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Complexity ◽  
2021 ◽  
Vol 2021 ◽  
pp. 1-19
Author(s):  
Hua Xu ◽  
Minggang Wang

Carbon price fluctuation is affected by both internal market mechanisms and the heterogeneous environment. Moreover, it is a complex dynamic evolution process. This paper focuses on carbon price fluctuation trend prediction. In order to promote the accuracy of the forecasting model, this paper proposes the idea of integrating network topology information into carbon price data; that is, carbon price data are mapped into a complex network through a visibility graph algorithm, and the network topology information is extracted. The extracted network topology structure information is used to reconstruct the data, which are used to train the model parameters, thus improving the prediction accuracy of the model. Five prediction models are selected as the benchmark model, and the price data of the EU and seven pilot carbon markets in China from June 19, 2014, to October 9, 2020, are chosen as the sample for empirical analysis. The research finds that the integration of network topology information can significantly improve the price trend prediction of the five benchmark models for the EU carbon market. However, there are great differences in the accuracy improvement effects of China’s seven pilot carbon market price forecasts. Moreover, the forecasting accuracy of the four carbon markets (i.e., Guangdong, Chongqing, Tianjin, and Shenzhen) has improved slightly, but the prediction accuracy of the carbon price trend in Beijing, Shanghai, and Hubei has not improved. We analyze the reasons leading to this result and offer suggestions to improve China’s pilot carbon market.


Author(s):  
Xing-Li Jing ◽  
Mao-Bin Hu ◽  
Cong-Ling Shi ◽  
Xiang Ling

The study of traffic dynamics on couple networks is important for the design and management of many real systems. In this paper, an efficient routing strategy on coupled spatial networks is proposed, considering both traffic characteristics and network topology information. With the routing strategy, the traffic capacity can be greatly improved in both scenarios of identical and heterogeneous node capacity allocation. Heterogeneous allocation strategy of node delivery capacity performs better than identical capacity allocation strategy. The study can help to improve the performance of real-world multi-modal traffic systems.


2021 ◽  
Vol 12 ◽  
Author(s):  
Xiaoting Wang ◽  
Nan Zhang ◽  
Yulan Zhao ◽  
Juan Wang

Motivation: A protein complex is the combination of proteins which interact with each other. Protein–protein interaction (PPI) networks are composed of multiple protein complexes. It is very difficult to recognize protein complexes from PPI data due to the noise of PPI.Results: We proposed a new method, called Topology and Semantic Similarity Network (TSSN), based on topological structure characteristics and biological characteristics to construct the PPI. Experiments show that the TSSN can filter the noise of PPI data. We proposed a new algorithm, called Neighbor Nodes of Proteins (NNP), for recognizing protein complexes by considering their topology information. Experiments show that the algorithm can identify more protein complexes and more accurately. The recognition of protein complexes is vital in research on evolution analysis.Availability and implementation: https://github.com/bioinformatical-code/NNP.


2021 ◽  
Vol 8 ◽  
Author(s):  
Suraj Mishra ◽  
Ya Xing Wang ◽  
Chuan Chuan Wei ◽  
Danny Z. Chen ◽  
X. Sharon Hu

From diagnosing cardiovascular diseases to analyzing the progression of diabetic retinopathy, accurate retinal artery/vein (A/V) classification is critical. Promising approaches for A/V classification, ranging from conventional graph based methods to recent convolutional neural network (CNN) based models, have been known. However, the inability of traditional graph based methods to utilize deep hierarchical features extracted by CNNs and the limitations of current CNN based methods to incorporate vessel topology information hinder their effectiveness. In this paper, we propose a new CNN based framework, VTG-Net (vessel topology graph network), for retinal A/V classification by incorporating vessel topology information. VTG-Net exploits retinal vessel topology along with CNN features to improve A/V classification accuracy. Specifically, we transform vessel features extracted by CNN in the image domain into a graph representation preserving the vessel topology. Then by exploiting a graph convolutional network (GCN), we enable our model to learn both CNN features and vessel topological features simultaneously. The final predication is attained by fusing the CNN and GCN outputs. Using a publicly available AV-DRIVE dataset and an in-house dataset, we verify the high performance of our VTG-Net for retinal A/V classification over state-of-the-art methods (with ~2% improvement in accuracy on the AV-DRIVE dataset).


2021 ◽  
Vol 11 (21) ◽  
pp. 9832
Author(s):  
Junhui Chen ◽  
Feihu Huang ◽  
Jian Peng

Heterogeneous graph embedding has become a hot topic in network embedding in recent years and has been widely used in lots of practical scenarios. However, most of the existing heterogeneous graph embedding methods cannot make full use of all the auxiliary information. So we proposed a new method called Multi-Subgraph based Graph Convolution Network (MSGCN), which uses topology information, semantic information, and node feature information to learn node embedding vector. In MSGCN, the graph is firstly decomposed into multiple subgraphs according to the type of edges. Then convolution operation is adopted for each subgraph to obtain the node representations of each subgraph. Finally, the node representations are obtained by aggregating the representation vectors of nodes in each subgraph. Furthermore, we discussed the application of MSGCN with respect to a transductive learning task and inductive learning task, respectively. A node sampling method for inductive learning tasks to obtain representations of new nodes is proposed. This sampling method uses the attention mechanism to find important nodes and then assigns different weights to different nodes during aggregation. We conducted an experiment on three datasets. The experimental results indicate that our MSGCN outperforms the state-of-the-art methods in multi-class node classification tasks.


