Epidemic networks and potential sources of bacterial wilt infection in a potato seed network in Kenya.

Potato seed systems in Kenya are largely informal, characterized by high seed degeneration due to the buildup of seed- and soil-borne diseases, including bacterial wilt caused by Ralstonia solanacearum. Informal sources of seed include neighbors, local markets and farmer-saved seed, and present a risk for spread and establishment of disease. To understand the larger context of potato disease risk in Kenya, we used network analysis to evaluate (1) epidemic risk through potato trade networks centered around East Africa, and (2) locations in East Africa likely to be particularly important for epidemic management because of their high potato cropland connectivity. We evaluated the interactions of the key stakeholders in a potato seed system and used network analysis to identify locations that are likely to be important for the spread of infection of R. solanacearum in a potato seed distribution network in Meru, Kenya. Household details, seed sources, quantities sold, pest incidence and management practices, knowledge about seed degeneration and farmers' sources of information on potato production were obtained and analyzed. The survey revealed that self-saved, neighbors, seed companies, friends, exchange, and markets are the main seed sources. Only 43% of total seed transacted was certified. Users of uncertified seeds have high disease risk, and this is an especially important risk if their roles in the network give them the potential to be 'superspreaders' of disease.

Genetic diversity of sessile oak populations in the Czech Republic

The sessile oak is a broadleaved tree species of great ecological and silvicultural importance. Oaks are the second most widespread deciduous tree species in the Czech Republic, and ongoing climate change negatively affects the abundant and often monocultural Norway spruce. Therefore, a proportional increase of more resilient tree species such as sessile oak has emerged. This study aimed to depict population genetic diversity when analysing 272 individuals from 10 subpopulations selected across the Czech Republic. Targeted populations were chosen based on the minimal expected human impact on the stand (presumably autochthonous stands). All individuals were genotyped using 18 polymorphic microsatellite markers (SSRs) assembled into two amplification multiplexes. The high discriminatory power of SSR markers was tested and confirmed by the probability of identity analysis. The genetic differentiation of the subpopulations was low yet significant, quantified by Wright’s F-statistics within the range from 0.012 to 0.029. Based on discriminant analysis of principal components (DAPC), we detected two populations with geographic genetic correlation (the 15^th meridian east being a north-south boundary line) and one with a distinct genetic pattern. We assume that the population might previously be established from seed sources outside the Czech Republic. Moreover, to some extent, our findings advocate the legitimacy of the legislative rules for forest reproductive material (FRM) transfer.

Schinus Terebinthifolia Raddi: A Comparative Framework On Population Genetic Structure In A Restored Area After 12 Years*

The success of restoration projects depends upon the genetic diversity of the implanted species. It is a limiting factor, often because the seed sources are immersed in highly fragmented landscapes. This work was carried out to compare the genetic diversities of the juveniles and the adult trees of Schinus terebinthifolia Raddi in a mixed reforestation area, both in the restoration process and in the remaining natural area in the Atlantic Forest. Through five SSR primers, it was observed that the implanted population showed a greater genetic diversity index (He) (0.553 adults and 0.505 juveniles) when compared to the wild population (0.487 adults and 0.483 juveniles). It indicated that the forested area was established with individuals of high genetic diversity. There was a reduction of genetic diversity, with the loss of exclusive alleles and maintenance of inbreeding and coancestry in the juveniles of the reforested population. It can be inferred that there was a low gene flow among the fragments. The effective population size in both populations (adults and juveniles) was lower than that recommended for conserving populations in the short and long terms. These results have shown that continuous monitoring of this particular area is of absolute necessity and for applying techniques that can promote the connectivity of the fragments. It would allow for a more significant reduction of genetic drift and the persistence of the planted populations.

