SITE-SPECIFIC: THE FRACTURED HUMANITY OF J. ROBERT OPPENHEIMER

2008 ◽  
Vol 5 (3) ◽  
pp. 547-571 ◽  
Author(s):  
ELIZABETH BORGWARDT

“God knows,” lamented the physicist Isidor Rabi, “I'm not the simplest person, but compared to Oppenheimer, I'm very, very simple.” J. Robert Oppenheimer played myriad roles in the science and politics of modern America: as a physicist working to establish a synthetic American school uniting theoretical and experimental approaches; as a government functionary and “weaponeer” piloting the development and fine-tuning the deployment of the first atomic bombs; as insider, consultant, and oracle speaking in the name of American science; but also as outsider, voice of conscience, and political pariah.

2021 ◽  
Vol 9 ◽  
Author(s):  
Pravin Pathak ◽  
Mohammad Amin Zarandi ◽  
Xiao Zhou ◽  
Janarthanan Jayawickramarajah

With potential applications in materials and especially in light-responsive biomedicine that targets cancer tissue selectively, much research has focused on developing covalent conjugation techniques to tether porphyrinoid units to various biomacromolecules. This review details the key synthetic approaches that have been employed in the recent decades to conjugate porphyrinoids with oligonucleotides and peptides/proteins. In addition, we provide succinct discussions on the subsequent applications of such hybrid systems and also give a brief overview of the rapidly progressing field of porphyrin-antibody conjugates. Since nucleic acid and peptide systems vary in structure, connectivity, functional group availability and placement, as well as stability and solubility, tailored synthetic approaches are needed for conjugating to each of these biomacromolecule types. In terms of tethering to ONs, porphyrins are typically attached by employing bioorthogonal chemistry (e.g., using phosphoramidites) that drive solid-phase ON synthesis or by conducting post-synthesis modifications and subsequent reactions (such as amide couplings, hydrazide-carbonyl reactions, and click chemistry). In contrast, peptides and proteins are typically conjugated to porphyrinoids using their native functional groups, especially the thiol and amine side chains. However, bioorthogonal reactions (e.g., Staudinger ligations, and copper or strain promoted alkyne-azide cycloadditions) that utilize de novo introduced functional groups onto peptides/proteins have seen vigorous development, especially for site-specific peptide-porphyrin tethering. While the ON-porphyrin conjugates have largely been explored for programmed nanostructure self-assembly and artificial light-harvesting applications, there are some reports of ON-porphyrin systems targeting clinically translational applications (e.g., antimicrobial biomaterials and site-specific nucleic acid cleavage). Conjugates of porphyrins with proteinaceous moieties, on the other hand, have been predominantly used for therapeutic and diagnostic applications (especially in photodynamic therapy, photodynamic antimicrobial chemotherapy, and photothermal therapy). The advancement of the field of porphyrinoid-bioconjugation chemistry from basic academic research to more clinically targeted applications require continuous fine-tuning in terms of synthetic strategies and hence there will continue to be much exciting work on porphyrinoid-biomacromolecule conjugation.


2018 ◽  
Vol 43 (4) ◽  
pp. 269-284 ◽  
Author(s):  
Christoffer K. Goth ◽  
Sergey Y. Vakhrushev ◽  
Hiren J. Joshi ◽  
Henrik Clausen ◽  
Katrine T. Schjoldager

2020 ◽  
Author(s):  
Frederico Miguel da Cruz Dinis

Aiming to explore the diverse nature of sound and image, thereby establishing a bridge with the symbiotic creation of sensations and emotions, this paper aims to present the development and construction of a proposal for the creation of site-specific performances, based on sound and visual articulation and intermedia practices.Using as focal points several places, the authors try to look beyond time and develop site-specific intermedia performances, attempting to understand the past and sketching new configurations for the (re)presentation of these places identity, guiding the audience through a journey of perceptual experiences, using ambient electronic music, soundscapes and videos.This presentation also aims to present a practice-as-research project, which had as its starting point the apprehension of memories and the history of these places, emphasizing concepts such as local context, site-specific, sense of place and identity.For this, the authors present the development of some experimental approaches and critical forms of expression and communication that relate or incorporate sound and visual mediums. They also bring forward some concerns about the aesthetic experience and communicative functionality, and how the relationship between art and technology has an effect on artistic culture and new contemporary site-specific intermedia performances.


2021 ◽  
Author(s):  
Ruth Großeholz ◽  
Friederike Wanke ◽  
Nina Glöckner ◽  
Leander Rohr ◽  
Stefan Scholl ◽  
...  

