scholarly journals New and poorly known “araphid” diatom species (Bacillariophyta) from regions near Lake Titicaca, South America and a discussion on the continued use of morphological characters in “araphid” diatom taxonomy

PhytoKeys ◽  
2021 ◽  
Vol 187 ◽  
pp. 23-70
Author(s):  
Eduardo A. Morales ◽  
Carlos E. Wetzel ◽  
Luc Ector
Keyword(s):  
Morphological Characters ◽  
Ecological Change ◽  
Lake Titicaca ◽  
Molecular Approaches ◽  
The Andes ◽  
Apical Pore ◽  
Andean Altiplano ◽  
Continued Use ◽  
Species Distinction ◽  
Diatom Taxonomy

Based on two Andean Altiplano samples and on light and scanning electron microscopy analyses, we present six new species of “araphid” diatoms in the genus Pseudostaurosira, P. aedessp. nov., P. frankenaesp. nov., P. heteropolarissp. nov., P. oblongasp. nov., P. occultasp. nov., and P. pulchrasp. nov. Additional data are provided for four other known taxa, Nanofrustulum cataractarum, N. rarissimum, P. sajamaensis and P. vulpina, the latter species corresponding to a stat. nov. based on a variety of P. laucensis. Each taxon is described morphologically and compared with closely related published taxa, using characters such as axial area, virgae, vimines, areolar shape, volae, internal striae depositions, spines, flaps and apical pore fields, which are not usually used for species distinction within the genus. It is our intention that the detailed morphological descriptions of each taxon and the elaborate comparative tables we provide serve as a basis for correction of neo and paleo-databases for the Altiplano to produce a better account of autecological data and ecological change in the region. Some arguments for our continued use of a morphologically based approach are given in the context of rapid environmental degradation in the Andes and the difficulties in applying molecular approaches in countries such as Bolivia.

Entomophilic nematodes, Diploscapter coronatus and Oscheius tipulae from Afghanistan

Zootaxa ◽  
2021 ◽  
Vol 4926 (3) ◽  
pp. 401-416
Author(s):  
MOHAMMAD HUSSAIN FALAHZADAH ◽  
EBRAHIM SHOKOOHI ◽  
GHOLAM HOSSEIN MORAVEJ ◽  
PHATU WILLIAM MASHELA ◽  
ABDUL KHALID MADADI ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Genetic Distance ◽  
Galleria Mellonella ◽  
Morphological Characters ◽  
Molecular Data ◽  
Soil Samples ◽  
The Body ◽  
Morphometric Data ◽  
Molecular Approaches ◽  
The Relationship

Several soil samples from different habitats in Badakhshan province of Afghanistan were collected to isolate and characterize bacteria feeding nematodes. The Galleria mellonella-baiting method was used for the isolation of the Afghan insect-associated nematodes. The nematodes were studied using morphological and morphometric data. The Oscheius specimen was characterized by a longer body (630–820 µm) and shorter pharynx (125–145 µm), whereas other morphological characters were not unusual. The Diploscapter specimen had an annulated cuticle, with lip region width 1.5 times shorter than the stoma, and had separated pharyngeal corpus from the isthmus and vulva located in the middle of the body. The molecular data were derived using three loci; 18S, 28S (D2/D3 segment), and ITS rRNA region, which were utilized to measure the genetic distance. The phylogenetic analysis was conducted to reconstruct the relationship tree. Both morphological and molecular approaches confirmed the identity of nematode isolates as Oscheius tipulae and Diploscapter coronatus. This is the first report of insect-associated nematodes from the soil of Afghanistan. Both species were capable of infecting and killing G. mellonella larvae in less than 96 h. 

Taxonomy and phylogeny of calcareous sponges (Porifera: Calcarea: Calcinea) from Brazilian mid-shelf and oceanic islands

Zootaxa ◽  
2017 ◽  
Vol 4311 (3) ◽  
pp. 301 ◽  
Author(s):  
FERNANDA AZEVEDO ◽  
ANDRÉ PADUA ◽  
FERNANDO MORAES ◽  
ANDRÉ ROSSI ◽  
GUILHERME MURICY ◽  
...  
Keyword(s):  
Species Richness ◽  
Morphological Characters ◽  
Oceanic Islands ◽  
Biological Communities ◽  
Calcareous Sponges ◽  
Molecular Approaches ◽  
Strategic Value ◽  
Molecular Tree ◽  
Trindade Island ◽  
Fernando De Noronha

