It is not plants alone – Protozoic silica and its role in terrestrial silicon cycling

2021 ◽  
Author(s):  
Daniel Puppe
Keyword(s):  
Agricultural Soils ◽  
Terrestrial Ecosystems ◽  
Building Blocks ◽  
Testate Amoebae ◽  
Global Scale ◽  
Laboratory Research ◽  
Testate Amoeba ◽  
Agricultural Plant ◽  
Beneficial Effects ◽  
Plant Soil

<p>Biogenic silicon (BSi) has been found to play a fundamental role in the link between global Si and carbon cycles, because it represents a key factor in the control of Si fluxes from terrestrial to aquatic ecosystems. Furthermore, various beneficial effects of Si accumulation in plants have been revealed, i.e., increased resistance against abiotic and biotic stresses. Thus Si is of great importance for agricultural plant-soil systems. Due to intensified land use humans directly influence Si cycling on a global scale. For example, Si exports through harvested crops and increased erosion rates generally lead to a Si loss in agricultural systems with implications for Si bioavailability in agricultural soils, which is controlled by BSi to a great extent. However, while corresponding research on phytogenic BSi (i.e., BSi synthesized by plants) has been established for decades now, studies dealing with protozoic BSi (i.e., BSi synthesized by testate amoebae) have been conducted just recently. By reviewing these studies I found them to indicate that testate amoebae might play a key role in Si cycling in terrestrial ecosystems. Actually, annual biosilicification rates of idiosomic testate amoebae are comparable to or even exceed annual Si uptake rates of trees. Furthermore, it is most likely that total protozoic Si pools (considering not only intact shells but also single idiosomes, the building blocks of testate amoeba shells) are much bigger than given in publications yet, because it can be assumed that idiosomes most likely can be as stable as phytoliths (representing the phytogenic Si pool in soils), and thus are well preserved in soils. Consequently, it would be not surprising if total protozoic Si pool quantities (shells plus single idiosomes) would be found to equal phytogenic Si pool quantities in soils. With my contribution I would like to encourage further field and laboratory research to verify this assumption and gain a deeper understanding of Si cycling by testate amoebae in terrestrial ecosystems.</p>

Past testate amoeba communities in landslide mountain fens (Polish Carpathians): The relationship between shell types and sediment

The Holocene ◽  
2021 ◽  
pp. 095968362199464
Author(s):  
Katarzyna Marcisz ◽  
Krzysztof Buczek ◽  
Mariusz Gałka ◽  
Włodzimierz Margielewski ◽  
Matthieu Mulot ◽  
...  
Keyword(s):  
Environmental Changes ◽  
Testate Amoebae ◽  
Mineral Matter ◽  
Testate Amoeba ◽  
Run Off ◽  
Number Of Factors ◽  
Depth To Water Table ◽  
Polish Carpathians ◽  
The Relationship

Landslide mountain fens formed in landslide depressions are dynamic environments as their development is disturbed by a number of factors, for example, landslides, slopewash, and surface run-off. These processes lead to the accumulation of mineral material and wood in peat. Disturbed peatlands are interesting archives of past environmental changes, but they may be challenging for providing biotic proxy-based quantitative reconstructions. Here we investigate long-term changes in testate amoeba communities from two landslide mountain fens – so far an overlooked habitat for testate amoeba investigations. Our results show that abundances of testate amoebae are extremely low in this type of peatlands, therefore not suitable for providing quantitative depth-to-water table reconstructions. However, frequent shifts of dominant testate amoeba species reflect dynamic lithological situation of the studied fens. We observed that high and stable mineral matter input into the peatlands was associated with high abundances of species producing agglutinated (xenosomic) as well as idiosomic shells which prevailed in the testate amoeba communities in both analyzed profiles. This is the first study that explores testate amoebae of landslide mountain fens in such detail, providing novel information about microbial communities of these ecosystems.

scholarly journals Reduced resilience of terrestrial ecosystems locally is not reflected on a global scale

2021 ◽  
Vol 2 (1) ◽  
Author(s):  
Yuhao Feng ◽  
Haojie Su ◽  
Zhiyao Tang ◽  
Shaopeng Wang ◽  
Xia Zhao ◽  
...  
Keyword(s):  
Climate Change ◽  
Global Climate Change ◽  
Vegetation Index ◽  
Global Climate ◽  
Terrestrial Ecosystem ◽  
Terrestrial Ecosystems ◽  
Global Scale ◽  
Ecological Resilience ◽  
Terrestrial Vegetation ◽  
Ecosystem Resilience