Seed sourcing for climate-resilient grasslands: the role of seed source diversity during early restoration establishment

Restoration often advocates for the use of local seed in restoration, however increasingly new strategies have been proposed to incorporate diverse sources to maintain evolutionary potential within seed mixes. Increasing seed sources per species within a seed mix should increase genetic variation, however, few empirical studies have evaluated how seed source diversity impacts plant community composition following restoration. Thus, the goal of this research was to compare the use of single or multi-source seed mix treatments to plant community diversity following restoration. Using 14 species commonly applied in grassland restoration, we examined plant community diversity following restoration comparing seed mixes with either one or five sources per species across two restoration sites in Minnesota and South Dakota, United States. Following seeding, species establishment and abundance were recorded to calculate plant diversity for each seed mix treatment. There were no major effects of seed mix treatment on community emergence and diversity observed, with the majority of plant establishment reflecting non-seeded species. However, site-specific differences were observed. Heterogeneous land-use history associated with the Minnesota site likely contributed to differences across the restoration treatments. In contrast, community diversity at the South Dakota site was homogeneous across seed mix treatments with changes in plant community influenced solely by early season species establishment. This suggests land-use history irrespective of seed mix treatment influences establishment and persistence, particularly in the first year following restoration. Future monitoring across seasons will be needed to evaluate if community diversity changes in response to seed mix treatment.

Farmers' Sources and Varieties of Cassava Planting Materials in Coastal Kenya

Cassava (Manihot esculenta Crantz) grows in diverse agro-ecological zones. In Kenya, it is widely cultivated in Western and Coastal regions. It is mainly grown for food and nutrition security and excess roots are sold to generate income for the farm households. Its productivity per unit of the land area is high compared to maize and wheat which are staple crops in the country. However, scarcity of cassava planting materials and pests and diseases limit production in these regions. This study aimed at revealing the sources and varieties of cassava planting materials used by farmers and other farmers' practices in coastal Kenya. Four focus group discussions (FGD) and a survey were conducted in 2018, using a semi-structured questionnaire targeting 250 farmers. The data collected on the sources of planting materials, preferred varieties and the practices employed by the farmers in cassava production, was analyzed using descriptive statistics. Majority of farmers (83%) interviewed indicated that they recycled planting materials from the previous crop while some 67% respondents obtained the planting material from their neighbors. Kenya Agricultural and Livestock Research Organization's (KALRO) and the local markets were reported as sources of planting materials by 11 and 5% farmer respondents, respectively. The only formal seed source reported was KALRO. The rest, own seed, neighbors, and the local markets, were informal seed sources. Piecemeal harvesting practiced by 98% of the farmers favored planting material recycling. Farmers dedicated a small proportion of their land (mean 0.2 ha) to cassava production as reported by 60 and 72.8% of farmers from Taita Taveta and Kilifi, respectively. Slightly above half (56%) of the farmers in Kilifi dedicated slightly more land to cassava, planting between 100 and 4,000 cuttings (2.5% of an acre up to a full acre) compared to 87% farmers from Taita Taveta who planted 100 cuttings or less (which is about 2.5% of an acre or less). A majority (81.1%) of farmers in Taita Taveta planted local cassava varieties compared to Kilifi's 57.8%. Slightly above half of the farmer respondents reported Kibandameno as the preferred variety followed by Tajirika as the second preferred variety as reported by 18% farmers. Kibandameno was preferred for its sweet taste by 75.6% farmers while Tajirika was preferred by 52.4% farmers because of the high yielding capacity. Nearly all farmer respondents, in Taita Taveta County obtained the planting material from informal seed sources, except a negligible number, who reported buying their planting material from KALRO, a formal seed source, far from their locality. Farmers sourcing cuttings from a formal seed source such as those from Kilifi County were more likely to use a tractor for land preparation compared to those who sourced planting materials informally who more likely had scarce knowledge on cassava production and the value of cassava. Therefore, interventions to establish a sustainable healthy cassava planting materials seed system are needed to address the systemic constraint and help develop a viable cassava value chain.

