paraphyletic group
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2022 ◽  
Vol 787 ◽  
Author(s):  
Márcia Rapoza ◽  
Cecilia Waichert

Ageniella Banks, 1912 is a paraphyletic group exclusive to the Nearctic and Neotropical regions. The genus has a remarkable morphological diversity among species and strong sexual dimorphism, hampering taxonomic studies of it. Herein, we add two new species to the Neotropical fauna of Ageniella: A. caerulea sp. nov. belonging to the subgenus Ameragenia and A. ruschi sp. nov. belonging to the subgenus Priophanes; both species are described and illustrated. A brief discussion of subgeneric characters and an updated taxonomic key to the species of Ageniella known from Brazil are provided.


Author(s):  
Abhishek Mishra ◽  
Anja Forche ◽  
Matthew Z. Anderson

While most fungi have the ability to reproduce sexually, multiple independent lineages have lost meiosis and developed parasexual cycles in its place. Emergence of parasexual cycles is particularly prominent in medically relevant fungi from the CUG paraphyletic group of Candida species. Since the discovery of parasex in C. albicans roughly two decades ago, it has served as the model for Candida species. Importantly, parasex in C. albicans retains hallmarks of meiosis including genetic recombination and chromosome segregation, making it a potential driver of genetic diversity. Furthermore, key meiotic genes play similar roles in C. albicans parasex and highlights parallels between these processes. Yet, the evolutionary role of parasex in Candida adaptation and the extent of resulting genotypic and phenotypic diversity remain as key knowledge gaps in this facultative reproductive program. Here, we present our current understanding of parasex, the mechanisms governing its regulation, and its relevance to Candida biology.


Marine Drugs ◽  
2021 ◽  
Vol 19 (12) ◽  
pp. 660
Author(s):  
Andrey B. Imbs ◽  
Ekaterina V. Ermolenko ◽  
Valeria P. Grigorchuk ◽  
Tatiana V. Sikorskaya ◽  
Peter V. Velansky

Marine invertebrates are a paraphyletic group that comprises more than 90% of all marine animal species. Lipids form the structural basis of cell membranes, are utilized as an energy reserve by all marine invertebrates, and are, therefore, considered important indicators of their ecology and biochemistry. The nutritional value of commercial invertebrates directly depends on their lipid composition. The lipid classes and fatty acids of marine invertebrates have been studied in detail, but data on their lipidomes (the profiles of all lipid molecules) remain very limited. To date, lipidomes or their parts are known only for a few species of mollusks, coral polyps, ascidians, jellyfish, sea anemones, sponges, sea stars, sea urchins, sea cucumbers, crabs, copepods, shrimp, and squid. This paper reviews various features of the lipid molecular species of these animals. The results of the application of the lipidomic approach in ecology, embryology, physiology, lipid biosynthesis, and in studies on the nutritional value of marine invertebrates are also discussed. The possible applications of lipidomics in the study of marine invertebrates are considered.


2021 ◽  
Vol 51 (4) ◽  
Author(s):  
Boris I. Sirenko ◽  
Julia D. Sigwart

AbstractThe genus Leptochiton Gray, 1847 is a paraphyletic group of small, pale, and usually deepwater chitons. They lack some of the morphological shell characters that are important in the systematics of Polyplacophora, and species identification within this genus is challenging. One species complex in the North Pacific includes at least 11 species that were historically synonymized or confused with Leptochiton rugatus (Carpenter in Pilsbry, 1892). Scrutiny of ecological and biogeographical patterns has helped to separate species lineages within this clade and support morphological diagnoses. Based on morphological and molecular studies, a new species is described that was previously confused with both Leptochiton assimilis (Thiele, 1909) and Leptochiton rugatus. This new species is widely distributed in the summer-warmed bays of the southern Primorye, Moneron Island, Northern Japan, Kunashir, and the Yellow Sea. This species is at least ~8% different in the COI barcode region from Leptochiton rugatus s.s. Morphological differences between the new species and closely related species are presented.


