scholarly journals Development of an InDel marker set to establish hybridization between wild boar and domestic pig (Sus scrofa) breeds

2019 ◽  
pp. 21-25
Author(s):  
Bendegúz Mihalik ◽  
Krisztián Frank ◽  
Dániel Szemethy ◽  
Viktor Stéger ◽  
Szilvia Kusza
Keyword(s):  
Wild Boar ◽  
Sus Scrofa ◽  
False Negative ◽  
Lower Grade ◽  
Domestic Pig ◽  
Large White ◽  
Variant Call ◽  
Wild Boars ◽  
Pig Breeds ◽  
Cost Efficient

Wild boar and domestic pig breeds belong to the same species (Sus scrofa), so they can easily have viable offspring. This could be a problem in preserving the genetic lines of wild boars, keeping clean the food industry from lower-grade hybrid boar meat, and „producing” ethically questionable trophies, too. The aim of our study was to develop a cost-efficient, fast, easy and accurate marker set which can separate the wild boars from hybrids and domestic pig breeds. The InDel markers were developed using 59 full pig genomes of 17 different breeds (e.g. Duroc, Large White, Landrace, Mangalica, wild boar). Sequence differences between the genomes of wild boars and domestic breeds were identified in variant call files, and verified using the IGV software. Wild boar, mangalica and duroc specific primers to amplify the chosen InDel regions were designed using Primer3. After preliminary tests five markers were chosen, three wild boar specific, one Mangalica specific and one Duroc specific one. Fluorescently labelled primers were used to make the valuation easier and more accurate with capillary electrophoresis instead of gel-electrophoresis. The markers were optimised individually and in multiplex conditions and tested in samples of 11 breeds. In conclusion, a new, faster and cheaper set was developed to separate the wild boars from the hybrids and domestic breeds. Based on the preliminary testing on wild boars, duroc and mangalica breeds zero samples resulted false negative, so it is 100% accurate. In addition, it is a much more cost- and time-effective way than testing every single sample with STR sets.

scholarly journals Genetic diversity of wild boar populations and domestic pig breeds (Sus scrofa) in South-western Europe

2010 ◽  
Vol 101 (4) ◽  
pp. 797-822 ◽  
Author(s):  
PAULO CÉLIO ALVES ◽  
IRIS PINHEIRO ◽  
RAQUEL GODINHO ◽  
JOAQUIN VICENTE ◽  
CHRISTIAN GORTÁZAR ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Wild Boar ◽  
Sus Scrofa ◽  
Western Europe ◽  
Domestic Pig ◽  
Pig Breeds

scholarly journals The Origin of the Domestic Pig: Independent Domestication and Subsequent Introgression

Genetics ◽  
2000 ◽  
Vol 154 (4) ◽  
pp. 1785-1791 ◽  
Author(s):  
E Giuffra ◽  
J M H Kijas ◽  
V Amarger ◽  
Ö Carlborg ◽  
J-T Jeon ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Mitochondrial Dna ◽  
Wild Boar ◽  
Sus Scrofa ◽  
Hybrid Origin ◽  
Molecular Evidence ◽  
Historical Records ◽  
Domestic Pig ◽  
Pig Breeds ◽  
Livestock Species

Abstract The domestic pig originates from the Eurasian wild boar (Sus scrofa). We have sequenced mitochondrial DNA and nuclear genes from wild and domestic pigs from Asia and Europe. Clear evidence was obtained for domestication to have occurred independently from wild boar subspecies in Europe and Asia. The time since divergence of the ancestral forms was estimated at ~500,000 years, well before domestication ~9,000 years ago. Historical records indicate that Asian pigs were introduced into Europe during the 18th and early 19th centuries. We found molecular evidence for this introgression and the data indicated a hybrid origin of some major “European” pig breeds. The study is an advance in pig genetics and has important implications for the maintenance and utilization of genetic diversity in this livestock species.