Despite the enormous economic, scientific and strategic value of the Brazilian oceanic and mid-shelf islands (BOMIs), the biological communities of these islands are still poorly known. An example is their fauna of calcareous sponges (Porifera: Calcarea), with only six species described up to date. In the present study, we analysed the Calcinean sponges from the mid-shelf Abrolhos Archipelago and four of the five Brazilian oceanic islands (São Pedro e São Paulo Archipelago, Fernando de Noronha Archipelago, Rocas Atoll, and Trindade Island), using both morphological and molecular approaches for taxonomy. Fourteen species were found, of which 12 are new to science: Arturia trindadensis sp. nov., Borojevia tenuispinata sp. nov., B. trispinata sp. nov., Clathrina insularis sp. nov., C. lutea sp. nov., C. mutabilis sp. nov., C. zelinhae sp. nov., Ernstia citrea sp. nov., E. multispiculata sp. nov., E. rocasensis sp. nov., E. sanctipauli sp. nov., and E. solaris sp. nov. These results raised in 63% the species richness of calcareous sponges from the BOMIs. Clathrina aurea and Leucetta floridana were recollected and the former had its geographical distribution expanded. The molecular tree obtained confirmed the morphological identifications and allowed a discussion about the evolution of morphological characters, and the usefulness of some of those characters in the taxonomy of Calcinea. 

scholarly journals Identification of the Pathogen Causing Stem Blight Disease on Chili in Sindangjaya Village, Cipanas, Cianjur, West Java Based on Morphological and Molecular Analyses

2021 ◽  
Vol 17 (1) ◽  
pp. 35
Author(s):  
Wartono Wartono
Keyword(s):  
Molecular Identification ◽  
Phytophthora Capsici ◽  
Economic Value ◽  
Morphological Characters ◽  
Stem Rot ◽  
West Java ◽  
Molecular Analyses ◽  
Molecular Approaches ◽  
Rot Disease ◽  
Blight Disease

<p>Chili (Capsicum annuum L.) is a vegetable commodity with high economic value which is widely cultivated by farmers in Indonesia. One of the obstacles faced in chili cultivation is stem rot disease. This study aimed to identify the pathogens that caused stem rot in chili plants obtained from one location in Sindangjaya Village, Cipanas District, Cianjur Regency, West Java Province based on morphological and molecular analyses. Pathogen identification was performed with morphological and molecular approaches. The morphological characters observed included colony shape, sporangium diameter, and mating type. The pathogenicity of the isolates was assayed by inoculating chili stems aged 40 days. Molecular identification was carried out using two pairs of primers for ITS regions and TEF-1 gene. Based on the results of morphological and molecular identification, as well as pathogenicity tests, it was confirmed that Phytophthora capsici pathogen was the causal agent of stem rot in chili plants collected from Sindangjaya Village. Further study is needed to determine the spread of the disease, damage, and yield loss caused by stem rot disease, as well as how to prevent and control the disease.</p>

scholarly journals An elusive new species of gymnophthalmid lizard (Cercosaurinae, Selvasaura) from the Andes of northern Peru

2021 ◽  
Vol 5 (2) ◽  
pp. 177-187
Author(s):  
Lourdes Y. Echevarría ◽  
Pablo J. Venegas ◽  
Luis A. García-Ayachi ◽  
Pedro M. Sales Nunes
Keyword(s):  
New Species ◽  
Natural History ◽  
Phylogenetic Analyses ◽  
Morphological Characters ◽  
The Other ◽  
Adult Males ◽  
The Andes ◽  
New States ◽  
Northern Peru ◽  
A New Species

We describe a new species of Selvasaura from the montane forests of the eastern slopes of the Andes in northern Peru, based on external and hemipenial morphological characters and previous phylogenetic analyses. The new species can be differentiated from the other two Selvasaura species in having keeled dorsal scales usually flanked by longitudinal striations, in adults and juveniles; adult males with a yellow vertebral stripe bordered by broad dark brown stripes on each side and a unilobed hemipenis surrounded by the branches of the sulcus spermaticus. The description of the new species contributes information about new states of diagnostic characters of Selvasaura and natural history.

Quechua’s Southern Boundary: The Case of Santiago del Estero, Argentina

2012 ◽  
Author(s):  
ELIZABETH DeMARRAIS
Keyword(s):  
Colonial Period ◽  
Archaeological Record ◽  
The South ◽  
Population Movements ◽  
Southern Boundary ◽  
North West ◽  
Documentary Sources ◽  
The Andes ◽  
Continued Use

This chapter examines the far southern boundary of Quechua's spread throughout the Andes. It argues that Quechua reached north-west Argentina in Inka times and that it was widely used during the colonial period as well. The rationale for this argument is based primarily on evidence for (1) the extent of Inka resettlements in Argentina; (2) the nature of Inka relations with local peoples in the far south; and (3) continued use of Quechua under the Spaniards, as described in the documentary sources. Less clear are the precise population movements that brought Quechua speakers initially to Santiago del Estero, as the archaeological record suggests that the Inka frontier lay higher up the slopes in the provinces of Salta, Jujuy, Tucumán, and Catamarca, where the majority of Inka installations are found. The documents reveal that activities of the Spaniards had further, far-reaching consequences for Quechua's presence in the south Andes, and that ultimately Quechua was replaced in most of north-west Argentina by Spanish.

