Isolation of a degrading strain of Fusarium verticillioides and bioremediation of glyphosate residue

Abstract Background Apple replant disease (ARD) has been reported from all major fruit-growing regions of the world, and is often caused by biotic factors (pathogen fungi) and abiotic factors (phenolic compounds). In order to clarify the proteomic differences of Fusarium moniliforme under the action of phloridzin, and to explore the potential mechanism of F. moniliforme as the pathogen of ARD, the role of Fusarium spp. in ARD was further clarified. Methods In this paper, the quantitative proteomics method iTRAQ analysis technology was used to analyze the proteomic differences of F. moniliforme before and after phloridzin treatment. The differentially expressed protein was validated by qRT-PCR analysis. Results A total of 4535 proteins were detected, and 293 proteins were found with more than 1.2 times (P< 0.05) differences. In-depth data analysis revealed that 59 proteins were found with more than 1.5 times (P< 0.05) differences, and most proteins were consistent with the result of qRT-PCR. Differentially expressed proteins were influenced a variety of cellular processes, particularly metabolic processes. Among these metabolic pathways, a total of 8 significantly enriched KEGG pathways were identified with at least 2 affiliated proteins with different abundance in conidia and mycelium. Functional pathway analysis indicated that up-regulated proteins were mainly distributed in amino sugar, nucleotide sugar metabolism, glycolysis/ gluconeogenesis and phagosome pathways. Conclusions This study is the first to perform quantitative proteomic investigation by iTRAQ labeling and LC-MS/MS to identify differentially expressed proteins in F. moniliforme under phloridzin conditions. The results confirmed that F. moniliforme presented a unique protein profile that indicated the adaptive mechanisms of this species to phloridzin environments. The results deepened our understanding of the proteome in F. moniliforme in response to phloridzin inducers and provide a basis for further exploration for improving the efficiency of the fungi as biocontrol agents to control ARD.

Download Full-text

The Effect of Fusarium verticillioides Fumonisins on Fatty Acids, Sphingolipids, and Oxylipins in Maize Germlings

International Journal of Molecular Sciences ◽

10.3390/ijms22052435 ◽

2021 ◽

Vol 22 (5) ◽

pp. 2435

Author(s):

Marzia Beccaccioli ◽

Manuel Salustri ◽

Valeria Scala ◽

Matteo Ludovici ◽

Andrea Cacciotti ◽

...

Keyword(s):

Fatty Acids ◽

Fusarium Verticillioides ◽

Fungal Growth ◽

Defense Responses ◽

Ceramide Synthase ◽

Ear Rot ◽

In Planta ◽

Disease Symptoms ◽

The Impact

Fusarium verticillioides causes multiple diseases of Zea mays (maize) including ear and seedling rots, contaminates seeds and seed products worldwide with toxic chemicals called fumonisins. The role of fumonisins in disease is unclear because, although they are not required for ear rot, they are required for seedling diseases. Disease symptoms may be due to the ability of fumonisins to inhibit ceramide synthase activity, the expected cause of lipids (fatty acids, oxylipins, and sphingolipids) alteration in infected plants. In this study, we explored the impact of fumonisins on fatty acid, oxylipin, and sphingolipid levels in planta and how these changes affect F. verticillioides growth in maize. The identity and levels of principal fatty acids, oxylipins, and over 50 sphingolipids were evaluated by chromatography followed by mass spectrometry in maize infected with an F. verticillioides fumonisin-producing wild-type strain and a fumonisin-deficient mutant, after different periods of growth. Plant hormones associated with defense responses, i.e., salicylic and jasmonic acid, were also evaluated. We suggest that fumonisins produced by F. verticillioides alter maize lipid metabolism, which help switch fungal growth from a relatively harmless endophyte to a destructive necrotroph.

Download Full-text

Transcriptomics differentiate two novel bioactive strains of Paenibacillus sp. isolated from the perennial ryegrass seed microbiome

Scientific Reports ◽

10.1038/s41598-021-94820-2 ◽

2021 ◽

Vol 11 (1) ◽

Author(s):

Tongda Li ◽

Ross Mann ◽

Jatinder Kaur ◽

German Spangenberg ◽

Timothy Sawbridge

Keyword(s):

