Microarray spot partitioning by autonoumsly organising maps thorugh contour model

In cDNA microarray image analysis, classification of pixels as forefront area and the area covered by background is very challenging. In microarray experimentation, identifying forefront area of desired spots is nothing but computation of forefront pixels concentration, area covered by spot and shape of the spots. In this piece of writing, an innovative way for spot partitioning of microarray images using autonomously organizing maps (AOM) method through C-V model has been proposed. Concept of neural networks has been incorpated to train and to test microarray spots.In a trained AOM the comprehensive information arising from the prototypes of created neurons are clearly integrated to decide whether to get smaller or get bigger of contour. During the process of optimization, this is done in an iterative manner. Next using C-V model, inside curve area of trained spot is compared with test spot finally curve fitting is done.The presented model can handle spots with variations in terms of shape and quality of the spots and meanwhile it is robust to the noise. From the review of experimental work, presented approach is accurate over the approaches like C-means by fuzzy, Morphology sectionalization.

Vertical flow assays based on core–shell SERS nanotags for multiplex prostate cancer biomarker detection

A core–shell SERS nanotag based VFA with a single test spot for multiplex biomarker detection at pg mL−1 level with a wide LDR.

Diagnosis Research on Main Bearing Wear of Gasoline Engines in Mechanical Engineering

The different clearances of main bearing of previously designed on EQ6100 model gasoline engine is diagnosed by means of vibration monitoring mechanism. Breakdown signals of main test on different speed, clearance of main bearing, test spot and weather were analyzed by Spectral Analysis method and compared with normal and abnormal vibration signals. As a result, the characteristic parameters and the identifying methods of breakdown are given. In addition, the problems of fault detection are pointed out.

MOST Spacebased Photometry of HD 189733: Precise Timing Measurements for Transits Across an Active Star

We have measured transit times for HD 189733 passing in front of its bright (V = 7.67) chromospherically active and spotted parent star. Nearly continuous broadband photometry of this system was obtained with the MOST (Microvariability & Oscillations of STars) space telesope during 21 days in August 2006, monitoring 10 consecutive transits. We have used these data to search for deviations from a constant orbital period which can indicate the presence of additional planets in the system that are as yet undetected by Doppler searches. We find no variations above the level of ±45 s, ruling out planets in the Earth-to-Neptune mass range in a number of resonant orbits. We find that a number of complications can arise in measuring transit times for a planet transiting an active star with large star spots. However, such transiting systems are also useful in that they can help to constrain and test spot models. This has implications for the large number of transiting systems expected to be discovered by the CoRoT and Kepler missions.

Hyperoxia, hyperglycemia, and photoreceptor sensitivity in normal and diabetic subjects

The aim of this study was to investigate the effects of an increase in the saturation of blood oxygen (SaO2) and/or serum glucose on photoreceptor sensitivity in normal subjects and in patients with diabetes mellitus. We monitored cone and rod sensitivity by recording dark-adaptation curves to both green and red test stimuli while inhaling either air (20% O2 + 80% N2) or 100% oxygen in 12 normal subjects and 12 diabetic patients with no (10) or mild (2) retinopathy. We also repeated the experiment in 10 of the normal subjects under hyperglycemia (mean serum glucose: 161 mg/dl). Results show that in normal subjects the dark-adapted cone sensitivity is improved by an increase in SaO2 or by hyperglycemia. Final rod sensitivity is unchanged during hyperoxia and during hyperglycemia when measured with a green test spot. However the kinetics of dark adaptation are altered during hyperglycemia, and an increase in final sensitivity is observed when measured with the red test spot. Inhalation of oxygen during hyperglycemia in normal subjects reduces cone sensitivity compared to that found during hyperglycemia alone (Pasteur effect). In diabetic subjects the dark-adapted cone threshold is comparable to that found in normal subjects, and sensitivity also increases with an increase in SaO2. The final rod threshold, however, is impaired compared to that of the control group, and rod sensitivity is improved by increasing the SaO2. The results suggest that the metabolism of rods and cones may differ in normal subjects: in cones, the rate of metabolism can be augmented by increasing the available oxygen or glucose, whereas rods appear more insensitive to increased blood oxygen saturation and hyperglycemia. In diabetic subjects, both cone and rod metabolism can be increased by supplemental oxygen, indicative of an early rod deficit. The study lends weight to the hypothesis that dark-adapted rods in diabetics are hypoxic before the onset of retinopathy.

Photopigment optical density of the human foveola and a paradoxical senescent increase outside the fovea

Photopigment optical density (OD) of middle-(M) and long-(L) wavelength-sensitive cones was determined to evaluate the hypothesis that reductions in the amount of photopigment are responsible for age-dependent sensitivity losses of the human cone pathways. Flicker thresholds were measured at the peak and tail of the photoreceptor's absorption spectrum as a function of the intensity of a bleaching background. Photopigment OD was measured at 0 (fovea), 2, 4, and 8 deg in the temporal retina by use of a 0.3-deg-diameter test spot. Seventy-two genetically characterized dichromats were studied so that the L- and M-cones could be analyzed separately. Subjects included 28 protanopes with M- but no L-cones and 44 deuteranopes with L- but no M-cones (all male, age range 12–29 and 55–83 years). Previous methods have not provided estimates of photopigment OD for separate cone classes in the foveola. In this study, it was found that foveolar cones are remarkably efficient, absorbing 78% of the available photons (OD = 0.65). Photopigment OD decreased exponentially with retinal eccentricity independently of age and cone type. Paradoxically, the OD of perifoveal cones increased significantly with age. Over the 70-year age range of our participants, the perifoveal M- and L-cones showed a 14% increase in capacity to absorb photons despite a 30% decrease in visual sensitivity over the same period.

Contextual influences on the directional responses of tectal cells in pigeons

Contrary to the traditional view that receptive fields are limited in spatial extent, recent studies have indicated that the response of neurons to a local stimulus within the receptive field can be modulated by stimulation of the surrounding region. Here we quantified the nature of these contextual effects on visual motion responses of neurons in the pigeon's optic tectum using standard extracellular recording techniques. All of the cells tested responded well to a test spot moving across their receptive fields. When a background pattern was moved in the same or in a similar direction as that of the test spot, the responses of most deep tectal neurons to the test spot were maximally inhibited. Movement of the background in the opposite or near opposite direction produced minimal inhibition or even facilitation. For some deep tectal neurons, this directionally selective modulation by the moving background was maintained when the background motion was paired with different movement directions of the test spot (including both the preferred and least preferred directions). Thus, this selectivity for opposing motion was independent of the absolute direction of either the test spot or the background, a finding which is consistent with the results reported by Frost and Nakayama (1983), although they did not include all test spot directions. For some other neurons, identified here for the first time, the background movement selectively modulated the response only when the test spot moved in the neuron's preferred directions. These neurons lost selectivity for opposing motion when the test spot moved in nonpreferred directions. The significance of these contextual effects on the motion response of tectal neurons may be related to how the brain distinguishes self-induced motion from object motion and segregates figure from ground.