A widely accepted definition of marine pollution is “the introduction by man, directly or indirectly, of substances or energy into the marine environment (including estuaries) resulting in such deleterious effects as harm to living resources, hazards to human health, hindrance to marine activities including fishing, impairment of the quality for use of seawater, and reduction of amenities”. (Wells et al. 2002). This differs from contamination since it results in biological damage, whether to the natural or human system, whereas contamination can be regarded merely as the introduction of substances by human activities (McLusky and Elliott 2004). Furthermore, pollution and pollutants can refer to biological and physical materials as well as chemicals (Gray 1992, Elliott 2003). In the case of the benthos, there is an extensive literature indicating that every type of pollutant has an effect on the benthos and so it is not surprising that the benthos is the mainstay of any monitoring and investigative programme. Pollution can affect organisms living in sediments by physical variables associated with the pollution source, such as increased sedimentation of particles, which leads to smothering of the fauna. In such cases the effect can in fact be regarded as a disturbing factor if the effects lead to mortality of individuals (Gray 1992). Alternatively, pollution can affect the fauna by toxicity where increased concentrations of contaminants lead to biochemical and physiological effects and ensuing mortality if certain thresholds for adaptation are exceeded. Here, however, we first treat the effects of the most widespread form of pollution affecting the marine environment— increased organic matter in sediments. Excess organic matter enters the marine environment principally as sewage, although it can also include waste from paper pulp mills or changed river run-off, for example. Excess organic matter causes physical effects such as smothering and also leads to reduced oxygen concentrations in the water column or pore-water in sediments. Sewage discharged into confined bodies of water frequently leads to the well-known symptoms termed eutrophication, resulting, in the most extreme cases, in a total lack of oxygen and the presence of hydrogen sulfide in the sediment, with a corresponding absence of fauna (e.g. de Jonge and Elliott 2001).