Nitrogen Fixation ◽

Secondary Metabolite ◽

Perennial Ryegrass ◽

Fusarium Verticillioides ◽

In Vitro Assays ◽

Colletotrichum Graminicola ◽

Nitrogen Fixation Activity ◽

Auxin Production ◽

Paenibacillus Sp

AbstractPaenibacillus species are Gram-positive bacteria that have been isolated from a diverse array of plant species and soils, with some species exhibiting plant growth-promoting (PGP) activities. Here we report two strains (S02 and S25) of a novel Paenibacillus sp. that were isolated from perennial ryegrass (Lolium perenne) seeds. Comparative genomics analyses showed this novel species was closely related to P. polymyxa. Genomic analyses revealed that strains S02 and S25 possess PGP genes associated with biological nitrogen fixation, phosphate solubilisation and assimilation, as well as auxin production and transportation. Moreover, secondary metabolite gene cluster analyses identified 13 clusters that are shared by both strains and three clusters unique to S25. In vitro assays demonstrated strong bioprotection activity against phytopathogens (Colletotrichum graminicola and Fusarium verticillioides), particularly for strain S02. A transcriptomics analysis evaluating nitrogen fixation activity showed both strains carry an expressed nif operon, but strain S02 was more active than strain S25 in nitrogen-free media. Another transcriptomics analysis evaluating the interaction of strains with F. verticillioides showed strain S02 had increased expression of core genes of secondary metabolite clusters (fusaricidin, paenilan, tridecaptin and polymyxin) when F. verticillioides was present and absent, compared to S25. Such bioactivities make strain S02 a promising candidate to be developed as a combined biofertiliser/bioprotectant.

Download Full-text

A Fumonisin Prevention Tool for Targeting and Ranking Agroclimatic Conditions Favoring Exposure in French Maize-Growing Areas

Toxins ◽

10.3390/toxins13030214 ◽

2021 ◽

Vol 13 (3) ◽

pp. 214

Author(s):

Agathe Roucou ◽

Christophe Bergez ◽

Benoît Méléard ◽

Béatrice Orlando

Keyword(s):

Mixed Model ◽

Linear Mixed Model ◽

Fusarium Verticillioides ◽

Agricultural Practices ◽

Climatic Conditions ◽

Agricultural Cooperatives ◽

Mixed Model Approach ◽

Food And Feed ◽

Model Approach

The levels of fumonisins (FUMO)—mycotoxins produced by Fusarium verticillioides—in maize for food and feed are subject to European Union regulations. Compliance with the regulations requires the targeting of, among others, the agroclimatic factors influencing fungal contamination and FUMO production. Arvalis-Institut du végétal has created a national, multiyear database for maize, based on field survey data collected since 2003. This database contains information about agricultural practices, climatic conditions and FUMO concentrations at harvest for 738 maize fields distributed throughout French maize-growing regions. A linear mixed model approach highlights the presence of borers and the use of a late variety, high temperatures in July and October, and a water deficit during the maize cycle as creating conditions favoring maize contamination with Fusarium verticillioides. It is thus possible to target a combination of risk factors, consisting of this climatic sequence associated with agricultural practices of interest. The effects of the various possible agroclimatic combinations can be compared, grouped and classified as promoting very low to high FUMO concentrations, possibly exceeding the regulatory threshold. These findings should facilitate the creation of a national, informative and easy-to-use prevention tool for producers and agricultural cooperatives to manage the sanitary quality of their harvest.

Download Full-text

Antifungal and antimycotoxigenic effects of Zingiber officinale, Cinnamomum zeylanicum and Cymbopogon martinii essential oils against Fusarium verticillioides

Food Additives & Contaminants Part A ◽

10.1080/19440049.2020.1778183 ◽

2020 ◽

pp. 1-11

Author(s):

Juliana Cristina Castro ◽

Giseli Cristina Pante ◽

Bruno Martins Centenaro ◽

Rafaela Takako Ribeiro De Almeida ◽

Eduardo Jorge Pilau ◽

...

Keyword(s):

Essential Oils ◽

Fusarium Verticillioides ◽

Zingiber Officinale ◽

Cinnamomum Zeylanicum ◽

Cymbopogon Martinii

Download Full-text

A Genome-Wide Association Study To Understand the Effect of Fusarium verticillioides Infection on Seedlings of a Maize Diversity Panel

G3 Genes|Genome|Genetics ◽

10.1534/g3.119.400987 ◽

2020 ◽

Vol 10 (5) ◽

pp. 1685-1696

Author(s):

Lorenzo Stagnati ◽

Vahid Rahjoo ◽

Luis F. Samayoa ◽

James B. Holland ◽

Virginia M. G. Borrelli ◽

...

Keyword(s):

Association Study ◽

Genome Wide Association Study ◽

Germination Rate ◽

Fusarium Verticillioides ◽

Screening Method ◽

Significant Snps ◽

Genome Wide Association ◽

Genome Wide ◽

Seedling Length ◽

A Genome

Fusarium verticillioides, which causes ear, kernel and stem rots, has been reported as the most prevalent species on maize worldwide. Kernel infection by F. verticillioides results in reduced seed yield and quality as well as fumonisin contamination, and may affect seedling traits like germination rate, entire plant seedling length and weight. Maize resistance to Fusarium is a quantitative and complex trait controlled by numerous genes with small effects. In the present work, a Genome Wide Association Study (GWAS) of traits related to Fusarium seedling rot was carried out in 230 lines of a maize association population using 226,446 SNP markers. Phenotypes were scored on artificially infected kernels applying the rolled towel assay screening method and three traits related to disease response were measured in inoculated and not-inoculated seedlings: plant seedling length (PL), plant seedling weight (PW) and germination rate (GERM). Overall, GWAS resulted in 42 SNPs significantly associated with the examined traits. Two and eleven SNPs were associated with PL in inoculated and not-inoculated samples, respectively. Additionally, six and one SNPs were associated with PW and GERM traits in not-inoculated kernels, and further nine and thirteen SNPs were associated to the same traits in inoculated kernels. Five genes containing the significant SNPs or physically closed to them were proposed for Fusarium resistance, and 18 out of 25 genes containing or adjacent to significant SNPs identified by GWAS in the current research co-localized within QTL regions previously reported for resistance to Fusarium seed rot, Fusarium ear rot and fumonisin accumulation. Furthermore, linkage disequilibrium analysis revealed an additional gene not directly observed by GWAS analysis. These findings could aid to better understand the complex interaction between maize and F. verticillioides.

