scholarly journals Group B rotaviruses similar to strain CAL-1, have been circulating in Western India since 1993

2004 ◽  
Vol 132 (4) ◽  
pp. 745-749 ◽  
Author(s):  
S. D. KELKAR ◽  
J. K. ZADE
Keyword(s):  
Severe Disease ◽  
Polyacrylamide Gel Electrophoresis ◽  
Epidemiological Studies ◽  
Western India ◽  
Human Group ◽  
Older Children ◽  
Pcr Products ◽  
Group A Rotaviruses ◽  
Group A ◽  
Group B

Generally, group A rotaviruses are the most common cause of paediatric diarrhoea. However, group B rotavirus, adult diarrhoea rotavirus (ADRV), was found to be involved in epidemics of severe gastroenteritis in several areas of China during 1982–1983 and had resulted in more than one million cases among adults as well as older children. Human group B rotavirus has been rarely reported outside China, but has been detected first from five adults with diarrhoea in Kolkata, India during 1997–1998 (strain CAL-1). During epidemiological studies at the National Institute of Virology (NIV) on hospitalized diarrhoea patients at Pune, India, faecal specimens from patients of >5 years age, which were negative for group A rotavirus by ELISA were tested by polyacrylamide gel electrophoresis (PAGE). We detected rotavirus RNA migration patterns similar to that of group B rotavirus in three faecal specimens from adults, two from the specimens collected in 1993 and one in 1998 from sporadic diarrhoea cases. RT–PCR was carried out using primers derived from gene 8 which codes for the NS2 protein, followed by nested PCR, which confirmed the presence of group B rotavirus in all three specimens. The sequences of the PCR products of NIV specimens were compared with that of CAL-1, ADRV and IDIR (infectious diarrhoea of infant rat) belonging to group B rotaviruses. The sequence analysis of the PCR products showed the highest identity with CAL-1, which was reported from Kolkata, India during 1997–1998. The finding suggests that human group B rotaviruses have been circulating in Pune, India, since 1993. This emerging virus may lead to more severe disease among adults in India. There is a need for surveillance of group B rotavirus infections, especially in adult diarrhoea cases and seroepidemiological studies on group B rotavirus are required among humans and animals of Western Maharashtra, India.

scholarly journals Detection of nongroup A rotaviruses in faecal samples of pigs in the Czech Republic

2009 ◽  
Vol 54 (No. 1) ◽  
pp. 12-18 ◽  
Author(s):  
R. Smitalova ◽  
L. Rodak ◽  
B. Smid ◽  
I. Psikal
Keyword(s):  
Nucleotide Sequence ◽  
Nucleotide Sequence Identity ◽  
Sequence Identity ◽  
Faecal Samples ◽  
Two Samples ◽  
Pcr Products ◽  
Group A Rotaviruses ◽  
Group A ◽  
Cowden Strain ◽  
Group B

Besides group A rotaviruses, group B and C rotaviruses have been detected as the cause of diarrheal diseases in pigs. Of a set of 329 faecal samples from pigs, 16 samples were selected in which rotavirus was detected by electron microscopy and at the same time group A rotavirus was excluded by ELISA method. Rotaviruses were assayed using specific primers for detection of group B and C rotaviruses, and RT-PCR and semi-nested PCR methods. In one sample, no rotavirus of group B or C was detected; in the remaining 15 samples rotavirus group C was detected, in two samples together with group B rotavirus. Sequencing of the obtained PCR products and comparison with corresponding gene sequences revealed 80% nucleotide sequence identity between group B rotaviruses and available sequences of porcine isolates. A nucleotide sequence identity of 92% was obtained in group C rotaviruses as compared with the Cowden strain.

