Effect of lubricants on the rotational transmission between solid-state gears

Lubricants are widely used in macroscopic mechanical systems to reduce friction and wear. However, on the microscopic scale, it is not clear to what extent lubricants are beneficial. Therefore, in this study, we consider two diamond solid-state gears at the nanoscale immersed in different lubricant molecules and perform classical MD simulations to investigate the rotational transmission of motion. We find that lubricants can help to synchronize the rotational transmission between gears regardless of the molecular species and the center-of-mass distance. Moreover, the influence of the angular velocity of the driving gear is investigated and shown to be related to the bond formation process between gears.

Microrheology to Understand the Viscosity Behavior of a Sophorolipid Biosurfactant

The microstructure of the aqueous solutions of purified acidic Sophorolipid (SL) has previously been studied using highly sophisticated methods such as SANS and Cryo-TEM. We were interested in whether (a) the main findings also apply to commercially available SL (which is a mixture of acidic and lactonic SL) and (b) more readily available methods such as DLS can be used to gain insight into the molecular aggregation of SL. Our work was motivated by the increasing interest in biosurfactants for applications in personal and household care. Moreover, the origin behind the more or less lack of rheological response to changes in pH is of practical relevance, as it is somewhat unusual for a carboxylate-group containing surfactant. By using DLS microrheology, we could elucidate the aggregation structure and dynamics of the surfactant on a microscopic scale. Surprisingly, the different degrees of protonation only impacted the microscopic properties such as exchange kinetics and the plateau values of the storage moduli.

Preliminary Analysis of a Nano Relativistic Motor

In a recent paper discussing Newton’s third law in the framework of special relativity for charged bodies, it was suggested that one can construct a practical relativistic motor provided high enough charge and current densities are available. As on the macroscopic scale charge density is limited by the phenomena of dielectric breakdown, it was suggested to take advantage of the high charge densities which are available on the microscopic scale. A preliminary analysis of this option denoted "nano relativistic scale" is studied in the current paper.

Erosion of tungsten marker layers in W7-X

In order to get first insight into net tungsten erosion in W7-X, tungsten (W) marker layers were exposed during the operational phase OP 1.2b at one position of the Test Divertor Unit (TDU), at 21 different positions of the inner heat shield, and at two scraper elements. The maximum tungsten erosion rate at the TDU strike line was 0.13 nm/s averaged over the whole campaign. The erosion was inhomogeneous on a microscopic scale, with higher erosion on ridges of the rough surface inclined towards the plasma and deposition of hydrocarbon layers in the recessed areas of the rough surface. The W erosion at the inner heat shield was below the detection limit of 3 – 6x1012 W-atoms/cm2s, and all inner heat shield tiles were covered with a thin B/C/O layer with thickness in the range 2x1017 – 1018 B + C atoms/cm2 (about 20 – 100 nm B + C). W-erosion of the marker layers on the scraper elements was also below the detection limit.

Programmable viscoelasticity in protein-RNA condensates with disordered sticker-spacer polypeptides

Liquid-liquid phase separation of multivalent proteins and RNAs drives the formation of biomolecular condensates that facilitate membrane-free compartmentalization of subcellular processes. With recent advances, it is becoming increasingly clear that biomolecular condensates are network fluids with time-dependent material properties. Here, employing microrheology with optical tweezers, we reveal molecular determinants that govern the viscoelastic behavior of condensates formed by multivalent Arg/Gly-rich sticker-spacer polypeptides and RNA. These condensates behave as Maxwell fluids with an elastically-dominant rheological response at shorter timescales and a liquid-like behavior at longer timescales. The viscous and elastic regimes of these condensates can be tuned by the polypeptide and RNA sequences as well as their mixture compositions. Our results establish a quantitative link between the sequence- and structure-encoded biomolecular interactions at the microscopic scale and the rheological properties of the resulting condensates at the mesoscale, enabling a route to systematically probe and rationally engineer biomolecular condensates with programmable mechanics.

