scholarly journals MiR396 is involved in plant response to vernalization and flower development in Agrostis stolonifera

2020 ◽  
Vol 7 (1) ◽  
Author(s):  
Shuangrong Yuan ◽  
Zhigang Li ◽  
Ning Yuan ◽  
Qian Hu ◽  
Man Zhou ◽  
...  
Keyword(s):  
Flower Development ◽  
Expression Patterns ◽  
Creeping Bentgrass ◽  
Agrostis Stolonifera ◽  
Perennial Grasses ◽  
Vernalization Requirement ◽  
Time Control ◽  
Long Day ◽  
Flowering Time Control ◽  
Insight Into

Abstract MicroRNA396 (miR396) has been demonstrated to regulate flower development by targeting growth-regulating factors (GRFs) in annual species. However, its role in perennial grasses and its potential involvement in flowering time control remain unexplored. Here we report that overexpression of miR396 in a perennial species, creeping bentgrass (Agrostis stolonifera L.), alters flower development. Most significantly, transgenic (TG) plants bypass the vernalization requirement for flowering. Gene expression analysis reveals that miR396 is induced by long-day (LD) photoperiod and vernalization. Further study identifies VRN1, VRN2, and VRN3 homologs whose expression patterns in wild-type (WT) plants are similar to those observed in wheat and barley during transition from short-day (SD) to LD, and SD to cold conditions. However, compared to WT controls, TG plants overexpressing miR396 exhibit significantly enhanced VRN1 and VRN3 expression, but repressed VRN2 expression under SD to LD conditions without vernalization, which might be associated with modified expression of methyltransferase genes. Collectively, our results unveil a potentially novel mechanism by which miR396 suppresses the vernalization requirement for flowering which might be related to the epigenetic regulation of VRN genes and provide important new insight into critical roles of a miRNA in regulating vernalization-mediated transition from vegetative to reproductive growth in monocots.

The evolutionarily conserved MOS4-associated complex

2011 ◽  
Vol 6 (5) ◽  
pp. 776-784 ◽  
Author(s):  
Kaeli Johnson ◽  
Oliver Dong ◽  
Xin Li
Keyword(s):  
Biological Function ◽  
Plant Immunity ◽  
Biological Processes ◽  
Future Studies ◽  
Time Control ◽  
Core Member ◽  
Evolutionarily Conserved ◽  
Core Components ◽  
Flowering Time Control ◽  
Insight Into

AbstractRecent work in plant immunity has shown that MOS4, a known intermediate in R protein mediated resistance, is a core member of the nuclear MOS4-associated complex (MAC). This complex is highly conserved in eukaryotes, as orthologous complexes known as the CDC5L-SNEVPrp19-Pso4 complex and the Nineteen complex (NTC) were previously identified in human and yeast, respectively. The involvement of these complexes in pre-mRNA splicing and spliceosome assembly suggests that the MAC probably has a similar function in plants. Double mutants of any two MAC components are lethal, whereas single mutants of the MAC core components mos4, Atcdc5, mac3, and prl1 are all viable and display pleiotropic defects. This suggests that while the MAC is required for some essential biological function such as splicing, individual MAC components are not crucial for complex functionality and likely have regulatory roles in other biological processes such as plant immunity and flowering time control. Future studies on MAC components in Arabidopsis will provide further insight into the regulatory mechanisms of the MAC on specific biological processes.

New Nucleotide Polymorphisms in the BTC1 gene of Sugar Beet

2020 ◽  
Vol 36 (6) ◽  
pp. 49-54
Author(s):  
A.A. Nalbandyan ◽  
T.P. Fedulova ◽  
I.V. Cherepukhina ◽  
T.I. Kryukova ◽  
N.R. Mikheeva ◽  
...  
Keyword(s):  
Sugar Beet ◽  
Flowering Time ◽  
Molecular Genetic ◽  
Bioinformatic Analysis ◽  
Early Flowering ◽  
Nucleotide Polymorphisms ◽  
Nucleotide Substitutions ◽  
Time Control ◽  
Flowering Time Control ◽  
Exon 10

The flowering time control gene of various sugar beet plants has been studied. The BTC1 gene is a regulator for the suppressor (flowering time 1) and inducer (flowering time 2) genes of this physiological process. The F9/R9 primer pair was used for polymerase chain reaction; these primers are specific to the BTC1 gene region containing exon 9, as well as intron and exon 10. For the first time, nucleotide substitutions in exon 10 of BTC1 gene were identified in bolting sensitive samples (HF1 and BF1), which led to a change in the amino acid composition of the coded polypeptide chain. Based on the results of bioinformatic analysis, it can be assumed that certain nucleotide polymorphisms in the BTC1 gene may determine with a high probability the predisposition of sugar beet genotypes to early flowering. The use of the Geneious Prime tool for the analysis of the BTC1 gene sequences may allow the culling of genotypes prone to early flowering at early stages of selection. sugar beet, flowering gene, BTC1, genetic polymorphism, PCR, molecular genetic markers, selection

Fluorescent protein expression in temperature tolerant and susceptible reef-building corals

