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Blood ◽  
2021 ◽  
Vol 138 (Supplement 1) ◽  
pp. 4000-4000
Author(s):  
Adam Bagg ◽  
Philipp Raess ◽  
Deborah Rund ◽  
Darrin Jengehino ◽  
Joanna Wiszniewska ◽  
...  

Abstract Background. We report here a trial in progress for the evaluation of a novel system aimed to provide an all-digital standardized bone marrow aspirate (BMA) analysis, Scopio Labs X100, empowered by artificial intelligence (AI) based cell pre-classification. Current methods for the analysis and reporting of BMA specimens are based on analog microscopy, as whole slide imaging at x100 magnification is not practically available. The lack of uniformity between experts in the field, originating from a subjective manual review, can lead to inconsistencies in disease diagnosis and classification, and thereby affect treatment and clinical outcomes. For example, ICSH and WHO guidelines require that at least 500 cells should be counted in at least two smears when a precise percentage of an abnormal cell type is required for diagnosis and classification. It is also recommended that in order reduce imprecision from sampling error, the total number of cells counted in the differential should be increased, specifically if the abnormal cell count is very close to a critical threshold for disease stratification or response assessment. For the general evaluation of hematopoiesis, Myeloid to Erythroid (M:E) ratio is reported. Considering the complexity of the manual BMA analysis, even more so in routine laboratory settings with competitive turnaround times, a digital transformation can sustain the desired standardization, and increase sensitivity and efficiency in routine workflow. Study Design and Methods. This multisite study is taking place at: Hospital of the University of Pennsylvania (HUP), Oregon Health and Science University (OHSU), and Tel Aviv Sourasky Medical Center (TASMC). BMA analysis is performed with a manual microscope as the reference arm and in Scopio Labs X100 Full Field BMA application as the test arm (Figure 1A). Two hematopathologists at each site independently review 265 BMA specimens, including 205 with a Romanowsky stain and 60 with a Prussian Blue stain, in both the test and the reference arms. There is a 3 week washout period between arms (Figure 1B, right). ICSH guidelines were rigorously translated into a comprehensive report format used in both study arms. The report presents 27 primary and 13 secondary characteristics for the morphological assessment of BMA (Figure 1C). These include evaluation of specimen quality, evaluation of count, maturation and morphology of trilineage hematopoietic elements (myeloid, erythroid and megakaryocytic), as well as lymphocytes and plasma cells. For a repeatability study, 8 representative samples are analyzed through 20 days, 2 daily runs and 2 replicas in one site. For reproducibility study, 8 representative samples are analyzed in all sites for 5 days with 5 replicas (Figure 1B, left). The collected BMA samples hold a distribution of 55.61% males, with 2.02%, 9.46%, 16.39%, 54.73% and 17.40% of ages 13-21, 22-39, 40-55, 56-75 and >75 respectively. All samples were diagnosed by WHO criteria. Diagnoses include AML, ALL, MPN, MDS, PCN, lymphoid neoplasms, aplastic anemia, ITP and normal morphology marrow and hemodiluted samples. All samples were retrieved from the sites' bone marrow sample storage. For the method comparison study, the primary and secondary characteristics are aggregated into three primary and secondary evaluation categories of specimen quality, count, and morphology and maturation assessments (Figure 1B, left, 1C). For the primary groups, confusion matrix will be produced. For the secondary groups, contingency tables will be generated (Figure 1B, left). For the repeatability and reproducibility (R&R) studies, two-way nested ANOVA tables will be created (Figure 1, right). Primary groups will be measured for accuracy in the form of efficiency, sensitivity and specificity. Secondary groups will be measured for overall agreement. R&R will be measured for SD and CV. The introduction of Scopio's full field morphological evaluation of BMA smears, promotes an accurate diagnosis of hematological disorders including hematological malignancies, and enables a remote evaluation of BMA smears. By reviewing the entire BMA smear, and by counting a very large number of cells, this novel approach provides a new and highly accurate tool for early detection of pathological conditions, including residual disease following therapy. Figure 1 Figure 1. Disclosures Bagg: Scopio Labs: Research Funding. Raess: Scopio Labs: Research Funding. Jengehino: Scorpio Labs: Other: Partial Salary Support. Wiszniewska: Scopio Labs: Research Funding. Huynh: Scorpio Labs: Other: Salary Support. Fan: Scopio Labs: Research Funding. Bhattacharyya: Scorpio Labs: Other: Partial Salary Support. Avivi: Novartis: Speakers Bureau; Kite, a Gilead Company: Speakers Bureau. Katz: Scopio Labs: Consultancy.