Taxonomic status of Andersen’s fruit-eating bat (Artibeus jamaicensis aequatorialis) and revised classification of Artibeus (Chiroptera: Phyllostomidae)

Zootaxa ◽  
2010 ◽  
Vol 2648 (1) ◽  
pp. 45 ◽  
Author(s):  
PETER A. LARSEN ◽  
MARÍA R. MARCHÁN-RIVADENEIRA ◽  
ROBERT J. BAKER
Keyword(s):  
Taxonomic Status ◽  
Morphological Characters ◽  
Species Level ◽  
South American ◽  
Reciprocal Monophyly ◽  
Dna Variation ◽  
The Andes ◽  
Artibeus Jamaicensis ◽  
Phylogenetic Studies

Fruit-eating bats of the genus Artibeus are widely distributed across the Neotropics and are one of the most recently evolved assemblages of the family Phyllostomidae. Although the taxonomy and systematics of species of Artibeus has been the subject of an intense historical debate, the most current taxonomic arrangements recognize approximately eleven species within the genus. However, recent phylogenetic studies indicate that species diversity within South and Middle American populations of Artibeus is underestimated. South American populations referable to A. jamaicensis aequatorialis are of considerable interest because previous studies of mitochondrial DNA variation identified potential species level variation west of the Andes Mountains. In this study we use morphometric and genetic data (nuclear AFLPs) to investigate the taxonomic status of A. j. aequatorialis. Our results indicate that elevating aequatorialis to species level is appropriate based on statistically supported reciprocal monophyly in mitochondrial and nuclear datasets and diagnostic morphological characters. In light of our results, and of those presented elsewhere, we provide a revised classification of the genus.

scholarly journals The last one: A new species of Osteocephalus (Anura: Hylidae) from Colombia, with comments on the morphological and behavioral diversity within the genus

2019 ◽  
Vol 18 (2) ◽  
pp. 141-157 ◽  
Author(s):  
William E. Duellman
Keyword(s):  
New Species ◽  
Reproductive Behavior ◽  
Morphological Characters ◽  
Undescribed Species ◽  
Black Stripe ◽  
Behavioral Diversity ◽  
The Andes ◽  
Golden Yellow ◽  
A New Species ◽  
Yellow Iris

A new species of Osteocephalus (Anura: Hylidae) from Colombia, with comments on the morphological and behavioral diversity within the genus. A striking, undescribed species of Osteocephalus from the Amazonian slopes of the Andes in Departamento de Putumayo in southern Colombia is a member of the Osteocephalus buckleyi Group. Aside from minor morphological characters, the new species differs from all other members of the group by having a golden yellow iris with a median horizontal black stripe. The diversity in morphological and reproductive behavior reveals various features that are phylogenetically signifcant, but several species remain to be described.

New lectotypifications and new synonyms in Festuca (Poaceae, Pooideae, Loliinae) from the Central Andes

Phytotaxa ◽  
2016 ◽  
Vol 247 (4) ◽  
pp. 247 ◽  
Author(s):  
JUAN C. OSPINA
Keyword(s):  
Morphological Characters ◽  
Central Andes ◽  
Andes Mountains ◽  
Valid Species ◽  
Second Step ◽  
New Synonyms ◽  
The Andes ◽  
New Synonym ◽  
Differential Characters ◽  
Anatomical Characters

New lectotypifications and new synonyms are provided as a result of a systematic study of the genus Festuca from the Central Andes. In the Andes mountains of Argentina, Bolivia, and Chile, several species of Festuca are dominant components of the grasslands and high Andean steppes. Festuca circinata and F. dissitiflora occur in this area and were described based on morphological characters. Some authors have considered F. circinata as a valid species while others have treated it as a synonym of F. dissitiflora, together with F. dissitiflora var. loricata , F. dissitiflora var. villipalea, and F. erecta var. aristulata. In this study, a review of the taxonomy and nomenclature of F. castilloniana, F. circinata, and F. potosiana was performed, and their morphological and anatomical characters were compared with F. dissitiflora. Based on morphoanatomical and epidermal characters, this study contributes to the delimitation of F. circinata and F. dissitiflora. Nomenclatural notes and new anatomical and epidermal descriptions are included for these species. Differential characters between F. circinata and F. dissitiflora are discussed and F. circinata is restored as a valid species for Argentina. Festuca castilloniana and F. potosiana are synonymised under F. dissitiflora. Festuca dissitiflora var. loricata, F. dissitiflora var. villipalea, and F. erecta var. aristulata are excluded from the synonymy of F. dissitiflora and it is suggested that these names should be subordinate under F. fiebrigii. Festuca stuckertii is proposed as a new synonym of F. uninodis. Lectotypes are designated for the names F. argentinensis, F. dissitiflora, F. nemoralis and F. parodii, and second-step lectotypes are designated for the names F. circinata and F. ampliflora.

