P450 ◽  
Verticillium Wilt ◽  
Open Reading Frame ◽  
Molecular Characterisation ◽  
Virus Induced Gene Silencing ◽  
Cytochrome P450 Gene ◽  
Reading Frame ◽  
P450 Gene ◽  
Yield And Quality

AbstractVerticillium wilt causes devastating loss of yield and quality in many crops, including cotton. To determine the molecular mechanism of resistance to verticillium wilt in cotton, we isolated a new cytochrome P450 gene, CYP94C1, and analysed its function. We obtained the complete open reading frame, which encodes a protein of 500 amino acids. The results of the functional analysis showed that resistance to verticillium wilt was enhanced when the gene was silenced using the virus-induced gene silencing (VIGS) method in cotton.

scholarly journals The Capsicum baccatum-Specific Truncated NLR Protein CbCN Enhances the Innate Immunity against Colletotrichum acutatum

2021 ◽  
Vol 22 (14) ◽  
pp. 7672
Author(s):  
Seungmin Son ◽  
Soohong Kim ◽  
Kyong Sil Lee ◽  
Jun Oh ◽  
Inchan Choi ◽  
...  
Keyword(s):  
Innate Immunity ◽  
Susceptible Variety ◽  
Chili Pepper ◽  
Colletotrichum Acutatum ◽  
Specific Gene ◽  
Virus Induced Gene Silencing ◽  
Pr Genes ◽  
Capsicum Baccatum ◽  
Pathogenesis Related ◽  
Chili Peppers

Chili pepper (Capsicum annuum) is an important fruit and spice used globally, but its yield is seriously threatened by anthracnose. Capsicum baccatum (C. baccatum) is particularly valuable as it carries advantageous disease resistance genes. However, most of the genes remain to be identified. In this study, we identified the C. baccatum-specific gene CbCN, which encodes a truncated nucleotide-binding and leucine-rich repeat protein in the anthracnose resistant chili pepper variety PBC80. The transcription of CbCN was greater in PBC80 than it was in the susceptible variety An-S after Colletotrichum acutatum inoculation. In order to investigate the biological function of CbCN, we generated transgenic tobacco lines constitutively expressing CbCN. Notably, CbCN-overexpressing transgenic plants exhibited enhanced resistance to C. acutatum compared to wild-type plants. Moreover, the expression of pathogenesis-related (PR) genes was remarkably increased in a CbCN-overexpressing tobacco plants. In order to confirm these results in chili pepper, we silenced the CbCN gene using the virus-induced gene silencing system. The anthracnose resistance and expressions of PR1, PR2, and NPR1 were significantly reduced in CbCN-silenced chili peppers after C. acutatum inoculations. These results indicate that CbCN enhances the innate immunity against anthracnose caused by C. acutatum by regulating defense response genes.

scholarly journals Blocks in the pseudouridimycin pathway unlock hidden metabolites in the Streptomyces producer strain

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Marianna Iorio ◽  
Sahar Davatgarbenam ◽  
Stefania Serina ◽  
Paolo Criscenzo ◽  
Mitja M. Zdouc ◽  
...  
Keyword(s):  
Gene Clusters ◽  
Biosynthetic Gene Cluster ◽  
Systematic Investigation ◽  
Biosynthetic Gene ◽  
Wild Type ◽  
Bacterial Rna ◽  
Soil Isolate ◽  
Mutant Strains ◽  
In The Wild ◽  
Polymerase Inhibitor

AbstractWe report a metabolomic analysis of Streptomyces sp. ID38640, a soil isolate that produces the bacterial RNA polymerase inhibitor pseudouridimycin. The analysis was performed on the wild type, on three newly constructed and seven previously reported mutant strains disabled in different genes required for pseudouridimycin biosynthesis. The results indicate that Streptomyces sp. ID38640 is able to produce, in addition to lydicamycins and deferroxiamines, as previously reported, also the lassopeptide ulleungdin, the non-ribosomal peptide antipain and the osmoprotectant ectoine. The corresponding biosynthetic gene clusters were readily identified in the strain genome. We also detected the known compound pyridindolol, for which we propose a previously unreported biosynthetic gene cluster, as well as three families of unknown metabolites. Remarkably, the levels of most metabolites varied strongly in the different mutant strains, an observation that enabled detection of metabolites unnoticed in the wild type. Systematic investigation of the accumulated metabolites in the ten different pum mutants identified shed further light on pseudouridimycin biosynthesis. We also show that several Streptomyces strains, able to produce pseudouridimycin, have distinct genetic relationship and metabolic profile with ID38640.

scholarly journals Simultaneous silencing of two different Arabidopsis genes with a novel virus-induced gene silencing vector

Plant Methods ◽  
2021 ◽  
Vol 17 (1) ◽  
Author(s):  
Kunxin Wu ◽  
Yadan Wu ◽  
Chunwei Zhang ◽  
Yan Fu ◽  
Zhixin Liu ◽  
...  
Keyword(s):  
Gene Silencing ◽  
Double Mutant ◽  
Target Genes ◽  
Rna Binding ◽  
Protein Product ◽  
Antiviral Defense ◽  
Virus Induced Gene Silencing ◽  
Argonaute 2 ◽  
Plant Genes ◽  
Silencing Pathways