AbstractGlobal climate change likely alters the structure and function of vegetation and the stability of terrestrial ecosystems. It is therefore important to assess the factors controlling ecosystem resilience from local to global scales. Here we assess terrestrial vegetation resilience over the past 35 years using early warning indicators calculated from normalized difference vegetation index data. On a local scale we find that climate change reduced the resilience of ecosystems in 64.5% of the global terrestrial vegetated area. Temperature had a greater influence on vegetation resilience than precipitation, while climate mean state had a greater influence than climate variability. However, there is no evidence for decreased ecological resilience on larger scales. Instead, climate warming increased spatial asynchrony of vegetation which buffered the global-scale impacts on resilience. We suggest that the response of terrestrial ecosystem resilience to global climate change is scale-dependent and influenced by spatial asynchrony on the global scale.

Global scale hydrological modelling at 100 m, 1 h resolution, in Python

2021 ◽  
Author(s):  
Kor de Jong ◽  
Marc van Kreveld ◽  
Debabrata Panja ◽  
Oliver Schmitz ◽  
Derek Karssenberg
Keyword(s):  
Large Scale ◽  
Model Building ◽  
Flow Direction ◽  
Building Blocks ◽  
Global Scale ◽  
Data Availability ◽  
Hydrological Models ◽  
Continental Scale ◽  
Modelling Framework ◽  
Scale Models

<p>Data availability at global scale is increasing exponentially. Although considerable challenges remain regarding the identification of model structure and parameters of continental scale hydrological models, we will soon reach the situation that global scale models could be defined at very high resolutions close to 100 m or less. One of the key challenges is how to make simulations of these ultra-high resolution models tractable ([1]).</p><p>Our research contributes by the development of a model building framework that is specifically designed to distribute calculations over multiple cluster nodes. This framework enables domain experts like hydrologists to develop their own large scale models, using a scripting language like Python, without the need to acquire the skills to develop low-level computer code for parallel and distributed computing.</p><p>We present the design and implementation of this software framework and illustrate its use with a prototype 100 m, 1 h continental scale hydrological model. Our modelling framework ensures that any model built with it is parallelized. This is made possible by providing the model builder with a set of building blocks of models, which are coded in such a manner that parallelization of calculations occurs within and across these building blocks, for any combination of building blocks. There is thus full flexibility on the side of the modeller, without losing performance.</p><p>This breakthrough is made possible by applying a novel approach to the implementation of the model building framework, called asynchronous many-tasks, provided by the HPX C++ software library ([3]). The code in the model building framework expresses spatial operations as large collections of interdependent tasks that can be executed efficiently on individual laptops as well as computer clusters ([2]). Our framework currently includes the most essential operations for building large scale hydrological models, including those for simulating transport of material through a flow direction network. By combining these operations, we rebuilt an existing 100 m, 1 h resolution model, thus far used for simulations of small catchments, requiring limited coding as we only had to replace the computational back end of the existing model. Runs at continental scale on a computer cluster show acceptable strong and weak scaling providing a strong indication that global simulations at this resolution will soon be possible, technically speaking.</p><p>Future work will focus on extending the set of modelling operations and adding scalable I/O, after which existing models that are currently limited in their ability to use the computational resources available to them can be ported to this new environment.</p><p>More information about our modelling framework is at https://lue.computationalgeography.org.</p><p><strong>References</strong></p><p>[1] M. Bierkens. Global hydrology 2015: State, trends, and directions. Water Resources Research, 51(7):4923–4947, 2015.<br>[2] K. de Jong, et al. An environmental modelling framework based on asynchronous many-tasks: scalability and usability. Submitted.<br>[3] H. Kaiser, et al. HPX - The C++ standard library for parallelism and concurrency. Journal of Open Source Software, 5(53):2352, 2020.</p>

Polystyrene Microplastics Interaction with Oryza sativa: Toxicity and Metabolic Mechanism

2021 ◽  
Author(s):  
Jiani Wu ◽  
Weitao Liu ◽  
Aurang Zeb ◽  
Jiapan Lian ◽  
Yuebing Sun ◽  
...  
Keyword(s):  
Oryza Sativa ◽  
Agricultural Soils ◽  
Higher Plants ◽  
Terrestrial Ecosystems ◽  
Rice Seedlings ◽  
Metabolic Mechanism

Little is known about the microplastic effects in terrestrial ecosystems, especially agricultural soils and terrestrial higher plants. Here, rice seedlings were exposed to two different sized polystyrene (PS) microplastics (100...