Download Full-text

Systemic Infection by Fusarium verticillioides in Maize Plants Grown Under Three Temperature Regimes

Plant Disease ◽

10.1094/pdis-92-12-1695 ◽

2008 ◽

Vol 92 (12) ◽

pp. 1695-1700 ◽

Cited By ~ 36

Author(s):

A. Murillo-Williams ◽

G. P. Munkvold

Keyword(s):

High Temperature ◽

Environmental Factors ◽

Fusarium Verticillioides ◽

Systemic Infection ◽

Temperature Treatment ◽

High Temperature Treatment ◽

Kernel Infection ◽

Temperature Regimes ◽

Maize Plants ◽

Systemic Development

Fusarium verticillioides causes seedling decay, stalk rot, ear rot, and mycotoxin contamination (primarily fumonisins) in maize. Systemic infection of maize plants by F. verticillioides can lead to kernel infection, but the frequency of this phenomenon has varied widely among experiments. Variation in the incidence of systemic infection has been attributed to environmental factors. In order to better understand the influence of environment, we investigated the effect of temperature on systemic development of F. verticillioides during vegetative and reproductive stages of plant development. Maize seeds were inoculated with a green fluorescent protein-expressing strain of F. verticillioides, and grown in growth chambers under three different temperature regimes. In the vegetative-stage and reproductive-stage experiments, plants were evaluated at tasseling (VT stage), and at physiological maturity (R6 stage), respectively. Independently of the temperature treatment, F. verticillioides was reisolated from nearly 100% of belowground plant tissues. Frequency of reisolation of the inoculated strain declined acropetally in aboveground internodes at all temperature regimes. At VT, the high-temperature treatment had the highest systemic development of F. verticillioides in aboveground tissues. At R6, incidence of systemic infection was greater at both the high- and low-temperature regimes than at the average-temperature regime. F. verticillioides was isolated from higher internodes in plants at R6, compared to stage VT. The seed-inoculated strain was recovered from kernels of mature plants, although incidence of kernel infection did not differ significantly among treatments. During the vegetative growth stages, temperature had a significant effect on systemic development of F. verticillioides in stalks. At R6, the fungus reached higher internodes in the high-temperature treatment, but temperature did not have an effect on the incidence of kernels (either symptomatic or asymptomatic) or ear peduncles infected with the inoculated strain. These results support the role of high temperatures in promoting systemic infection of maize by F. verticillioides, but plant-to-seed transmission may be limited by other environmental factors that interact with temperature during the reproductive stages.

Download Full-text

Influence of Flower Thrips on Fusarium Hardlock Severity

Plant Disease ◽

10.1094/pdis-91-11-1423 ◽

2007 ◽

Vol 91 (11) ◽

pp. 1423-1429 ◽

Cited By ~ 10

Author(s):

D. J. Mailhot ◽

J. J. Marois ◽

D. L. Wright

Keyword(s):

Gossypium Hirsutum ◽

Untreated Control ◽

Yield Loss ◽

Fusarium Verticillioides ◽

Field Conditions ◽

Control Group ◽

Flower Thrips ◽

The Impact ◽

Field Plots

Cotton (Gossypium hirsutum) fiber is sometimes affected by hardlock, which is characterized by a failure of the fiber to expand outward from the boll at maturity. Because affected fiber is inaccessible to mechanical harvesters, yield loss can be considerable. Hardlock has been linked to infection by Fusarium verticillioides. The involvement of flower thrips (Frankliniella spp.), which are commonly found in cotton flowers, was explored. At 1100 h, approximately 10% of cotton flowers contained thrips that were carrying F. verticillioides. The effect of thrips and/or Fusarium in flowers and bolls was explored under greenhouse conditions. Exposing flowers to Fusarium and thrips resulted in bolls with the most severe symptoms. Exposure to either Fusarium or thrips alone resulted in more hardlock than was noted in the control group. The impact of thrips was also evaluated under field conditions. Field plots were treated with insecticides, a fungicide, both, or left untreated. Insecticides reduced thrips numbers and reduced hardlock severity. The fungicide had no impact on thrips numbers and was less effective at reducing hardlock. Combining insecticide and fungicide applications was no more effective than using insecticides alone, although it more frequently increased yield. The untreated control plots generally had the most severe hardlock and lowest yields. Reducing hardlock severity resulted in higher yields, although not consistently. These studies suggest that thrips increase the severity of hardlock, and reducing their numbers may diminish hardlock severity.

Download Full-text