Microscopic and Macroscopic Fragmentation Characteristics under Hypervelocity Impact Based on MD and SPH Method

This work investigates the difference in the fragmentation characteristics between the microscopic and macroscopic scales under hypervelocity impact, with the simulations of Molecular Dynamics (MD) and Smoothed Particle Hydrodynamics (SPH) method. Under low shock intensity, the model at microscopic scale exhibits good penetration resistance due to the constraint of strength and surface tension. The bullet is finally embedded into the target, rather than forming a typical debris cloud at macroscopic scale. Under high shock intensity, the occurrence of unloading melting of the sample reduces the strength of the material. The material at the microscopic scale has also been completely penetrated. However, the width of the ejecta veil and external bubble of the debris cloud are narrower. In addition, the residual velocity of bullet, crater diameter and expansion angle of the debris cloud at microscopic scale are all smaller than those at macroscopic scale, especially for low-velocity conditions. The difference can be as much as two times. These characteristics indicate that the degree of conversion of kinetic energy to internal energy at the microscopic scale is much higher than that of the macroscopic results. Furthermore, the MD simulation method can further provide details of the physical characteristics at the micro-scale. As the shock intensity increases, the local melting phenomenon becomes more pronounced, accompanied by a decrease in dislocation atoms and a corresponding increase in disordered atoms. In addition, the fraction of disordered atoms is found to increase exponentially with the increasing incident kinetic energy.

Familiarize Your Students with Life at the Microscopic Scale

Developing students’ understanding of cells and the microscopic scale is an important goal of biology education. Cells are the building blocks of multicellular organisms, and most of Earth’s biodiversity is found at the microscopic scale. Developing an understanding of the microscopic scale requires that students use their quantitative reasoning skills. Here, resources are presented that help students develop their quantitative reasoning skills and improve their understanding of the small scale of microscopic life. The crosscutting concept, Scale, Proportion, and Quantity, and the science and engineering practice, Using Mathematics and Computational Thinking, are highlighted. The development of students’ quantitative reasoning skills in biology is universally recognized as an important outcome of biology education.

Multi-scale Monte Carlo simulations of gold nanoparticle-induced DNA damages for kilovoltage X-ray irradiation in a xenograft mouse model using TOPAS-nBio

Background Gold nanoparticles (AuNPs) are considered as promising agents to increase the radiosensitivity of tumor cells. However, the biological mechanisms of radiation enhancement effects of AuNPs are still not well understood. We present a multi-scale Monte Carlo simulation framework within TOPAS-nBio to investigate the increase of DNA damage due to the presence of AuNPs in mouse tumor models. Methods A tumor was placed inside a voxel mouse model and irradiated with either 100-kVp or 200-kVp X-ray beams. Phase spaces were employed to transfer particles from the macroscopic (voxel) scale to the microscopic scale, which consists of a cell geometry including a detailed mouse DNA model. Radiosensitizing effects were calculated in the presence and absence of hybrid nanoparticles with a $$\text{Fe}_2\text{O}_3$$ Fe 2 O 3 core surrounded by a gold layer (AuFeNPs). To simulate DNA damage even for very small energy tracks, Geant4-DNA physics and chemistry models were used on microscopic scale. Results An AuFeNP-induced enhancement of both dose and DNA strand breaks has been established for different scenarios. Produced chemical radicals including hydroxyl molecules, which were assumed to be responsible for DNA damage through chemical reactions, were found to be significantly increased. We further observed a dependency of the results on the location of the cells within the tumor for 200-kVp X-ray beams. Conclusion Our multi-scale approach allows to study irradiation-induced physical and chemical effects on cells. We showed a potential increase in cell radiosensitization caused by relatively small concentrations of AuFeNPs. Our new methodology allows the individual adjustment of parameters in each simulation step and therefore can be used for other studies investigating the radiosensitizing effects of AuFeNPs or AuNPs in living cells.