scholarly journals On the potential vegetation feedbacks that enhance phosphorus availability – insights from a process-based model linking geological and ecological timescales

2014 ◽  
Vol 11 (13) ◽  
pp. 3661-3683 ◽  
Author(s):  
C. Buendía ◽  
S. Arens ◽  
T. Hickler ◽  
S. I. Higgins ◽  
P. Porada ◽  
...  
Keyword(s):  
Biomass Production ◽  
Primary Productivity ◽  
Chemical Weathering ◽  
Production Efficiency ◽  
Root Exudation ◽  
Terrestrial Ecosystems ◽  
Global Scale ◽  
P Uptake ◽  
P Availability ◽  
P Limitation

Abstract. In old and heavily weathered soils, the availability of P might be so small that the primary production of plants is limited. However, plants have evolved several mechanisms to actively take up P from the soil or mine it to overcome this limitation. These mechanisms involve the active uptake of P mediated by mycorrhiza, biotic de-occlusion through root clusters, and the biotic enhancement of weathering through root exudation. The objective of this paper is to investigate how and where these processes contribute to alleviate P limitation on primary productivity. To do so, we propose a process-based model accounting for the major processes of the carbon, water, and P cycles including chemical weathering at the global scale. Implementing P limitation on biomass synthesis allows the assessment of the efficiencies of biomass production across different ecosystems. We use simulation experiments to assess the relative importance of the different uptake mechanisms to alleviate P limitation on biomass production. We find that active P uptake is an essential mechanism for sustaining P availability on long timescales, whereas biotic de-occlusion might serve as a buffer on timescales shorter than 10 000 yr. Although active P uptake is essential for reducing P losses by leaching, humid lowland soils reach P limitation after around 100 000 yr of soil evolution. Given the generalized modelling framework, our model results compare reasonably with observed or independently estimated patterns and ranges of P concentrations in soils and vegetation. Furthermore, our simulations suggest that P limitation might be an important driver of biomass production efficiency (the fraction of the gross primary productivity used for biomass growth), and that vegetation on old soils has a smaller biomass production rate when P becomes limiting. With this study, we provide a theoretical basis for investigating the responses of terrestrial ecosystems to P availability linking geological and ecological timescales under different environmental settings.

Geochemical peat records from the Great Vasyugan Mire and Tomsk region, Siberia. Regional temporal trend of human impact over the last 500 years and local perturbations.

2021 ◽  
Author(s):  
Simon Hutchinson ◽  
Andrei Diaconu ◽  
Sergey Kirpotin ◽  
Angelica Feurdean
Keyword(s):  
Trace Element ◽  
Forest Cover ◽  
Human Impacts ◽  
Global Scale ◽  
Testate Amoeba ◽  
Dust Deposition ◽  
Peat Core ◽  
Element Concentrations ◽  
Local Perturbations ◽  
Geochemical Profile

<p>Although interest in peatland environments, especially in terms of their carbon storage, has gained momentum in response to a heightened awareness of the climate emergency; significant gaps remain in the geographical coverage of our knowledge of mires, including some major wetland systems. This paucity has implications, not only for our understanding of their development and functioning, but also for adequately predicting future changes and thus providing effective mire environmental management. Our INTERACT-supported study provides radiometrically dated, well-characterised millennial scale peat records from two contrasting undisturbed and impacted (ditched) ombrotrophic sites in the Great Vasyugan Mire (GVM) near Tomsk, Siberia and two additional mesotrophic sites to the east of the Ob river. In addition, the geochemical record was complemented by multiproxy palaeoecological characterisation (pollen, charcoal, stable isotopes, testate amoeba). We identified both natural (lithogenic) and anthropogenic geochemical signals recording human impacts with site specific variations. Elevated trace element concentrations in the peat profiles align with the region’s wider agricultural and economic development following the colonisation of Siberia by Russia (from ca. 1600 AD) when pollen assemblages indicate the decline of forest cover and an increase in human disturbance, including the use for fire. Trace element concentrations peak with the subsequent, post WWII industrialisation of regional centres in southern Siberia (after 1950 AD). On a global scale, our sites, together with evidence from the few other comparable studies in the region, suggest that the region’s peatlands are relatively uncontaminated by human activities with a mean lead (Pb) level of < 5 mg/kg. However, via lithogenic elements including Rb, Ti and Zr, we detected both a geochemical signal as a result of historical land cover changes enhancing mineral dust deposition following disturbance, as well as fossil fuel derived pollutants as relatively elevated, subsurface As and Pb concentrations of ca. 10 and 25 mg/kg respectively with the development of industry in the region. Nevertheless, the potential significance of local factors on the sites’ geochemical profile is also highlighted. For example, we identify the effects of past peat drainage for afforestation (ca. 1960s) and the scheme’s subsequent abandonment. Although the region’s mire systems are remote and vast, they appear to hold a legacy of human activity that can be detected as a geochemical signal supporting the inferences of other palaeoenvironmental proxies. Such geochemical peat core records, from Eurasia in particular, remain relatively scarce in the international scientific literature and therefore, as yet, inadequately characterised and quantified compared to other regions.</p>