Author(s):  
Federico Franzoni ◽  
Xavier Salleras ◽  
Vanesa Daza

AbstractOver the past decade, the Bitcoin P2P network protocol has become a reference model for all modern cryptocurrencies. While nodes in this network are known, the connections among them are kept hidden, as it is commonly believed that this helps protect from deanonymization and low-level attacks. However, adversaries can bypass this limitation by inferring connections through side channels. At the same time, the lack of topology information hinders the analysis of the network, which is essential to improve efficiency and security. In this paper, we thoroughly review network-level attacks and empirically show that topology obfuscation is not an effective countermeasure. We then argue that the benefits of an open topology potentially outweigh its risks, and propose a protocol to reliably infer and monitor connections among reachable nodes of the Bitcoin network. We formally analyze our protocol and experimentally evaluate its accuracy in both trusted and untrusted settings. Results show our system has a low impact on the network, and has precision and recall are over 90% with up to 20% of malicious nodes in the network.


Author(s):  
H. Kiavarz ◽  
M. Jadidi ◽  
A. Rajabifard ◽  
G. Sohn

Abstract. Nowadays, cities and buildings are increasingly interconnected with new modern data models like the 3D city model and Building Information Modelling (BIM) for urban management. In the past decades, BIM appears to have been primarily used for visualization. However, BIM has been recently used for a wide range of applications, especially in Building Energy Consumption Estimation (BECE). Despite extensive research, BIM is less used in BECE data-driven approaches due to its complexity in the data model and incompatibility with machine learning algorithms. Therefore, this paper highlights the potential opportunity to apply graph-based learning algorithms (e.g., GraphSAGE) using the enriched semantic, geometry, and room topology information extracted from BIM data. The preliminary results are demonstrated a promising avenue for BECE analysis in both pre-construction step (design) and post-construction step like retrofitting processes.


Complexity ◽  
2021 ◽  
Vol 2021 ◽  
pp. 1-12
Author(s):  
Zhiwei Wang ◽  
Liguo Weng ◽  
Min Lu ◽  
Jun Liu ◽  
Lingling Pan

Maintaining accuracy and robustness has always been an unsolved problem in the task of power grid branch parameter identification. Therefore, many researchers have participated in the research of branch parameter identification. The existing methods of power grid branch parameter identification suffer from two limitations. (1) Traditional methods only use manual experience or instruments to complete parameter identification of single branch characteristics, but they are only used to identify a single target and cannot make full use of the historical information of power grid data. (2) Deep learning methods can complete model training through historical data, but these methods cannot consider the constraints of power grid topological structure, which is equivalent to identifying connected power grid branches separately. To overcome these limitations, we propose a novel multitask Graph Transformer Network (GTN), which combines a graph neural network and a multiattention mechanism to construct our model. Specifically, we input the global features and topology information of branch nodes into our GTN model. In the process of parameter identification, the multihead attention mechanism is used to fuse the branch feature information of different subspaces, which highlights the importance of different branches and enhances the ability of local feature extraction. Finally, the fitting and prediction of each branch feature are completed through the decoding layer. The experiment shows that our proposed GTN is superior to other machine learning methods and deep learning methods and can still realize accurate branch parameter identification under various noise conditions.


2021 ◽  
Vol 17 (8) ◽  
pp. e1009278
Author(s):  
Govindarajan Sudha ◽  
Claudio Bassot ◽  
John Lamb ◽  
Nanjiang Shu ◽  
Yan Huang ◽  
...  

CPA/AT transporters are made up of scaffold and a core domain. The core domain contains two non-canonical helices (broken or reentrant) that mediate the transport of ions, amino acids or other charged compounds. During evolution, these transporters have undergone substantial changes in structure, topology and function. To shed light on these structural transitions, we create models for all families using an integrated topology annotation method. We find that the CPA/AT transporters can be classified into four fold-types based on their structure; (1) the CPA-broken fold-type, (2) the CPA-reentrant fold-type, (3) the BART fold-type, and (4) a previously not described fold-type, the Reentrant-Helix-Reentrant fold-type. Several topological transitions are identified, including the transition between a broken and reentrant helix, one transition between a loop and a reentrant helix, complete changes of orientation, and changes in the number of scaffold helices. These transitions are mainly caused by gene duplication and shuffling events. Structural models, topology information and other details are presented in a searchable database, CPAfold (cpafold.bioinfo.se).


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