2021 ◽  
Author(s):  
Marie Darmon-Novello ◽  
Julien Adam ◽  
Laurence Lamant ◽  
Maxime Battistella ◽  
Nicolas Ortonne ◽  
...  

Abstract Background: Melanoma is a type of cancer with robust response to immunotherapy. Programmed death ligand 1 (PD-L1) testing is not required to treat patients, but most studies have demonstrated correlations between PD-L1 expression and treatment response using various assays and scoring methods. This multicenter study aimed to harmonize PD-L1 immunohistochemistry (IHC) and scoring in melanoma. To provide a reference for PD-L1 expression independent of the IHC protocol, PD-L1 mRNA expression was determined via RNAscope, then compared to IHC.Methods: Standardized PD-L1 assays (22C3, 28–8, SP142, and SP263) and laboratory-developed tests (clone QR1 and 22C3) were evaluated on three IHC platforms using a training set of 7 cases. mRNA expression was determined via RNAscope (CD274/PD-L1 probe) and analyzed by image analysis. PD-L1 IHC findings were scored by seven blinded pathologists using the tumor proportion score (TPS), combined positive score (CPS), and MELscore. After the study, a standardized method was proposed; this was validated by three blinded pathologists on a set of 40 metastatic melanomas that were stained using three protocols.Results: Concordances among various antibody/platforms were high across antibodies (e.g., intraclass correlation coefficient [ICC] > 0.80 for CPS), except for SP142. Two levels of immunostaining intensities were observed: high (QR1 and SP263) and low (28–8, 22C3, and SP142). Reproducibilities across pathologists were higher for QR1 and SP263 (ICC ≥ 0.87 and ≥ 0.85 for TPS and CPS, respectively). QR1, SP263, and 28-8 showed the highest concordance with mRNA expression (ICC ≥ 0.81 for CPS). Accordingly, we proposed a standardized method for PD-L1 immunodetection and scoring, then tested it on 40 metastatic melanomas. This method included analysis of specimen quality (e.g., host-tumor interface and pigmentation). Concordances among antibodies were excellent for all criteria, and concordances among pathologists were better for the MELscore than for other scores.Conclusion: Harmonization of PD-L1 staining and scoring in melanomas with good concordance is achievable using the PD-L1 IHC protocols applied to other cancers; this reproducible approach can simplify daily practice. Our proposal for a PD-L1 standardized methodology has higher reproducibility across pathologists for clinical and research use.


2021 ◽  
Vol 116 (3) ◽  
pp. e220
Author(s):  
Jessica Garcia de Paredes ◽  
Michael Strug ◽  
Marcos Cordoba ◽  
Mili Thakur ◽  
Emma Giuliani

2021 ◽  
Vol 9 (3) ◽  
pp. 324-332 ◽  
Author(s):  
H. Al Hosani ◽  
M. Salah ◽  
D. Saade ◽  
H. Osman ◽  
J. Al Zahid

To evaluate the United Arab Emirate National Newborn Screening Programme we compared coverage, timeliness of programme indicators [age at sampling, recall and treatment initiation, timing of specimen delivery and laboratory results] and specimen quality with international st and ards. Recall rate, sensitivity, specificity, positive predictive values and relative incidence rates for phenylketonuria [PKU] and congenital hypothyroidism [CH] were calculated. Investigations for hypothyroidism included thyroid function studies [T3, T4, fT4 and TSH], technetium-99m thyroid scan when possible and thyroglobulin and thyroid antibodies when indicated. PKU investigations included plasma amino acids and measurement of biopterin defects. In the 6 years before December 2000, 138, 718 neonates were screened. Relative incidences for CH and for classic PKU were 1: 1570 and 1: 20, 050 respectively


2021 ◽  
pp. jclinpath-2020-207366
Author(s):  
Sidhant Seth ◽  
Ewan H Forrest ◽  
Judith M Morris ◽  
Mathis Heydtmann ◽  
Prakash Konanahalli ◽  
...  