The effect of carcass weight on chemical characteristics and fatty acid composition of Longissimus dorsi and Semimembranosus muscles of European wild boar (Sus scrofa scrofa) meat

2018 ◽  
Vol 98 (3) ◽  
pp. 557-564
Author(s):  
Martyna Batorska ◽  
Justyna Więcek ◽  
Małgorzata Kunowska-Slósarz ◽  
Kamila Puppel ◽  
Jan Slósarz ◽  
...  
Keyword(s):  
Fatty Acids ◽  
Fatty Acid Composition ◽  
Fatty Acid ◽  
Wild Boar ◽  
Sus Scrofa ◽  
Carcass Weight ◽  
Longissimus Dorsi ◽  
Chemical Characteristics ◽  
Wild Boars ◽  
European Wild Boar

The objective of this study was to investigate the effect of carcass weight on chemical characteristics and fatty acid composition of m. longissimus dorsi and m. semimembranosus of European wild boar (Sus scrofa scrofa) meat. The research was carried out on 50 wild boars shot during four battues at hunting reserves in the central part of Poland. The carcasses were divided into three groups: ≤30 kg (G1), 31–45 kg (G2), and >45 kg (G3). The protein concentration increased with carcass weight (P ≤ 0.01). The concentration of saturated fatty acids was influenced by carcass weight and was higher when weight increased. A significantly higher level of monounsaturated fatty acids (MUFA) was found in the carcasses of wild boars from G3 compared with G1 group (P ≤ 0.01). The content of C18:2n-6 was significantly lower in the lightest carcasses compared with the heaviest (P ≤ 0.05). Statistical analysis confirmed that carcasses weight significantly affected polyunsaturated fatty acids (PUFA) n-3 content. The lightest carcasses contained a significantly higher concentration of PUFA n-3 (P ≤ 0.01). In addition, in G3, the amount of C22:5n-3 was two-fold lower (P ≤ 0.01) than in G1. The research has shown that the meat quality was affected by the carcass weight, resulting better parameters in the lighter than in the heavier carcasses. Therefore, most of the culled wild boars should be squeakers and young boars after the first year of life.

scholarly journals Comparative analysis of gene expression profiles in differentiated subcutaneous adipocytes between Jiaxing Black and Large White Pigs

2020 ◽  
Author(s):  
Dawei Zhang ◽  
Wenjing Wu ◽  
Xin Huang ◽  
Ke Xu ◽  
Cheng Zheng ◽  
...  
Keyword(s):  
Signaling Pathway ◽  
Expression Profiles ◽  
Mapk Signaling ◽  
Fat Deposition ◽  
Mapk Signaling Pathway ◽  
Differentially Expressed ◽  
Rna Seq ◽  
Domestic Pig ◽  
Large White ◽  
Pig Breeds

Abstract Background: Chinese domestic pig breeds are reputed for pork quality, but their low ratio of lean-to-fat carcass weight decreases production efficiency. A better understanding of the genetic regulation network of SC fat tissue is necessary for the rational selection of Chinese domestic pig breeds. In the present study, SC adipocytes were isolated from Jiaxing Black pigs (a Chinese indigenous pig breed with redundant SC fat deposition) and Large White pigs (a lean-type pig breed with relatively low SC fat deposition) and the expression profiles of mRNAs and lncRNAs were compared by RNA-seq analysis to identify biomarkers correlated with the differences of SC fat deposition between the two breeds.Results: A total of 3,371 differentially expressed genes (DEGs) and 1,182 differentially expressed lncRNAs (DELs) were identified in SC adipocytes between Jiaxing Black (JX) and Large White (LW) pigs, which included 797 upregulated mRNAs, 2,574 downregulated mRNAs, 461 upregulated lncRNAs and 721 downregulated lncRNAs. Gene Ontology and KEGG pathway analyses revealed that the DEGs and DELs were mainly involved in the immune response, cell fate determination, PI3K-Akt signaling pathway and MAPK signaling pathway, which are known to be related to adipogenesis and lipid metabolism. The expression levels of DEGs and DELs according to the RNA-seq data were verified by quantitative PCR, which showed 81.8% consistency. The differences in MAPK pathway activity between JX and LW pigs was confirmed by western blot analysis, with <100-fold elevated p38 phosphorylation in JX pigs.Conclusions: This study offers a detailed characterization of mRNAs and lncRNAs in fat- and lean-type pig breeds. The activity of the MAPK signaling pathway was found to be associated with subcutaneous adipogenesis. These results greatly enhance our understanding of the molecular mechanisms regulating SC fat deposition in pigs.

