scholarly journals Large-scale lipid analysis with C=C location and sn-position isomer resolving power

2020 ◽  
Vol 11 (1) ◽  
Author(s):  
Wenbo Cao ◽  
Simin Cheng ◽  
Jing Yang ◽  
Jiaxin Feng ◽  
Wenpeng Zhang ◽  
...  
Author(s):  
Scott M Croom ◽  
Matt S Owers ◽  
Nicholas Scott ◽  
Henry Poetrodjojo ◽  
Brent Groves ◽  
...  

Abstract We have entered a new era where integral-field spectroscopic surveys of galaxies are sufficiently large to adequately sample large-scale structure over a cosmologically significant volume. This was the primary design goal of the SAMI Galaxy Survey. Here, in Data Release 3 (DR3), we release data for the full sample of 3068 unique galaxies observed. This includes the SAMI cluster sample of 888 unique galaxies for the first time. For each galaxy, there are two primary spectral cubes covering the blue (370–570 nm) and red (630–740 nm) optical wavelength ranges at spectral resolving power of R = 1808 and 4304 respectively. For each primary cube, we also provide three spatially binned spectral cubes and a set of standardized aperture spectra. For each galaxy, we include complete 2D maps from parameterized fitting to the emission-line and absorption-line spectral data. These maps provide information on the gas ionization and kinematics, stellar kinematics and populations, and more. All data are available online through Australian Astronomical Optics (AAO) Data Central.


Genetics ◽  
2001 ◽  
Vol 157 (4) ◽  
pp. 1749-1757 ◽  
Author(s):  
Zhukuan Cheng ◽  
Gernot G Presting ◽  
C Robin Buell ◽  
Rod A Wing ◽  
Jiming Jiang

AbstractLarge-scale physical mapping has been a major challenge for plant geneticists due to the lack of techniques that are widely affordable and can be applied to different species. Here we present a physical map of rice chromosome 10 developed by fluorescence in situ hybridization (FISH) mapping of bacterial artificial chromosome (BAC) clones on meiotic pachytene chromosomes. This physical map is fully integrated with a genetic linkage map of rice chromosome 10 because each BAC clone is anchored by a genetically mapped restriction fragment length polymorphism marker. The pachytene chromosome-based FISH mapping shows a superior resolving power compared to the somatic metaphase chromosome-based methods. The telomere-centromere orientation of DNA clones separated by 40 kb can be resolved on early pachytene chromosomes. Genetic recombination is generally evenly distributed along rice chromosome 10. However, the highly heterochromatic short arm shows a lower recombination frequency than the largely euchromatic long arm. Suppression of recombination was found in the centromeric region, but the affected region is far smaller than those reported in wheat and barley. Our FISH mapping effort also revealed the precise genetic position of the centromere on chromosome 10.


2014 ◽  
Vol 10 (S312) ◽  
pp. 36-38
Author(s):  
Junfeng Wang

AbstractThe circum-nuclear region in an active galaxy is often complex with presence of high excitation gas, collimated radio outflow, and star formation activities, besides the actively accreting supermassive black hole. The unique spatial resolving power of Chandra X-ray imaging spectroscopy enables more investigations to disentangle the active galactic nuclei and starburst activities. For galaxies in the throes of a violent merging event such as NGC6240, we were able to resolve the high temperature gas surrounding its binary active black holes and discovered a large scale soft X-ray halo.


2021 ◽  
Vol 162 (6) ◽  
pp. 298
Author(s):  
Gary J. Hill ◽  
Hanshin Lee ◽  
Phillip J. MacQueen ◽  
Andreas Kelz ◽  
Niv Drory ◽  
...  

Abstract The Hobby–Eberly Telescope (HET) Dark Energy Experiment (HETDEX) is undertaking a blind wide-field low-resolution spectroscopic survey of 540 deg2 of sky to identify and derive redshifts for a million Lyα-emitting galaxies in the redshift range 1.9 < z < 3.5. The ultimate goal is to measure the expansion rate of the universe at this epoch, to sharply constrain cosmological parameters and thus the nature of dark energy. A major multiyear Wide-Field Upgrade (WFU) of the HET was completed in 2016 that substantially increased the field of view to 22′ diameter and the pupil to 10 m, by replacing the optical corrector, tracker, and Prime Focus Instrument Package and by developing a new telescope control system. The new, wide-field HET now feeds the Visible Integral-field Replicable Unit Spectrograph (VIRUS), a new low-resolution integral-field spectrograph (LRS2), and the Habitable Zone Planet Finder, a precision near-infrared radial velocity spectrograph. VIRUS consists of 156 identical spectrographs fed by almost 35,000 fibers in 78 integral-field units arrayed at the focus of the upgraded HET. VIRUS operates in a bandpass of 3500−5500 Å with resolving power R ≃ 800. VIRUS is the first example of large-scale replication applied to instrumentation in optical astronomy to achieve spectroscopic surveys of very large areas of sky. This paper presents technical details of the HET WFU and VIRUS, as flowed down from the HETDEX science requirements, along with experience from commissioning this major telescope upgrade and the innovative instrumentation suite for HETDEX.