AbstractBrassinosteroids (BR) are one of the key regulators of plant growth and development and have been the object of intense study. Whereas the individual components of the pathway have been well characterized experimentally, we employed computational modeling in combination with quantitative experiments to study the dynamics and regulation of the plasma membrane-localized fast BR response pathway in the epidermal cell layer along the Arabidopsis thaliana root axis that initiates early processes leading to cell elongation growth. The model, consisting of ordinary differential equations, comprises the BR induced hyperpolarization of the plasma membrane, the acidification of the apoplast and subsequent swelling of the cell wall. Utilizing this model and verified by experimental approaches, we demonstrate that the competence of the root epidermal cells for the physiological responses predominantly depends on the amount and activity of H+-ATPases in the plasma membrane. The model further predicted that an influx of cations is required to balance the shift of charges caused by the acidification of the apoplast. A potassium transporter was identified and characterized, which may fulfill this charge compensation. Lastly, we further specified in silico the role of the negative regulator BIR3 in the fine tuning of the cell physiological output.


2004 ◽  
Vol 32 (2) ◽  
pp. 325-338 ◽  
Author(s):  
B Chini ◽  
M Parenti

This review describes the advances in our understanding of the role of G-protein coupled receptor (GPCR) localisation in membrane microdomains known as lipid rafts and caveolae. The growing interest in these specialised regions is due to the recognition that they are involved in the regulation of a number of cell functions, including the fine-tuning of various signalling molecules. As a number of GPCRs have been found to be enriched in lipid rafts and/or caveolae by means of different experimental approaches, we first discuss the pitfalls and uncertainties related to the use of these different procedures. We then analyse the addressing signals that drive and/or stabilise GPCRs in lipid rafts and caveolae, and explore the role of rafts/caveolae in regulating GPCR trafficking, particularly in receptor exo- and endocytosis. Finally, we review the growing evidence that lipid rafts and caveolae participate in the regulation of GPCR signalling by affecting both signalling selectivity and coupling efficacy.


2017 ◽  
Author(s):  
Gerardo Ruiz Amores ◽  
Aitor de las Heras ◽  
Ananda Sanches-Medeiros ◽  
Alistair Elfick ◽  
Rafael Silva-Rocha

ABSTRACTHere, we investigated novel interactions of three global regulators of the network that controls biofilm formation in the model bacteriumEscherichia coliusing computational network analysis, anin vivoreporter assay and physiological validation experiments. We were able to map critical nodes that govern planktonic to biofilm transition and identify 8 new regulatory interactions for CRP, IHF or Fis responsible for the control of the promoters ofrpoS,rpoE,flhD,fliA,csgDandyeaJ. Additionally, anin vivopromoter reporter assay and motility analysis revealed a key role for IHF as a repressor of cell motility through the control of FliA sigma factor expression. This investigation of first stage and mature biofilm formation indicates that biofilm structure is strongly affected by IHF and Fis, while CRP seems to provide a fine-tuning mechanism. Taken together, the analysis presented here shows the utility of combining computational and experimental approaches to generate a deeper understanding of the biofilm formation process in bacteria.


Author(s):  
Richard D. Powell ◽  
James F. Hainfeld ◽  
Carol M. R. Halsey ◽  
David L. Spector ◽  
Shelley Kaurin ◽  
...  

Two new types of covalently linked, site-specific immunoprobes have been prepared using metal cluster labels, and used to stain components of cells. Combined fluorescein and 1.4 nm “Nanogold” labels were prepared by using the fluorescein-conjugated tris (aryl) phosphine ligand and the amino-substituted ligand in the synthesis of the Nanogold cluster. This cluster label was activated by reaction with a 60-fold excess of (sulfo-Succinimidyl-4-N-maleiniido-cyclohexane-l-carboxylate (sulfo-SMCC) at pH 7.5, separated from excess cross-linking reagent by gel filtration, and mixed in ten-fold excess with Goat Fab’ fragments against mouse IgG (obtained by reduction of F(ab’)2 fragments with 50 mM mercaptoethylamine hydrochloride). Labeled Fab’ fragments were isolated by gel filtration HPLC (Superose-12, Pharmacia). A combined Nanogold and Texas Red label was also prepared, using a Nanogold cluster derivatized with both and its protected analog: the cluster was reacted with an eight-fold excess of Texas Red sulfonyl chloride at pH 9.0, separated from excess Texas Red by gel filtration, then deprotected with HC1 in methanol to yield the amino-substituted label.


2020 ◽  
Vol 64 (1) ◽  
pp. 135-153 ◽  
Author(s):  
Lauren Elizabeth Smith ◽  
Adelina Rogowska-Wrzesinska

Abstract Post-translational modifications (PTMs) are integral to the regulation of protein function, characterising their role in this process is vital to understanding how cells work in both healthy and diseased states. Mass spectrometry (MS) facilitates the mass determination and sequencing of peptides, and thereby also the detection of site-specific PTMs. However, numerous challenges in this field continue to persist. The diverse chemical properties, low abundance, labile nature and instability of many PTMs, in combination with the more practical issues of compatibility with MS and bioinformatics challenges, contribute to the arduous nature of their analysis. In this review, we present an overview of the established MS-based approaches for analysing PTMs and the common complications associated with their investigation, including examples of specific challenges focusing on phosphorylation, lysine acetylation and redox modifications.


ASHA Leader ◽  
2017 ◽  
Vol 22 (6) ◽  
Author(s):  
Christi Miller
Keyword(s):  

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