Hydrodynamic disturbance controls microbial community assembly and biogeochemical processes in coastal sediments

The microbial community composition and biogeochemical dynamics of coastal permeable (sand) sediments differs from cohesive (mud) sediments. Tide- and wave-driven hydrodynamic disturbance causes spatiotemporal variations in oxygen levels, which select for microbial generalists and disrupt redox cascades. In this work, we profiled microbial communities and biogeochemical dynamics in sediment profiles from three sites varying in their exposure to hydrodynamic disturbance. Strong variations in sediment geochemistry, biogeochemical activities, and microbial abundance, composition, and capabilities were observed between the sites. Most of these variations, except for microbial abundance and diversity, significantly correlated with the relative disturbance level of each sample. In line with previous findings, metabolically flexible habitat generalists (e.g., Flavobacteriaceae, Woeseaiceae, Rhodobacteraceae) dominated in all samples. However, we present evidence that aerobic specialists such as ammonia-oxidizing archaea (Nitrosopumilaceae) were more abundant and active in more disturbed samples, whereas bacteria capable of sulfate reduction (e.g., uncultured Desulfobacterales), dissimilatory nitrate reduction to ammonium (DNRA; e.g., Ignavibacteriaceae), and sulfide-dependent chemolithoautotrophy (e.g., Sulfurovaceae) were enriched and active in less disturbed samples. These findings are supported by insights from nine deeply sequenced metagenomes and 169 derived metagenome-assembled genomes. Altogether, these findings suggest that hydrodynamic disturbance is a critical factor controlling microbial community assembly and biogeochemical processes in coastal sediments. Moreover, they strengthen our understanding of the relationships between microbial composition and biogeochemical processes in these unique environments.

Contributions to a Discussion of Spinosaurus aegyptiacus as a Capable Swimmer and Deep-Water Predator

The new findings on Spinosaurus’ swim tail strongly suggest that Spinosaurus was a specialized deep-water predator. However, the tail must be seen in the context of the propelled body. The comparison of the flow characteristics of Spinosaurus with geometrically similar animals and their swimming abilities under water must take their Reynolds numbers into account and provide a common context for the properties of Spinosaurus’ tail and dorsal sail. Head shape adaptations such as the head crest reduced hydrodynamic disturbance and facilitated stealthy advance, especially when hunting without visual contact, when Spinosaurus could have used its rostral integumentary mechanoreceptors for prey detection. The muscular neck permitted ‘pivot’ feeding, where the prey’s escape abilities were overcome by rapid dorsoventral head movement, facilitated by crest-mediated lower friction.

Risks of the Vision System Lesion during a Long Space Flight

The article describes the factors of a long-term space flight associated with the risk of ocular pathology, including the established risk of space neuroocular syndrome (SANS). The mechanisms of intraocular hydrodynamic disturbance and their potential role in the development of SANS are considered. The results of the studies concerning the hydrodynamics of the eye in the conditions of simulated microgravity are presented.

Phosphorus Fractions and Release Factors in Surface Sediments of a Tailwater River in Xinmi City, a Case Study

The Shuangji River in Xinmi City is a tailwater-type river. Its main water sources are the effluent from the domestic sewage plant, the effluent from the paper industry sewage plant and the coal well. The construction of wastewater treatment facilities in Xinmi city has significantly reduced the amount of total phosphorus (TP) discharged into Shuangji River. However, phosphorus control in rivers where the overlying waters are predominantly tailwaters is still a challenge, especially as the sediment–water interface’s phosphorus exchange mechanism needs to be investigated in detail. In this study, the content and proportion of each phosphorus fraction in the sediment of a tailwater-type river, the Shuangji River, were determined. It was found that the organic phosphorus (OP) and iron-bound phosphorus (Fe-P) content and proportion were high, and the risk of release was relatively high in the section of the river where the overlying water was the tailwater of a sewage plant. Temperature, pH, dissolved oxygen, and hydraulic disturbance were also found to control phosphorus forms’ transformation and release in the sediment. Elevated temperatures mainly stimulated the release of OP and Fe-P from the sediments. The dissolution of calcium-bound phosphorus (Ca-P) is the main pathway for phosphorus release under acidic conditions, whereas, under alkaline conditions, phosphorus release is mainly controlled by ion exchange between OH− and Fe-P and metal oxide-bound phosphorus (Al-P). Aerobic versus anaerobic conditions cause changes in Fe-P content in the sediment mainly by changing Fe ions’ chemical valence. Hydrodynamic disturbance accelerates labile-P release, but once the hydrodynamic disturbance stops, the overlying water dissolved total phosphorus (DTP) concentration rapidly decreases to a similar concentration as before.