Characterizing cassava farmer typologies and their seed sourcing practices to explore opportunities for economically sustainable seed business models in Rwanda

The overdependency on local cassava varieties and informal seed sources by farmers in Rwanda has contributed to the spread of cassava viral diseases. The use of improved planting materials made available through formal seed sources, that assure seed quality, is one way to prevent future disease outbreaks. In order to increase the availability of, and farmers access to, such materials there is increasing interest to develop seed business models. This study aims to understand seed sourcing practices of different farm typologies to inform the development of tailored seed business models. A total of 390 farmers were interviewed and the collected data was analyzed into clusters, resulting in seven farm typologies. Seed sourcing strategies, seed replacement dynamics and purchasing behavior of these typologies were explored via a seed tracing study. We find that more commercial oriented farmers have better access to formal seed sources. Nevertheless, the majority of farmers in all typologies accessed new varieties and quality cassava seed via informal channels. At both formal and informal sources, cash investments in seed were mainly made by the categories of better-off farmers, and were one-time investments to acquire a new variety. Based on farmers current seed sourcing practices, clarifications on the differences between farmers and their willingness-to-pay, the roles of seed degeneration, cost-benefit analysis, value propositions and profit formulas seem important requirements for the further development of viable cassava seed business models. We conclude that tailoring seed business models can have a high potential as it acknowledges differences among farmers, but that careful coordination is needed to ensure that one approach or intervention does not contrast with and/or undermine the others.

Why farmers use so many different maize varieties in West Kenya

In this article we reflect on the discussions as to whether breeding and seed system development should proceed along its current well established route of developing varieties with a higher agricultural productivity or if the diversity of farmers, their contexts and rationales requires broader approaches. We make use of data from a recently held survey (2018) in West Kenya. The data show that some 80% of the households in the survey planted both local and hybrid maize varieties. The choices that people make about which variety to plant are many. Apart from rainfall, the availability of cash, the promise of a good yield, the presence of projects and programs and the culture of seed also influences these choices. We argue that an inclusive demand-oriented maize breeding and seed system needs to include a range of varieties and seed sources and to develop and support different delivery pathways to fit farmers’ diverse use of seeds and varieties. Our findings also indicate the need for more systematic study of the diversity of farmers’ rationales and the performance of crop varieties. This would provide useful information for all the actors involved.

Accelerating Adaptation of Forest Trees to Climate Change Using Individual Tree Response Functions

In forest tree breeding, assisted migration has been proposed to accelerate the adaptive response to climate change. Response functions are currently fitted across multiple populations and environments, enabling selections of the most appropriate seed sources for a specific reforestation site. So far, the approach has been limited to capturing adaptive variation among populations, neglecting tree-to-tree variation residing within a population. Here, we combined the response function methodology with the in-situ breeding approach, utilizing progeny trials of European larch (Larix decidua) across 21 test sites in Austria ranging from Alpine to lowland regions. We quantified intra-population genetic variance and predicted individual genetic performance along a climatic gradient. This approach can be adopted in most breeding and conservation programs, boosting the speed of adaptation under climate change.

Seed germination response of Indian wild pear (Pyrus pashia) to gibberellic acid treatment and cold storage

Knowledge of seed germination behaviour of different seed sources of tree species is useful in selecting the most responsive and adaptive ones for propagation and germplasm conservation. The wild Himalayan pear (Pyrus pashia Buch-Ham ex D. Don) produces highly nutritious edible fruits that are consumed by local communities. The populations of the species are threatened due to exploitation and lack of adequate conservation programmes. The study was conducted to examine the germination response of P. pashia seeds from two sources (S1-Champawat and S2-Pithoragarh) in Uttarakhand state of India, to different GA3 treatment and also to assess the viability and longevity of the seeds in cold storage (5 °C) for three years. In both sources germination percent (GP) increased significantly under GA3 treatment and speed of germination was also enhanced (reduction in mean germination time). In Source, 1 GP increased under all GA3 application, highest being 94% under GA3 500 ppm treatment. In Source 2, GP of seeds doubled under 100 ppm GA3 treatment while its higher concentrations did not improve the germination. However, the differences observed in germination between the seed sources could be due to differences in the dormancy levels and/or sensitivity to dormancy breaking elements across their geographical range. Thus, exogenous application of GA3 is suggested for enhancing the germination in seeds of P. pashia. Seeds responded to cold storage by increased germination with duration, i.e. highest after three years in storage, indicating that the seeds got the required chilling treatment for overcoming dormancy.