AimsTo evaluate our medical liver pathology practice and its influence on patient management, using audit templates published by the UK Royal College of Pathologists (RCPath).MethodsWe audited medical liver biopsies reported in our centre in 2019 using RCPath proformas. Data were collected from pathology reports and corresponding electronic patient record.Results60 cases were selected for audit from 135 eligible biopsies reported in 2019. 58/60 cases were core biopsies and 2/60 were laparoscopic wedge biopsies. 53/57 (93%) core biopsies with available data met RCPath adequacy criteria (length >15 mm and/or ≥6 portal tracts). Most reports (57/60; 95%) were judged to have helped patient management. 25/60 (42%) biopsy reports helped to clarify the clinical diagnosis and 48/60 (80%) led to altered management.ConclusionsWe demonstrate the utility of the RCPath audit templates, highlighting the clinical value of medical liver biopsies in the diagnostic work-up and management of patients with liver disease.


2021 ◽  
Vol 4 (6) ◽  
pp. 48-50
Author(s):  
Soterios George Panousopoulos ◽  
Panayiotis Lazarides ◽  
Georgios Panousis ◽  
Doukakis Paradellis ◽  
Nikolaos Boltsis ◽  
...  

Author(s):  
Melissa Richard-Greenblatt ◽  
Matthew J Ziegler ◽  
Valerie Bromberg ◽  
Elizabeth Huang ◽  
Hatem Abdallah ◽  
...  

Abstract Background The SARS-CoV-2 reverse-transcription polymerase chain reaction (RT-PCR) cycle threshold (Ct) has been used to estimate quantitative viral load, with the goal of targeting isolation precautions for individuals with COVID-19 and guiding public health interventions. However, variability in specimen quality can alter the Ct values obtained from SARS-CoV-2 clinical assays. We sought to define how variable nasopharyngeal (NP) swab quality impacts clinical SARS-CoV-2 test sensitivity. Methods We performed amplification of a human gene target (β-actin) in parallel with a clinical RT-PCR targeting the SARS-CoV-2 ORF1ab gene for 1282 NP specimens collected from patients with clinical concern for COVID-19. We evaluated the relationship between NP specimen quality, characterized by late Ct values for the human gene target β-actin Ct, and the probability of SARS-CoV-2 detection via logistic regression, as well as the linear relationship between SARS-CoV-2 and β-actin Ct. Results Low quality NP swabs are less likely to detect SARS-CoV-2 (odds ratio 0.607, 95%CI 0.487 to 0.753). We observed a positive linear relationship between SARS-CoV-2 and β-actin Ct values (slope 0.181, 95%CI 0.097 to 0.264), consistent with a reduction in detection of 0.181 cycles for each additional cycle of the β-actin target. COVID-19 disease severity was not associated with β-actin Ct values. Conclusions Variability in NP specimen quality significantly impacts the performance of clinical SARS-CoV-2 assays, and caution should be taken when interpreting quantitative SARS-CoV-2 Ct results. If unrecognized, low quality NP specimens, which are characterized by a low level of amplifiable human DNA target, may limit the successful application of SARS-CoV-2 Ct values to direct infection control and public health interventions.


Author(s):  
Sung Jin Jo ◽  
Hyo-jin Chae ◽  
Yong-Wha Lee ◽  
Jong Do Seo ◽  
Sang Hoon Song ◽  
...  

Background: The type of blood collection tube affects specimen quality and laboratory results. Because plasma specimens have a shorter processing time compared to serum specimens, emergency biochemistry tests use plasma. However, serum specimens remain stable after centrifugation and show more accurate results than plasma. Therefore, a quick-clotting serum separator tube (SST) is expected to be useful for shorter turnaround times and accurate results. We evaluated a new quick-clotting SST VQ-Tube<sup>TM</sup> (AB Medical, Korea) for clinical chemistry and thyroid hormone assays. Methods: One hundred volunteers from four university hospitals were recruited and peripheral blood samples were collected in quick-clotting SST VQ-Tubes<sup>TM</sup> and the commonly used SST V-Tubes<sup>TM</sup>. The obtained specimens were used for 16 clinical chemistry assays and three thyroid hormone assays. Results: The differences (%) in the test results obtained from the samples in each tube satisfied the allowable difference ranges (19 assays). The differences in the test results between the tubes satisfied the desired specifications for accuracy except for the glucose results (2.75%). The paired t-test revealed significant differences between the results of six assays but each set of results showed a good correlation. Samples were visually inspected for serum clarity and gel barrier integrity, and incomplete clotting reactions and hemolyzed serum were not observed. Conclusion: The new quick-clotting VQ-Tube<sup>TM</sup> demonstrated reliable test results compared to the commonly used SST V-Tube<sup>TM</sup>. This quick-clotting tube will provide fast test results with adequately separated serum specimens, especially for patients who need fast tests.