scholarly journals Genome Sequences of Three African Swine Fever Viruses of Genotypes IV and XX from Zaire and South Africa, Isolated from a Domestic Pig (Sus scrofa domesticus), a Warthog (Phacochoerus africanus), and a European Wild Boar (Sus scrofa)

2020 ◽  
Vol 9 (32) ◽  
Author(s):  
S. Ndlovu ◽  
A.-L. Williamson ◽  
L. Heath ◽  
O. Carulei
Keyword(s):  
South Africa ◽  
Wild Boar ◽  
Sus Scrofa ◽  
African Swine Fever Virus ◽  
African Swine Fever ◽  
Genome Sequences ◽  
Domestic Pig ◽  
European Wild Boar ◽  
Sus Scrofa Domesticus ◽  
Phacochoerus Africanus

ABSTRACT We report here the genome sequences of three African swine fever virus isolates obtained from a domestic pig (Zaire [Zaire]), a warthog (RSA/W1/1999 [South Africa]), and a European wild boar (RSA/2/2004 [South Africa]) belonging to genotypes IV, XX, and XX, respectively. This report increases the number of genotype XX, wild boar, and warthog reference sequences available.

scholarly journals Very highly prevalent Macracanthorhynchus hirudinaceus infection of wild boar Sus scrofa in Khuzestan province, south-western Iran

2006 ◽  
Vol 43 (2) ◽  
pp. 86-91 ◽  
Author(s):  
G. Mowlavi ◽  
J. Massoud ◽  
I. Mobedi ◽  
S. Solaymani-Mohammadi ◽  
M. Gharagozlou ◽  
...  
Keyword(s):  
Wild Boar ◽  
Sus Scrofa ◽  
Cane Sugar ◽  
Human Infection ◽  
Wild Boars ◽  
Khuzestan Province ◽  
Total Prevalence ◽  
High Prevalence ◽  
Risk Situation ◽  
Macracanthorhynchus Hirudinaceus

AbstractAn epidemiological and pathological study of Macracanthorhynchus hirudinaceus infection in a total of 50 wild boars Sus scrofa attila from cane sugar fields of Iranian Khuzestan was performed. The total prevalence of 64.0 % detected is the highest hitherto known by this acanthocephalan species in wild boars and may reflect a very high contamination of the farm lands studied as the consequence of the crowding of the wild boar population in cane sugar fields. Observations prove that this species is a wild boar gut wall perforating acanthocephalan. High burdens may become so pathogenic for the host individual as to be responsible for its elimination from the population. Thus, this acanthocephalan may play a role in the control of the S. scrofa population inhabiting cane sugar fields, only lowly infected boars being able to survive. In this way, M. hirudinaceus may be useful, as the wild boar is a serious pest of field corps and, moreover, causes a variety of damage to cane sugar fields because of using them for shelter and nesting areas. Such high prevalence in wild boars and presumably high contamination of cane sugar fields represent a human infection risk for farmers, as well as for concrete ethnic group minorities in Iran. The numerous M. hirudinaceus human infection cases reported so far, mainly in Asian countries, support such a risk situation.

scholarly journals Aujeszky’s Disease in South-Italian Wild Boars (Sus Scrofa): A Serological Survey