2021 ◽  
pp. 1-10
Author(s):  
Exequiel Gabriel S. Dizon ◽  
Jeric P. Da-Anoy ◽  
Melissa S. Roth ◽  
Cecilia Conaco
Keyword(s):  
Spectral Properties ◽  
Coral Species ◽  
Fluorescent Protein ◽  
Fluorescent Proteins ◽  
Expression Profiles ◽  
Expression Patterns ◽  
Antioxidant Properties ◽  
Variable Expression ◽  
Acropora Digitifera ◽  
Insight Into

Abstract Fluorescent proteins (FPs) are reported to play an important role as photoprotectants and antioxidants in corals subjected to stressful conditions. Identifying the various FP genes expressed and FP gene expression patterns under stress in diverse coral species can provide insight into FP function. In this study, we identified 16 putative FP homologues from the transcriptomes of corals with varying susceptibility to elevated temperature, including Acropora digitifera, Favites colemani, Montipora digitata and Seriatopora caliendrum. Each coral expressed a different complement of FP transcripts, which were predicted to have distinct spectral properties. The most diverse and abundant repertoire of FP transcripts, including at least 6 green FPs, were expressed in the temperature-tolerant coral, F. colemani. In comparison, the other corals expressed fewer FP types. Specific FP transcripts exhibited variable expression profiles in coral fragments subjected to 32 ± 1 °C (treatment) or 28 ± 1 °C (control) for up to 72 h, suggesting that distinct FPs may have different roles. Further studies on the expression of the proteins encoded by these FP transcripts, their fluorescence activity, tissue localization, and possible antioxidant properties, are needed to reveal their contribution to thermal stress tolerance in certain species of corals.

scholarly journals Message ends: RNA 3′ processing and flowering time control

2013 ◽  
Vol 65 (2) ◽  
pp. 353-363 ◽  
Author(s):  
Katarzyna Rataj ◽  
Gordon G. Simpson
Keyword(s):  
Flowering Time ◽  
Time Control ◽  
Flowering Time Control

Discovery and Characterization of Differentially Expressed Soybean MiRNAs and Their Targets During Soybean Mosaic Virus Infection Unveils Novel Insight Into Soybean-SMV Interaction

2021 ◽  
Author(s):  
Bowen Li ◽  
Adhimoolam Karthikeyan ◽  
Liqun Wang ◽  
Jinlong Yin ◽  
Tongtong Jin ◽  
...  
Keyword(s):  
Virus Infection ◽  
Mosaic Virus ◽  
Target Genes ◽  
Soybean Mosaic Virus ◽  
Expression Patterns ◽  
Defense Responses ◽  
Pcr Analysis ◽  
Functional Annotations ◽  
Additional Information ◽  
Insight Into

Abstract Background: Soybean mosaic virus (SMV) is the most devastating pathogen of soybean. MicroRNAs (miRNAs) are a class of non-coding RNAs (21-24 nucleotides) and play important roles in regulating defense responses against pathogens. However, miRNA's response to SMV in soybean is not as well documented. Result: In this study, we analyzed 18 miRNA libraries, including three biological replicates from two soybean lines (Resistant and susceptible lines to SMV strain SC3 selected from the near-isogenic lines of Qihuang No. 1× Nannong1138-2) after virus infection at three different time intervals (0 dpi, 7 dpi, and 14 dpi). A total of 1,092 miRNAs, including 608 known miRNAs and 484 novel miRNAs were detected. Differential expression analyses identified the miRNAs responded during soybean-SMV interaction. Then, miRNAs potential target genes were predicted via data mining, and functional annotation was done by Gene Ontology (GO) analysis. Eventually, the expression patterns of several miRNAs validated by quantitative real-time PCR analysis are consistent with sequencing results. Conclusion: We have identified a large number of miRNAs and their target genes and also functional annotations. Our study provides additional information on soybean miRNAs and an insight into the role of miRNAs during SMV-infection in soybean.

scholarly journals Photocontrol of Flowering and Extension Growth in the Long-day Plant Pansy

2003 ◽  
Vol 128 (4) ◽  
pp. 479-485 ◽  
Author(s):  
Erik S. Runkle ◽  
Royal D. Heins
Keyword(s):  
Flower Development ◽  
Red Light ◽  
Reproductive Development ◽  
Extension Growth ◽  
Separate Experiment ◽  
Flower Initiation ◽  
Minimal Extension ◽  
Short Day ◽  
Long Day ◽  
Light Duration