2021 ◽  
Vol 13 (7) ◽  
pp. 18792-18799
Author(s):  
Izneil Nashriq ◽  
Indraneil Das

The paraphyletic group of Old World rock gecko genus Cnemaspis, currently comprises ~180 described species from Africa and Asia.  The south-east Asian clade with 63 described species, is most diverse on the Thai-Malay Peninsula, with just five species known from Borneo, an island biodiversity hotspot.  Karst regions are known as centres for species endemism, and vast areas of caves and karst exist across northern Borneo.  Fieldwork from 2017 to 2020 recovered additional undescribed species of Cnemaspis from areas of karst forests in western and northern Sarawak.  These discoveries emphasize the importance of preserving areas of limestone karst within rainforest areas for maintaining species diversity, as well as accelerating research on documenting the biota.


2021 ◽  
Author(s):  
Artem Nikolayevich Bondaryuk ◽  
Evgeny Ivanovich Andaev ◽  
Yurij Pavlovich Dzhioev ◽  
Vladimir Igorevich Zlobin ◽  
Sergey Evgenyevich Tkachev ◽  
...  

The tick-borne flavivirus (TBFV) group contains at least 12 members where five of them are important pathogens of humans inducing diseases with varying severity (from mild fever forms to acute encephalitis). The taxonomy structure of TBFV is not fully clarified at present. In particular, there is a number of paraphyletic issues of tick-borne encephalitis virus (TBEV) and louping-ill virus (LIV). In this study, we aimed to apply different bioinformatic approaches to analyze all available complete genome amino acid sequences to delineate TBFV members at the species level. Results showed that the European subtype of TBEV (TBEV-E) is a distinct species unit. LIV, in turn, should be separated into two species. Additional analysis of the diversity of TBEV and LIV antigenic determinants also demonstrate that TBEV-E and LIV are significantly different from other TBEV subtypes. The analysis of available literature provided data on other virus phenotypic particularities that supported our hypothesis. So, within the TBEV+LIV paraphyletic group, we offer to assign four species to get a more accurate understanding of the TBFV interspecies structure according to the modern monophyletic conception.


2021 ◽  
Vol 17 (1) ◽  
Author(s):  
Moacyr Xavier Gomes da Silva ◽  
Franciany Braga-Pereira ◽  
Mikaela Clotilde da Silva ◽  
José Valberto de Oliveira ◽  
Sérgio de Faria Lopes ◽  
...  

Abstract Background Reptiles form a paraphyletic group with significant roles for human society, including species that are considered important for food, medicinal and mystical use and as pets. Some species are considered to be aversive, whereas others are captivating among people. Aversion is an important factor which should be considered in the conservation policies of these animals. As such, here, we investigate the demographic, educational, perceptives and behavioural factors of students related to their aversion and non-conservationist attitudes directed towards different reptile species and evaluated the effect of educational exhibition of animals as a strategy of mitigating these attitudes. Methods The data were obtained through forms on the aversion and conservation of reptiles represented by three species, a chelonian, a snake and a lizard. The form was given in two instances, before and after a visit to a private zoo (Museu Vivo Répteis da Caatinga), where the students had contact with the aforementioned species. A total of 133 students participated in the study, among these, 43 from elementary school (21 females and 22 males), 29 from high school (16 females and 13 males), 37 from university biology students (22 females and 15 males) and 24 university mathematics students (6 females and 18 males). Results Among all evaluated species, snakes were considered to be the most aversive species. The aversion attitudes differed between the three evaluated species when correlated to age and type of university courses. However, this pattern did not differ between student sexes. Older students had a lower aversion to the chelonian compared to the younger ones, but for snakes and lizards, the aversion was high among students of all ages. The university biology students had a lower aversion compared to the university mathematics students for the three species. The recognition and handle of the tested species and previous visits to educational exhibitions of animals were negatively related to aversion. The comparative analysis of the forms applied before and after the visit to the Museu Vivo Répteis da Caatinga showed that this visit influenced the decrease of aversion, but not in non-conservationist attitudes, for which the attitude scores had always been low. Conclusions We conclude that reptile aversion varies in accordance with the taxon, being snakes the most disliked by students. The visit to the educational exhibition of animals contributed to the reduction of the observed aversion. This is especially true when the acquisition of educational information about species is associated with practical activities which includes contact with the animals. Finally, the fact that non-conservationist attitudes had been low towards all species perhaps demonstrates a conservationist tendency even for the most aversive species.