The spatio-temporal evolution of groundwater dependent precipitation

2021 ◽  
Author(s):  
Cristina Passet ◽  
Lan Wang-Erlandsson ◽  
Yoshihide Wada ◽  
Agnes Pranindita ◽  
Agatha De Boer
Keyword(s):  
Temporal Evolution ◽  
Groundwater Resources ◽  
Terrestrial Ecosystems ◽  
Global Scale ◽  
Groundwater Abstraction ◽  
Groundwater Availability ◽  
Basin Scale ◽  
The Usa ◽  
Spatio Temporal ◽  
Selection Of

<div><span>A<strong> </strong>substantial portion of groundwater abstracted from aquifers is used for irrigation and evaporated to the atmosphere, potentially contributing towards downwind precipitation. While the fate of evaporation fluxes from land have been analysed, the atmospheric pathways of evaporation originating from groundwater have not yet been globally quantified. This study analysed the geographical distribution, the seasonality and the magnitude of groundwater-dependent precipitation (Pgw) </span><span>at a global scale and for a selection of countries and river basins. The Eulerian moisture tracking WAM-2layers model was used to process meteorological and groundwater abstraction input data from 1980 to 2010.  Results show considerable contributions of groundwater to precipitation downwind of the most heavily irrigated areas, leading to net groundwater losses over these areas. Globally, 40% of the Pgw </span><span>precipitates directly in the oceans, and do not contribute to biomass production in terrestrial ecosystems. Some of the countries with the highest rates of groundwater abstraction (India, the USA, Pakistan and Iran), receive low volumes of Pgw </span><span>and are net losers of groundwater resources. The countries with the highest net gain of groundwater are China, Canada and Russia. At river basin scale, the Indus, Ganges and Mississippi basins are net losers of groundwater to downwind Pgw</span><span>, while the Yangtze, Tarim and Brahmaputra basins receive more Pgw </span><span>than their groundwater withdrawals. The share of precipitation that originates from groundwater varies considerably with seasons, and can be especially high when low local precipitation levels occur in combination with high upwind groundwater abstraction. Furthermore, precipitation dependence on </span><span>groundwater (ρgw)</span><span>, has steadily increased between 1980 to 2010 in all studied areas and globally. Our study suggests that the countries and basins with a high and increasing dependency on ρgw </span><span>to support their precipitation can be vulnerable to groundwater availability upwind.</span></div>

scholarly journals Ozone affects plant, insect, and soil microbial communities: A threat to terrestrial ecosystems and biodiversity

2020 ◽  
Vol 6 (33) ◽  
pp. eabc1176 ◽  
Author(s):  
Evgenios Agathokleous ◽  
Zhaozhong Feng ◽  
Elina Oksanen ◽  
Pierre Sicard ◽  
Qi Wang ◽  
...  
Keyword(s):  
Plant Competition ◽  
Root Exudation ◽  
Soil Microbial Communities ◽  
Alpha Diversity ◽  
Terrestrial Ecosystems ◽  
Insect Communities ◽  
Soil Microbial ◽  
Plant Soil ◽  
Equatorial Africa ◽  
Insect Interactions

Elevated tropospheric ozone concentrations induce adverse effects in plants. We reviewed how ozone affects (i) the composition and diversity of plant communities by affecting key physiological traits; (ii) foliar chemistry and the emission of volatiles, thereby affecting plant-plant competition, plant-insect interactions, and the composition of insect communities; and (iii) plant-soil-microbe interactions and the composition of soil communities by disrupting plant litterfall and altering root exudation, soil enzymatic activities, decomposition, and nutrient cycling. The community composition of soil microbes is consequently changed, and alpha diversity is often reduced. The effects depend on the environment and vary across space and time. We suggest that Atlantic islands in the Northern Hemisphere, the Mediterranean Basin, equatorial Africa, Ethiopia, the Indian coastline, the Himalayan region, southern Asia, and Japan have high endemic richness at high ozone risk by 2100.