Effects of interactions between macroalgae and seagrass on the distribution of macrobenthic invertebrate communities at the Yellow River Estuary, China

<p>Algae-dominance in seagrass beds has been well recognized, however, the competitive relationship between seagrass and macroalgae along land-sea gradients and their ecological effects has received little attention. In this study, a field survey was conducted at the Yellow River Estuary to investigate the effects of macroalgal proliferation on seagrass and macrobenthic invertebrate communities. Our results suggested that strong competitive interaction existed between the two primary producers, and the positive or negative effects of macroalgae on seagrass growth varied along land-sea gradient. Furthermore, the dominant controlling factors on the biomass, density and diversity of macrobenthic invertebrate communities were found to vary accordingly, i.e., from features of the primary producers in the nearshore where macroalgae suppressed seagrass growth to hydrodynamic disturbance in the offshore where macroalgae facilitated seagrass growth. Our study emphasizes the importance to integrate interspecific competition into ecosystem-based management of seagrass ecosystem, and provides references for additional ecological indicators.</p>

Rapid soil organic carbon decomposition in river systems: effects of the aquatic microbial community and hydrodynamical disturbance

Different erosion processes deliver large amounts of terrestrial soil organic carbon (SOC) to rivers. Mounting evidence indicates that a significant fraction of this SOC, which displays a wide range of ages, is rapidly decomposed after entering the river system. The mechanisms explaining this rapid decomposition of previously stable SOC still remain unclear. In this study, we investigated the relative importance of two mechanisms that possibly control SOC decomposition rates in aquatic systems: (i) in the river water SOC is exposed to the aquatic microbial community which is able to metabolize SOC much more quickly than the soil microbial community and (ii) SOC decomposition in rivers is facilitated due to the hydrodynamic disturbance of suspended sediment particles. We performed different series of short-term (168 h) incubations quantifying the rates of SOC decomposition in an aquatic system under controlled conditions. Organic carbon decomposition was measured continuously through monitoring dissolved O2 (DO) concentration using a fiber-optic sensor (FireStingO2, PyroScience). Under both shaking and standing conditions, we found a significant difference in decomposition rate between SOC with aquatic microbial organisms added (SOC + AMO) and without aquatic microbial organisms (SOC − AMO). The presence of an aquatic microbial community enhanced the SOC decomposition process by 70 %–128 % depending on the soil type and shaking–standing conditions. While some recent studies suggested that aquatic respiration rates may have been substantially underestimated by performing measurement under stationary conditions, our results indicate that the effect of hydrodynamic disturbance is relatively minor, under the temperature conditions, for the soil type, and for the suspended matter concentration range used in our experiments. We propose a simple conceptual model explaining these contrasting results.

Vulnerability assessment of nearshore clam habitat subject to storm waves and surge

Present work studied the lesion mechanism of coastal clam and its vulnerability assessment subject to the hydrodynamic disturbance of extreme storm events. A clam habitat at the northeast coast of China was chosen for the demonstration study. Relocation failure after passive transport due to excessive substrate erosion or suffocation in anoxic burial under overburdening sedimentation was identified the major cause of negative biomass responses during the storm. Based on the biological propensity and physiological sensitivity of the clam, a tunable loss probability function correlating the mortality with the shell length and the seabed change was proposed. A hydrodynamic model was then adopted to compute the sediment transport and net changes in the seafloor in response to the comprehensive process of storm waves and surge. The spatial distribution of the damage states was evaluated based on the numerical results incorporating the loss probability function. The estimated damage was mainly concentrated along the wave shoaling and breaking belts parallel to the shoreline. High surge levels pushed the “damage belt” shoreward, in which case large waves were able to propagate close to the shoreline before breaking. The scientific findings are helpful to better understand the vulnerability of the clam habitat to the storm disturbance. The study result as well provides a practical methodology of the storm risk assessment for benthic communities in broader ecological and geophysical scopes. The methodology are expected to be further validated and improved by more widespread sampling on coastal ecosystem or mariculture that will withstand future storms.