Plastics that selectively reduce the transmission of far-red light (FR, 700 to 800 nm) reduce extension growth of many floricultural crops. However, FR-deficient (FRd) environments delay flowering in some long-day plants (LDPs), including `Crystal Bowl Yellow' pansy (Viola ×wittrockiana Gams). Our objective was to determine if FR light could be added to an otherwise FRd environment to facilitate flowering with minimal extension growth. In one experiment, plants were grown under a 16-hour FRd photoperiod, and FR-rich light was added during portions of the day or night. For comparison, plants were also grown with a 9-hour photoperiod [short-day (SD) control] or under a neutral (N) filter with a 16-hour photoperiod (long day control). Flowering was promoted most (i.e., percent of plants that flowered increased and time to flower decreased) when FR-rich light was added during the entire 16-hour photoperiod, during the last 4 hours of the photoperiod, or during the first or second 4 hours after the end of the photoperiod. In a separate experiment, pansy was grown under an FRd or N filter with a 9-hour photoperiod plus 0, 0.5, 1, 2, or 4 hours of night interruption (NI) lighting that delivered a red (R, 600 to 700 nm) to FR ratio of 0.56 (low), 1.28 (moderate), or 7.29 (high). Under the N filter, the minimum NI duration that increased percent flowering was 2 hours with a moderate or low R:FR and 4 hours with a high R:FR. Under the FRd filter, 2 or 4 hours of NI lighting with a moderate or low R:FR, respectively, was required to increase percent flowering, but a 4-hour NI with a high R:FR failed to promote flowering. Pansy appears to be day-neutral with respect to flower initiation and a quantitative LDP with respect to flower development. The promotion of reproductive development was related linearly to the promotion of extension growth. Therefore, it appears that in LDPs such as pansy, light duration and quality concomitantly promote extension growth and flowering, and cannot readily be separated with lighting strategies.

scholarly journals Transcriptome-Wide Analyses Provide Insights into Development of the Hedychium Coronarium Flower, Revealing Potential Roles of PTL

2020 ◽  
Author(s):  
Tong Zhao ◽  
Alma Piñeyro-Nelson ◽  
Qianxia Yu ◽  
Xiaoying Hu ◽  
Huanfang Liu ◽  
...  
Keyword(s):  
In Situ Hybridization ◽  
Flower Development ◽  
Molecular Mechanisms ◽  
Expression Patterns ◽  
Floral Organ ◽  
Mrna In Situ Hybridization ◽  
Hedychium Coronarium ◽  
Organ Identity

Abstract Background:The flower of Hedychium coronarium possesses highly specialized floral organs: a synsepalous calyx, petaloid staminodes and a labellum. The formation of these organs is controlled by two gene categories: floral organ identity genes and organ boundary genes, which may function individually or jointly during flower development. Although the floral organogenesis of H. coronarium has been studied at the morphological level, the underlying molecular mechanisms involved in its floral development still remain poorly understood. In addition, previous works analyzing the role of MADS-box genes in controlling floral organ specification in some Zingiberaceae did not address the molecular mechanisms involved in the formation of particular organ morphologies that emerge later in flower development, such as the synsepalous calyx formed through intercalary growth of adjacent sepals. Results:Here, we used comparative transcriptomics combined with Real-time quantitative PCR and mRNA in situ hybridization to investigate gene expression patterns of ABC-class genes in H. coronarium flowers, as well as the homolog of the organ boundary gene PETAL LOSS (HcPTL). qRT-PCR detection showed that HcAP3 and HcAG were expressed in both the petaloid staminode and the fertile stamen. mRNA in situ hybridization showed that HcPTL was expressed in developing meristems, including cincinnus primordia, floral primordia, common primordia and almost all new initiating floral organ primordia.Conclusions:Our studies found that stamen/petal identity or stamen fertility in H. coronarium was not necessarily correlated with the differential expression of HcAP3 and HcAG. We also found a novel spatio-temporal expression pattern for HcPTL mRNA, suggesting it may have evolved a lineage-specific role in the morphogenesis of the Hedychium flower. Our study provides a new transcriptome reference and a functional hypothesis regarding the role of a boundary gene in organ fusion that should be further addressed through phylogenetic analyzes of this gene, as well as functional studies.

scholarly journals Estimation of pasture herbage intake by beef cattle based on n-alkanes as markers

2017 ◽  
Vol 70 (1) ◽  
Author(s):  
Piotr Nowakowski ◽  
Katarzyna Czyz ◽  
Marta Iwaszkiewicz
Keyword(s):  
Minimally Invasive ◽  
National Park ◽  
Dry Matter ◽  
Nutritive Value ◽  
Creeping Bentgrass ◽  
Beef Cows ◽  
Agrostis Stolonifera ◽  
Dry Matter Intake ◽  
Herbage Intake ◽  
Invasive Method

The aim of the study was to evaluate herbage dry matter intake in 16 beef cows which grazed continuously on permanent pastures within the “The Warta Estuary” National Park (Poland), using the minimally invasive method based on <em>n</em>-alkanes as markers (C<sub>29</sub>, C<sub>31</sub>, C<sub>33</sub>). Significant differences were observed in the nutritive value of herbage collected for analyses by cutting or nipping. The calculated content of energy and protein in the nipped herbage was higher: UFL by 58.1% and PDI by 50%, with a higher digestibility of nutrients. The values obtained for DM intake in pasture herbage by cows were closest to the standards when calculations were based on the C<sub>29</sub>/C<sub>32</sub> pair of <em>n</em>-alkanes. However, the best prediction of DM intake estimation from creeping bentgrass (<em>Agrostis stolonifera</em>) pasture, in agreement with the accepted energy and protein standards, was based on the proportions between alkanes C<sub>31</sub>/C<sub>32</sub>.

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