Abstract Background Virus-induced gene silencing (VIGS) is a useful tool for functional characterizations of plant genes. However, the penetrance of VIGS varies depending on the genes to be silenced, and has to be evaluated by examining the transcript levels of target genes. Results In this report, we report the development of a novel VIGS vector that permits a preliminary assessment of the silencing penetrance. This new vector is based on an attenuated variant of Turnip crinkle virus (TCV) known as CPB that can be readily used in Arabidopsis thaliana to interrogate genes of this model plant. A CPB derivative, designated CPB1B, was produced by inserting a 46 nucleotide section of the Arabidopsis PHYTOENE DESATURASE (PDS) gene into CPB, in antisense orientation. CPB1B induced robust PDS silencing, causing easily visible photobleaching in systemically infected Arabidopsis leaves. More importantly, CPB1B can accommodate additional inserts, derived from other Arabidopsis genes, causing the silencing of two or more genes simultaneously. With photobleaching as a visual marker, we adopted the CPB1B vector to validate the involvement of DICER-LIKE 4 (DCL4) in antiviral defense against TCV. We further revealed the involvement of ARGONAUTE 2 (AGO2) in PDS silencing and antiviral defense against TCV in dcl2drb4 double mutant plants. These results demonstrated that DOUBLE-STRANDED RNA-BINDING PROTEIN 4 (DRB4), whose protein product (DRB4) commonly partners with DCL4 in the antiviral silencing pathway, was dispensable for PDS silencing induced by CPB1B derivative in dcl2drb4 double mutant plants. Conclusions The CPB1B-based vector developed in this work is a valuable tool with visualizable indicator of the silencing penetrance for interrogating Arabidopsis genes, especially those involved in the RNA silencing pathways.

scholarly journals Производство и фитосанитарная оценка семенных клубней картофеля в лесостепи Приобья Алтайского края

2019 ◽  
Author(s):  
N.V. Chevychelova ◽  
E.I. Sedykh ◽  
S.V. Zharkova ◽  
V.I. Leunov
Keyword(s):  
Seed Potato ◽  
Potato Production ◽  
Seed Potato Production ◽  
Planting Time ◽  
Potato Varieties ◽  
Altai Region ◽  
Disease Resistant ◽  
Resistant Varieties ◽  
Research Findings ◽  
Production Indices

Представлены результаты исследований производства семенного картофеля в условиях Алтайского края. Дана оценка отечественных сортов картофеля репродукции элита по производственным показателям и по фитосанитарному состоянию клубней к моменту их посадки. По каждому заболеванию, зафиксированному в Алтайском крае, выделены наиболее устойчивые сорта.The research findings on seed potato production in the Altai Region are discussed. The domestic potato varieties of elite reproduction are evaluated according to their production indices and phytosanitary condition of tubers at planting time. The most disease resistant varieties have been identified for each disease recorded in the Altai Region.

Platypus

2007 ◽  
Author(s):  
Tom Grant ◽  
Illustrations by Dominic Fanning
Keyword(s):  
Charles Darwin ◽  
Reference List ◽  
Factual Information ◽  
General Reader ◽  
In The Wild ◽  
History Of ◽  
Research Findings ◽  
The Subject ◽  
British Colonies ◽  
Comprehensive Reference

Since it first became known to European scientists and naturalists in 1798, the platypus has been the subject of controversy, interest and absolute wonder. Found only in Australia, the platypus is a mammal that lays eggs but, like other mammals, it has fur and suckles its young on milk. Many early biologists who visited the British colonies in Australia, including Charles Darwin, went out of their way to observe this remarkable animal. In Australia today the species is considered to be an icon, but one that many Australians have never seen in the wild. This book presents established factual information about the platypus and examines the most recent research findings, along with some of the colourful history of the investigation of its biology. This completely updated edition covers its anatomy, distribution and abundance, breeding, production of venom, unique senses, ecology, ancestry and conservation. It includes a 'Frequently Asked Questions' section for the general reader and, for those wishing to find out more detailed information, a comprehensive reference list.

scholarly journals Isolate specific responses of the non-host grass Brachypodium distachyon to the fungal pathogen Zymoseptoria tritici, compared to wheat.

2020 ◽  
Author(s):  
Ailsing Reilly ◽  
Sujit Jung Karki ◽  
Anthony Twamley ◽  
Anna M.M Tiley ◽  
Steven Kildea ◽  
...  
Keyword(s):  
Fungal Pathogen ◽  
Plant Immunity ◽  
Brachypodium Distachyon ◽  
Septoria Tritici Blotch ◽  
Septoria Tritici ◽  
Pr Genes ◽  
Zymoseptoria Tritici ◽  
Expression Of Genes ◽  
Pathogenesis Related ◽  
Defence Gene Expression

Septoria tritici blotch (STB) is an important foliar disease of wheat that is caused by the fungal pathogen Zymoseptoria tritici. The grass Brachypodium distachyon has been used previously as a model system for cereal-pathogen interactions. In this study, we examined the non-host resistance (NHR) response of B. distachyon to two different Z. tritici isolates in comparison to wheat. These isolates vary in aggressiveness on wheat cv. Remus displaying significant differences in disease and pycnidia coverage. Using microscopy, we found that similar isolate specific responses were observed for H2O2 accumulation and cell death in both wheat and B. distachyon. Despite this, induction of isolate specific patterns of defence gene expression by Z. tritici did differ between B. distachyon and wheat. Our results suggest that phenylalanine ammonia lyase (PAL) expression may be important for NHR in B. distachyon while pathogenesis-related (PR) genes and expression of genes regulating reactive oxygen species (ROS) may be important to limit disease in wheat. Future studies of the B. distachyon-Z. tritici interaction may allow identification of conserved plant immunity targets which are responsible for the isolate specific responses observed in both plant species.

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