Rotavirus electropherotypes in Malaysian children

1992 ◽  
Vol 38 (9) ◽  
pp. 996-999 ◽  
Author(s):  
K. L. Yap ◽  
Y. H. Wong ◽  
C. M. Khor ◽  
Y. E. Ooi
Keyword(s):  
Molecular Epidemiology ◽  
Gel Electrophoresis ◽  
Polyacrylamide Gel Electrophoresis ◽  
Older Children ◽  
Migration Patterns ◽  
Faecal Samples ◽  
Group A Rotaviruses ◽  
Group A ◽  
Short Pattern ◽  
Predominant Strain

A 12-month study was carried out on the molecular epidemiology of rotavirus in urban and suburban Malaysian children. Analysis of faecal samples from 973 hospitalized diarrhoeic children by polyacrylamide gel electrophoresis detected 268 rotaviruses (28%). All isolates were group A rotaviruses, which produced 22 electropherotypes: 16 (91.5%) with long RNA migration patterns and 6 (8.5%) with short patterns. One of the long-pattern electropherotypes was the predominant strain (71.1% of the total electropherotypes) isolated during this study. Although 3 other strains were detected sporadically over the study period, 16 others were present only during the first 7 months and 2 others were confined to the last 5 months. Long- and short-pattern electropherotypes were found to co-circulate extensively. There was a significant association of short-pattern electropherotypes with infection in older children. In addition, the prevalence of vomiting and mean duration of diarrhoea were significantly associated with different electropherotypes. Key words: rotavirus electropherotypes.

scholarly journals Electropherotypes and G-Types of Group A Rotaviruses Detected in Children with Diarrhea in Lagos, Nigeria

ISRN Virology ◽  
2013 ◽  
Vol 2013 ◽  
pp. 1-5 ◽  
Author(s):  
Christianah Idowu Ayolabi ◽  
David Ajiboye Ojo ◽  
George Enyimah Armah
Keyword(s):  
Gel Electrophoresis ◽  
Polyacrylamide Gel Electrophoresis ◽  
Migration Pattern ◽  
Genomic Diversity ◽  
Rt Pcr ◽  
Group A Rotaviruses ◽  
Group A ◽  
Stool Samples ◽  
Health Care Centers ◽  
Virus Isolates

Approximately over 500,000 children die annually due to severe dehydrating diarrhea caused by rotaviruses. This work investigated rotavirus infection among children less than 5 years with diarrhea in Lagos and determined the circulating electropherotypes and genotypes of the virus isolates. Three hundred and two (n=302) stool samples from children below 60 months were collected from different hospitals and health care centers in Lagos and subjected to enzyme immunoassay (EIA) to determine the presence of Group A rotavirus, RT-PCR to determine the G-types, and polyacrylamide gel electrophoresis (PAGE) to determine the electropherotypes. The results show that 60.3% of the samples showed distinct rotavirus RNA migration pattern, having long electropherotypes (55.3%) of seven variations dominating over the short electropherotypes (44.5%). Six different G-types were detected (G1, G2, G3, G4, G9, and G12). Serotypes G1 and G12 showed long electropherotypic pattern while G2, G3, and G9 exhibited either short or long electropherotype. All G4 detected show short electropherotypic pattern. In conclusion, information on the genomic diversity and RNA electropherotypes of rotaviruses detected in children with diarrhea in Lagos is reported in this study.

scholarly journals Elevation of plasma fibrinogen in silent myocardial ischaemia.

1999 ◽  
Vol 46 (4) ◽  
pp. 985-989
Author(s):  
A Grzywacz ◽  
P Psuja ◽  
M Zozulińska ◽  
W Elikowski ◽  
K Zawilska
Keyword(s):  
Myocardial Ischaemia ◽  
Severe Disease ◽  
Stable Condition ◽  
Plasma Fibrinogen ◽  
Fibrinogen Concentration ◽  
Activity Levels ◽  
Silent Myocardial Ischaemia ◽  
Group A ◽  
Group B ◽  
Pai 1