Animals ◽  
2021 ◽  
Vol 11 (11) ◽  
pp. 3298
Author(s):  
Gianmarco Ferrara ◽  
Consiglia Longobardi ◽  
Filomena D’Ambrosi ◽  
Maria Grazia Amoroso ◽  
Nicola D’Alessio ◽  
...  
Keyword(s):  
Wild Boar ◽  
Sus Scrofa ◽  
Pseudorabies Virus ◽  
Viral Disease ◽  
Serum Samples ◽  
Hunting Season ◽  
Campania Region ◽  
Wild Boars ◽  
Aujeszky's Disease ◽  
Aujeszky’S Disease

Aujeszky’s disease (AD, pseudorabies) is a viral disease of suids caused by Suid Herpesvirus 1 (SHV-1) also referred as Aujeszky’s disease virus (ADV) or Pseudorabies virus (ADV). Domestic pig and Wild boar (Sus scrofa) are the natural host, but many species can be infected with ADV. The aim of our study was to evaluate seroprevalence of AD in wild boar hunted in the Campania Region, during the 2016–2017 hunting season. A total of 503 serum samples from wild boars hunted in the provinces of Campania Region (Southern Italy) were collected and were tested for antibody against ADV using an AD, blocking ELISA assay. A Seroprevalence of 23.85% (120/503, 95% Confidence Interval (CI): 20.15–27.55) was found. Gender was not significantly associated with of ADV seropositivity (p > 0.05), while the presence of ADV antibodies was statistically associated with age (>36-month, p < 0.0001) and location (Avellino, p = 0.0161). Our prevalence values are like those obtained in 2010 in our laboratory (30.7%), demonstrating a constant circulation of ADV in the area.

scholarly journals Adaptation of wild boar (Sus scrofa) activity in a human-dominated landscape

BMC Ecology ◽  
2020 ◽  
Vol 20 (1) ◽  
Author(s):  
Franz Johann ◽  
Markus Handschuh ◽  
Peter Linderoth ◽  
Carsten F. Dormann ◽  
Janosch Arnold
Keyword(s):  
Wild Boar ◽  
Sus Scrofa ◽  
Activity Patterns ◽  
Time Of Day ◽  
Additive Models ◽  
Anthropogenic Factors ◽  
Small Scale ◽  
Home Ranges ◽  
Wild Boars ◽  
Hunting Pressure

Abstract Background Wild boars (Sus scrofa L.) are globally widely distributed, and their populations have increased in Europe during recent decades. Encounters between humans and wild boars are rare because of the predominantly nocturnal lifestyle of the latter, and wild boar management by hunting is a challenging task. Animal activity patterns are important for understanding the behaviour of a species. However, knowledge of detailed temporal patterns and an understanding of the drivers of wild boar activity at a fine temporal scale are lacking. Of special relevance for human–wild boar interactions (e.g., encounters, conflicts, and management) is the question of whether nocturnal activity depends on anthropogenic factors and, particularly, how local hunting regimes may affect activity patterns. We used GPS telemetry and acceleration measurements to shed light on this part of wild boar behaviour, observing 34 animals in Central Europe. Animals were tracked along a gradient of hunting pressure from hunting-free areas to areas with low or high hunting pressure. Fitted generalised additive models allowed predicting the probability of active behaviour under differing disturbance regimes precisely to day of year and time of day. Results The wild boars were predominantly nocturnal, with peak activity at approximately midnight. However, the data showed increased activity during daylight for wild boars that used no-hunting zones or reduced-hunting zones. Large areas with low disturbance levels promoted activity during daylight more than smaller areas with an intermediate disturbance regime. High air temperatures and locations within forests reduced the probability of active behaviour, whereas proximity to tracks used for forestry or agriculture was accompanied by a higher probability of activity. Conclusions We conclude that wild boars flexibly adjust their activity to their local environmental conditions, considering disturbances at the scale of long-term home ranges as well as actual small-scale landscape quality. Entire wild boar home ranges should be covered in the delineation of reserves intending to stimulate activity during daylight.

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