scholarly journals Global signal of top-down control of terrestrial plant communities by herbivores

2018 ◽  
Vol 115 (24) ◽  
pp. 6237-6242 ◽  
Author(s):  
Shihong Jia ◽  
Xugao Wang ◽  
Zuoqiang Yuan ◽  
Fei Lin ◽  
Ji Ye ◽  
...  
Keyword(s):  
Plant Communities ◽  
Meta Analysis ◽  
Terrestrial Ecosystems ◽  
Global Scale ◽  
Basic Site ◽  
Plant Interactions ◽  
Top Down ◽  
Plant Abundance ◽  
Terrestrial Plant ◽  
Positive Effects

The theory of “top-down” ecological regulation predicts that herbivory suppresses plant abundance, biomass, and survival but increases diversity through the disproportionate consumption of dominant species, which inhibits competitive exclusion. To date, these outcomes have been clear in aquatic ecosystems but not on land. We explicate this discrepancy using a meta-analysis of experimental results from 123 native animal exclusions in natural terrestrial ecosystems (623 pairwise comparisons). Consistent with top-down predictions, we found that herbivores significantly reduced plant abundance, biomass, survival, and reproduction (allP< 0.01) and increased species evenness but not richness (P= 0.06 andP= 0.59, respectively). However, when examining patterns in the strength of top-down effects, with few exceptions, we were unable to detect significantly different effect sizes among biomes, based on local site characteristics (climate or productivity) or study characteristics (study duration or exclosure size). The positive effects on diversity were only significant in studies excluding large animals or located in temperate grasslands. The results demonstrate that top-down regulation by herbivores is a pervasive process shaping terrestrial plant communities at the global scale, but its strength is highly site specific and not predicted by basic site conditions. We suggest that including herbivore densities as a covariate in future exclosure studies will facilitate the discovery of unresolved macroecology trends in the strength of herbivore–plant interactions.

Do the relationships between testate amoebae and fungi reflect the variability of past water table fluctuations in the ombrotrophic peatlands of Central Europe?

The Holocene ◽  
2020 ◽  
Vol 30 (8) ◽  
pp. 1186-1195
Author(s):  
Piotr Kołaczek ◽  
Monika Karpińska-Kołaczek ◽  
Mariusz Gałka ◽  
Grażyna Miotk-Szpiganowicz ◽  
Milena Obremska ◽  
...  
Keyword(s):  
Central Europe ◽  
Water Table ◽  
Pollen Analysis ◽  
Calluna Vulgaris ◽  
Testate Amoebae ◽  
Cold Climate ◽  
Testate Amoeba ◽  
Additional Information ◽  
Sphagnum Peat ◽  
Climate Events

In this article, we examined the indicative value of a relationship between two non-pollen palynomorphs (NPPs), fungal HdV-10, related to the presence of Calluna vulgaris, and HdV-31A, which is testate amoeba – Archerella flavum. Both are frequently present on slides designated for pollen analysis, prepared from Sphagnum peat. We analysed three profiles from three extensive ombrotrophic peatlands in northern Poland, in which the content of testate amoebae (TA) was examined and TA-inferred depth to the water table (DWT) was reconstructed. The new analysis of palynological samples regarding NPPs revealed that strong increases in HdV-10 content were mostly simultaneous to HdV-31A declines. However, the relations between both types were not statistically significant. The rapid increases in HdV-10, despite the fact that this type of conidiospores is related to drier habitats on peatlands, were tentatively interpreted as an indicator of rapid rises in the water table level which, in consequence, might have stimulated the production of these spores by fungi. In addition, a negative correlation between HdV-31A and Arcella discoides and positive one, but weaker, in case of HdV-10 (attributed by some authors to species Trichocladium opacum (Corda) S Hughes) and A. discoides show a link between mutual fluctuations of both NPPs and hydrological instabilities on peatland. The Bagno Kusowo bog, the westernmost peatland subjected to the study, displayed an intriguing agreement between the presence of peat sections with strong increases in HdV-10 and cold climate events affecting Europe. Our study reveals that counting even a limited number of NPP types during the standard pollen analysis of Sphagnum peat may support the interpretation of results, especially, in cases when the investigation lacks testate amoeba analysis. When the reconstruction of TA-inferred DWT is provided, it may introduce additional information about the patterns of hydrological dynamics.

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