High plasma levels of fibrinogen and plasminogen activator inhibitor (PAI-1) are reported to be correlated with coronary heart disease. Therefore the level of fibrinogen concentration in plasma was examined and verified for the possible correlation with the previously explored PAI-1 antigen and PAI-1 activity in the pathogenesis of premature atherosclerosis (Grzywacz et al., 1998, Blood Coagul Fibrinol. 9, 245-249). Examination included only men, aged 33-46 years, who were in a stable condition for at least six months after the acute event. They were divided into two subgroups: group A (n = 14) with and group B (n = 15) without ischaemic changes in 24 h Holter electrocardiogram. The number of involved vessels visible on the coronarography picture was similar in both groups. In the patients of group A the mean level of fibrinogen (3.92 vs 3.23 g/l, P < 0.05) was higher than in the controls (n = 15). No statistically differences were found between group B and control healthy subjects in any of the parameters measured. There were no correlation between fibrinogen concentration and PAI-1 antigen and activity levels, which were elevated in both groups of patients according to our previous study. Our results indicate that elevated levels of plasma fibrinogen and PAI-1 appeared in the group of patients with more severe disease, as revealed by silent myocardial ischaemia.

scholarly journals Survey of Human Group C Rotaviruses in Japan during the Winter of 1992 to 1993

1998 ◽  
Vol 36 (1) ◽  
pp. 6-10 ◽  
Author(s):  
Mitsutaka Kuzuya ◽  
Ritsushi Fujii ◽  
Masako Hamano ◽  
Masao Yamada ◽  
Kuniko Shinozaki ◽  
...  
Keyword(s):  
Large Scale ◽  
Blot Hybridization ◽  
Human Group ◽  
Dot Blot ◽  
Passive Hemagglutination ◽  
Group A Rotaviruses ◽  
Group A ◽  
Outer Capsid ◽  
Very High ◽  
Vp7 Gene

Fecal specimens from patients with acute diarrhea were collected from 10 prefectures in Japan over a 6-month period (November 1992 to April 1993), and the specimens that were negative for human group A rotaviruses were screened for the presence of human group C rotaviruses (CHRVs) by the reverse passive hemagglutination test. Of 784 specimens examined, 53 samples (6.8%) that were collected in 7 of 10 prefectures were positive for CHRV, indicating that CHRVs are widely distributed across Japan. Most of the CHRV isolates were detected in March and April, and CHRVs mainly prevailed in children ages 3 to 8 years. The genome electropherotypes of eight strains isolated in five individual prefectures were surprisingly similar to each other and were different from those of CHRV strains isolated to date. The outer capsid glycoprotein (VP7) gene homologies of the isolates retrieved in 1993 were subsequently analyzed by the dot blot hybridization method. As a result, the VP7 genes of the isolates revealed very high levels of homology not only with each other but also with the VP7 gene of the OK118 strain isolated in 1988. These results suggest that a large-scale outbreak of CHRV occurred during the winter of 1992 and 1993 in Japan.

scholarly journals Genotypic determination of human group A rotaviruses from Goa and Meghalaya states, India

Heliyon ◽  
2020 ◽  
Vol 6 (8) ◽  
pp. e04521
Author(s):  
Abhay Raorane ◽  
Zunjar Dubal ◽  
Sandeep Ghatak ◽  
Michael Mawlong ◽  
B. Susngi ◽  
...  
Keyword(s):  
Human Group ◽  
Group A Rotaviruses ◽  
Group A

scholarly journals Detection and Genotyping of Human Group A Rotaviruses by Oligonucleotide Microarray Hybridization

2002 ◽  
Vol 40 (7) ◽  
pp. 2398-2407 ◽  
Author(s):  
V. Chizhikov ◽  
M. Wagner ◽  
A. Ivshina ◽  
Y. Hoshino ◽  
A. Z. Kapikian ◽  
...  
Keyword(s):  
Oligonucleotide Microarray ◽  
Microarray Hybridization ◽  
Human Group ◽  
Group A Rotaviruses ◽  
Group A

scholarly journals Covid-19 and Co-Infection in Children: The Indian Perspectives