2021 ◽  
Author(s):  
Danaraj Jeyapragash ◽  
Ayyappan Saravanakumar ◽  
Mariasingarayan Yosuva

Metabolomics is one of the new field of “Omics” approach and the youngest triad of system biology, which provides a broad prospective of how metabolic networks are controlled and indeed emerged as a complementary tool to functional genomics with well-established technologies for genomics, transcriptomics and proteomics. Though, metabolite profiling has been carried out for decades, owing to decisive mechanism of a molecule regulation, the importance of some metabolites in human regimen and their use as diagnostic markers is now being recognized. Plant metabolomics therefore aims to highlight the characterization of metabolite pool of a plant tissue in response to its environment. Seagrassses, a paraphyletic group of marine hydrophilous angiosperms which evolved three to four times from land plants back to the sea. Seagrasses share a number of analogous acquired metabolic adaptations owing to their convergent evolution, but their secondary metabolism varied among the four families that can be considered as true seagrasses. From a chemotaxonomic point of view, numerous specialized metabolites have often been studied in seagrasses. Hence, this chapter focus the metabolome of seagrasses in order to explore their bioactive properties and the recent advancements adopted in analytical technology platforms to study the non-targeted metabolomics of seagrasses using OMICS approach.


PeerJ ◽  
2021 ◽  
Vol 9 ◽  
pp. e11086
Author(s):  
Xianyi Wang ◽  
Jiajia Wang ◽  
Ren-Huai Dai

Similar morphological characteristics and limited molecular data of Olidiana resulted in their unknown phylogenetic statuses and equivocal relationships. To further understand the genus Olidiana, we sequenced and annotated five Olidiana complete mitochondrial genomes (mitogenomes). Our results show that Olidiana mitogenomes range from 15,205 bp to 15,993 bp in length and include 37 typical genes (13 protein-coding genes, 22 tRNAs, and 2 rRNAs) and a control region. Their nucleotide composition, codon usage, features of control region, and tRNA secondary structures are similar to other members of Cicadellidae. We constructed the phylogenetic tree of Cicadellidae using the maximum likelihood (ML) and Bayesian inference (BI) methods based on all valid mitogenome sequences. The most topological structure of the obtained phylogenetic tree is consistent. Our results support the monophyletic relationships among 10 subfamilies within Cicadellidae and confirm Iassinae and Coelidiinae to be sister groups with high approval ratings. Interestingly, Olidiana was inferred as a paraphyletic group with strong support via both ML and BI analyses. These complete mitogenomes of five Olidiana species could be useful in further studies for species diagnosis, evolution, and phylogeny research within Cicadellidae.


ZooKeys ◽  
2021 ◽  
Vol 1015 ◽  
pp. 145-167
Author(s):  
Roberto Leonan M. Novaes ◽  
Vinícius C. Cláudio ◽  
Roxanne J. Larsen ◽  
Don E. Wilson ◽  
Marcelo Weksler ◽  
...  

Myotis nesopolus currently comprises two subspecies. The nominate subspecies (M. n. nesopolus) occurs on the Caribbean islands of Curaçao and Bonaire, Netherlands Antilles, whereas M. n. larensis is known from mainland South America in northeastern Colombia and northwestern Venezuela. Our Maximum Likelihood phylogenetic analyses of cytochrome-b gene sequences recovered M. nesopolus as a paraphyletic group, with M. n. nesopolus and M. n. larensis as non-sister lineages. The haplotype network indicates that these two subspecies do not share any haplotypes and are in different evolutionary trajectories. Additionally, these two subspecies can be distinguished on the basis of qualitative and quantitative morphological traits. This pattern supports the recognition of M. nesopolus and M. larensis as full species. Our results also reveal that the assemblage of Caribbean Myotis do not form a monophyletic group. Caribbean species are phylogenetically close to mainland species from northern South America and Central America, suggesting that colonization of Caribbean islands happened multiple times.


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