scholarly journals Morphometric and phylogenetic analyses of Serpentirhabdias viperidicus n. sp. (Nematoda: Rhabdiasidae) from the lancehead snake Bothrops moojeni Hoge, 1966 (Reptilia: Serpentes: Viperidae) in Brazil

2016 ◽  
Vol 91 (3) ◽  
pp. 360-370 ◽  
Author(s):  
D.H. Morais ◽  
A. Aguiar ◽  
M.I. Müller ◽  
R.B. Narciso ◽  
L.A.F. da Silva ◽  
...  
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Morphological Characters ◽  
Neotropical Region ◽  
South American ◽  
Paulo State ◽  
Molecular Approaches ◽  
Molecular Phylogenetic ◽  
Bothrops Moojeni ◽  
A New Species

AbstractSerpentirhabdias viperidicus n. sp. (Nematoda: Rhabdiasidae) is described from the lungs of the ‘Brazilian lancehead’ Bothrops moojeni (Hoge, 1966) from the savannah in São Paulo State, Brazil. The new species is the eighth species of Serpentirhabdias described in the Neotropical region, and differs from other species mainly by a combination of characters: lips slightly notable, presence of fine striations at posterior ends, presence of two parallel lines with intercalated pores, a pore-shaped phasmid situated at the level of the anal aperture and another two in the posterior half of the tail. It is the first species of Serpentirhabdias reported in this snake host and the second species of this genus found parasitizing South American viperidian snakes. Molecular phylogenetic analysis using ribosomal (ITS and 28S partial) genes confirms Serpentirhabdias viperidicus n. sp. as a new species that clustered in the Serpentirhabdias clade, sister taxon to Serpentirhabdias fuscovenosa and Serpentirhabdias elaphe. This is the first description of Serpentirhabdias species from Brazil using molecular approaches and morphological characters to confirm the monophyly of this recent genus.

scholarly journals Phylogenetic, Morphological, and Pathogenic Characterization of Alternaria Species Associated with Fruit Rot of Blueberry in California

2015 ◽  
Vol 105 (12) ◽  
pp. 1555-1567 ◽  
Author(s):  
X. Q. Zhu ◽  
C. L. Xiao
Keyword(s):  
Dna Sequences ◽  
Central Valley ◽  
Morphological Characters ◽  
Fruit Rot ◽  
Postharvest Quality ◽  
Plasma Membrane Atpase ◽  
Factors Affecting ◽  
Molecular Approaches ◽  
Alternaria Species ◽  
Pathogenicity Tests

Fruit rot caused by Alternaria spp. is one of the most important factors affecting the postharvest quality and shelf life of blueberry fruit. The aims of this study were to characterize Alternaria isolates using morphological and molecular approaches and test their pathogenicity to blueberry fruit. Alternaria spp. isolates were collected from decayed blueberry fruit in the Central Valley of California during 2012 and 2013. In total, 283 isolates were obtained and five species of Alternaria, including Alternaria alternata, A. tenuissima, A. arborescens, A. infectoria, and A. rosae, were identified based on DNA sequences of the plasma membrane ATPase, Alt a1 and Calmodulin gene regions in combination with morphological characters of the culture and sporulation. Of the 283 isolates, 61.5% were identified as A. alternata, 32.9% were A. arborescens, 5.0% were A. tenuissima, and only one isolate of A. infectoria and one isolate of A. rosae were found. These fungi were able to grow at temperatures from 0 to 35°C, and mycelial growth was arrested at 40°C. Optimal radial growth occurred between 20 to 30°C. Pathogenicity tests showed that all five Alternaria spp. were pathogenic on blueberry fruit at 0, 4, and 20°C, with A. alternata, A. arborescens, and A. tenuissima being the most virulent species, followed by A. infectoria and A. rosae. Previously A. tenuissima has been reported to be the primary cause of Alternaria fruit rot of blueberry worldwide. Our results indicated that the species composition of Alternaria responsible for Alternaria fruit rot in blueberry can be dependent on geographical region. A. alternata, A. arborescens, A. infectoria, and A. rosae are reported for the first time on blueberry in California. This is also the first report of A. infectoria and A. rosae infecting blueberry fruit.

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