Endoscopy ◽  
2021 ◽  
Author(s):  
Mihai Ciocirlan ◽  
Anca Gheorghiu ◽  
Dana Bilous ◽  
Miruna Cruceru ◽  
Georgiana Mănăilă ◽  
...  

Background and study aims. EUS FNA is recommended for diagnosis of solid pancreatic masses. We aimed to evaluate if a high needle movement acceleration value during puncture increases diagnostic accuracy. Patients and methods. EUS FNA needle acceleration was measured using a PocketLab accelerometer connected by Bluetooth to a smartphone. Two passes (fast and slow) with higher and respectively lower than 1g needle acceleration values were performed in random order. Sample cellularity and quality were measured by semiquantitative scales. Results. 51 patients were included (32 women, mean age 63). Mean acceleration values were 1.59 ± 0.66g for fast pass and 0.32 ± 0.19g for slow pass, p < 10-3. Fast pass yielded significantly higher EUS FNA accuracy (84.3% vs. 68.6%, p = 0.021) and adequate quality scores (94.1% vs. 76.5%, p = 0.007). High cellularity score frequencies were similar (15.7% vs. 11.8%, p = 0.317). Conclusions. A higher than 1g EUS FNA needle acceleration may increase diagnostic accuracy and specimen quality of pancreatic solid lesions.


2021 ◽  
Vol 4 (Supplement_1) ◽  
pp. 119-121
Author(s):  
H Anvari ◽  
M Rai ◽  
A Hussey ◽  
D Hurlbut ◽  
A Grin ◽  
...  

Abstract Background Tissue sampling is often limited to acquisition of one to two biopsy samples during a single pass. The ability to obtain more than two biopsies during a single pass can improve diagnostic yield however is potentially limited by poor specimen quality and loss of specimens. The multibite forceps used in this study have a unique geometry with the ability to store up to six biopsy samples taken consecutively with easy removal of the samples when shaken in solution. If multiple biopsies can be taken during a single pass with preserved specimen quality then we can reduce procedure time, improve efficiency and sensitivity of biopsies. Aims To evaluate the histological quality of the first biopsy sample compared to the last (sixth) biopsy sample acquired consecutively with the multibite forcep during a single act. Methods A porcine stomach was coloured with surgical dye to create six separate segments. An experienced endoscopist used single use disposable MultiCROC multi-sampling biopsy forceps to acquire six consecutive biopsies. Biopsies were manually separated into the order of which they were acquired (biopsy one through six) and each sample was placed in formalin solution. A total of 35 sets of 6 biopsies were obtained producing a total of 210 samples. Samples were randomized and two independent pathologists who were blinded to the biopsy order assessed the histological quality of specimens. Specimens were evaluated for presence of full thickness mucosa, absence of fragmentation, crush artifact and diagnostic utility. Each pathologist then scored each specimen and the mean scores were used to compare the histological quality of the first biopsy vs. the sixth biopsy for each set. Results Our preliminary results include 12 of the 35 sets of biopsies. Using a paired sample t test, there was no significant difference between the mean score given to biopsy one and biopsy six for all twelve pairs [3.62 (SD 1.46) vs. 3.67 (SD 1.15), correlation factor=0.498 and p=.10). There was no significant difference between the first and sixth biopsy when comparing the presence of full thickness mucosa [0.59 (SD 0.49) vs. 0.59 (SD 0.44), p=.086], absence of fragmentation [0.50 (SD 0.50) vs. 0.73 (SD 0.34), p=0.06], absence of crush artifact [0.96 (SD 0.15) vs. 0.91 (SD 0.30), p=0.77), and specimen size [1.64 (SD 0.92) vs. 1.70 (SD 0.65), p=0.56). Conclusions No significant differences were found between the histological quality of the first biopsy and the sixth biopsy. Additional parameters such as specimen size, full thickness mucosa, absence of fragmentation and absence of crush artifact revealed no significant differences between the first and sixth biopsy. This preliminary data thus far shows that there is no difference between the histological quality when multiple biopsies are retrieved consecutively. Funding Agencies NoneNone


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