2021 ◽  
Author(s):  
Dibyendu Raychaudhuri ◽  
Mihir Sarkar ◽  
Aniket Roy ◽  
Debapriya Roy ◽  
Kalpana Datta ◽  
...  
Keyword(s):  
Prospective Observational Study ◽  
Viral Infections ◽  
Severe Disease ◽  
Tertiary Care ◽  
Supportive Therapy ◽  
Appropriate Treatment ◽  
Group A ◽  
Study Population ◽  
Tertiary Care Institution ◽  
Group B

Abstract BACKGROUND AND OBJECTIVES Assessing the co-infections with COVID-19 is crucial to delineate its true clinical impact. Pediatric information in this aspect is limited. Our study aims to analyze the spectrum of co-infections in pediatric COVID-19 patients and determine the clinical as well as laboratory parameters predicting co-infection. METHODOLOGY In this prospective observational study conducted from June to December, 2020 in a single tertiary care institution, data pertaining to demographic, illness and treatment-related variables were analyzed among two subsets of pediatric patients of age 1 month -12 years with RTPCR-confirmed COVID-19 infection-Group A: those with confirmed co-infection and Group B: moderate to severe disease without co-infection. Among Group A, etiology of co-infection was characterized through relevant microbiological examination within 48 hours admission. RESULT Among our study population, 15.03% and 20.6% had co-infections and moderate to severe disease respectively. Among those with confirmed co-infection, 32.5%, 11.6% and 6.97% recorded blood culture, respiratory secretion and CSF growth respectively, the picture being dominated by Methicillin resistant and sensitive Staph. Aureus. Serum serology demonstrated Scrub typhus infection to be most prevalent. Concurrent respiratory viral infections were seen in 11.6%. Children with co-infection had significantly higher morbidity and need for supportive therapy. Predictors of co-infection were localization of infection, Neutrophil count &gt;/= 10 x 109, age specific lymphopenia, CRP &gt; 100 mg/dL and hyper-ferritinemia. CONCLUSION Co-infections are an important factor prognosticating pediatric Covid infection .Their early detection, prompt and appropriate treatment is of paramount importance.

scholarly journals Enzyme-Linked Immunosorbent Assay Based on Recombinant Human Group C Rotavirus Inner Capsid Protein (VP6) To Detect Human Group C Rotaviruses in Fecal Samples

1998 ◽  
Vol 36 (11) ◽  
pp. 3178-3181 ◽  
Author(s):  
V. L. A. James ◽  
P. R. Lambden ◽  
E. O. Caul ◽  
, and I. N. Clarke
Keyword(s):  
Immunosorbent Assay ◽  
Polyacrylamide Gel Electrophoresis ◽  
Enzyme Linked Immunosorbent Assay ◽  
Human Group ◽  
Fecal Samples ◽  
Reverse Transcription Pcr ◽  
The United Kingdom ◽  
Group C Rotavirus ◽  
Group A ◽  
Rotavirus Infections

A recent study showed that 43% of a population in the United Kingdom were seropositive for group C rotavirus. The higher than expected incidence may be due to limited diagnosis of acute human group C rotavirus infections because no routine test is available. Human group C rotavirus infections are routinely diagnosed by electron microscopy (EM) and a negative group A rotavirus enzyme-linked immunosorbent assay (ELISA) result. An antigen-detection ELISA was developed with hyperimmune antibodies raised to human group C rotavirus recombinant VP6 (Bristol strain) expressed in insect cells. The assay was used to screen fecal samples to determine the prevalence of group C rotavirus infection. Samples positive by ELISA were confirmed by EM, polyacrylamide gel electrophoresis of double-stranded RNA, or detection of the VP6 gene by reverse transcription-PCR. Retrospective analysis indicated a 1 to 2% detection rate of positivity among samples from patients with acute diarrhea.

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