The Auk ◽  
1988 ◽  
Vol 105 (3) ◽  
pp. 516-528 ◽  
Author(s):  
John C. Avise ◽  
Robert M. Zink

Abstract Surveys of electrophoretic variation in proteins, and restriction site variation in mitochondrial DNA (mtDNA), were conducted to assess the resolving power of these molecular genetic techniques to distinguish four pairs of avian sibling taxa. Samples of rails (Rallus elegans and R. longirostris), dowitchers (Limnodromus scolopaceus and L. griseus), grackles (Quiscalus major and Q. mexicanus), and titmice (Parus bicolor bicolor and P. b. atricristatus) were assayed for allozymes encoded by 34-37 nuclear loci, and for an average of 77 mtDNA restriction sites per individual by 19 endonucleases. MtDNA's of the two rail species showed large-scale size polymorphism and individual heteroplasmy, the first such findings of these molecular features in an avian species. Genetic distances based on allozyme comparisons were small for all assayed taxa (Nei's D ≤ 0.063). The mtDNA assays offered consistently greater resolving power, providing at least five fixed restriction site differences for samples of any taxon pair. The Long-billed and Short-billed dowitchers were especially divergent, differing by at least 24 assayed mtDNA restriction sites and an estimated nucleotide sequence divergence of p = 0.082. We compared these results to previous reports of genetic distances within and among closely related bird species. The mtDNA divergence among dowitchers is near the high end of the scale of such estimates for avian congeners. The mtDNA distances between the pairs of rails (p = 0.006), titmice (p = 0.004), and grackles (p = 0.016) were typical for extremely closely related species, and overlap maximum values reported for some avian conspecifics.


2018 ◽  
Vol 115 (43) ◽  
pp. E10147-E10156 ◽  
Author(s):  
Violaine Dubois ◽  
Albertus Viljoen ◽  
Laura Laencina ◽  
Vincent Le Moigne ◽  
Audrey Bernut ◽  
...  

Mycobacterium abscessus is a peculiar rapid-growing Mycobacterium (RGM) capable of surviving within eukaryotic cells thanks to an arsenal of virulence genes also found in slow-growing mycobacteria (SGM), such as Mycobacterium tuberculosis. A screen based on the intracellular survival in amoebae and macrophages (MΦ) of an M. abscessus transposon mutant library revealed the important role of MAB_0855, a yet uncharacterized Mycobacterial membrane protein Large (MmpL). Large-scale comparisons with SGM and RGM genomes uncovered MmpL12 proteins as putative orthologs of MAB_0855 and a locus-scale synteny between the MAB_0855 and Mycobacterium chelonae mmpL8 loci. A KO mutant of the MAB_0855 gene, designated herein as mmpL8MAB, had impaired adhesion to MΦ and displayed a decreased intracellular viability. Despite retaining the ability to block phagosomal acidification, like the WT strain, the mmpL8MAB mutant was delayed in damaging the phagosomal membrane and in making contact with the cytosol. Virulence attenuation of the mutant was confirmed in vivo by impaired zebrafish killing and a diminished propensity to induce granuloma formation. The previously shown role of MmpL in lipid transport prompted us to investigate the potential lipid substrates of MmpL8MAB. Systematic lipid analysis revealed that MmpL8MAB was required for the proper expression of a glycolipid entity, a glycosyl diacylated nonadecyl diol (GDND) alcohol comprising different combinations of oleic and stearic acids. This study shows the importance of MmpL8MAB in modifying interactions between the bacteria and phagocytic cells and in the production of a previously unknown glycolipid family.


1999 ◽  
Vol 173 ◽  
pp. 243-248
Author(s):  
D. Kubáček ◽  
A. Galád ◽  
A. Pravda

AbstractUnusual short-period comet 29P/Schwassmann-Wachmann 1 inspired many observers to explain its unpredictable outbursts. In this paper large scale structures and features from the inner part of the coma in time periods around outbursts are studied. CCD images were taken at Whipple Observatory, Mt. Hopkins, in 1989 and at Astronomical Observatory, Modra, from 1995 to 1998. Photographic plates of the comet were taken at Harvard College Observatory, Oak Ridge, from 1974 to 1982. The latter were digitized at first to apply the same techniques of image processing for optimizing the visibility of features in the coma during outbursts. Outbursts and coma structures show various shapes.


1994 ◽  
Vol 144 ◽  
pp. 29-33
Author(s):  
P. Ambrož

AbstractThe large-scale coronal structures observed during the sporadically visible solar eclipses were compared with the numerically extrapolated field-line structures of coronal magnetic field. A characteristic relationship between the observed structures of coronal plasma and the magnetic field line configurations was determined. The long-term evolution of large scale coronal structures inferred from photospheric magnetic observations in the course of 11- and 22-year solar cycles is described.Some known parameters, such as the source surface radius, or coronal rotation rate are discussed and actually interpreted. A relation between the large-scale photospheric magnetic field evolution and the coronal structure rearrangement is demonstrated.


2000 ◽  
Vol 179 ◽  
pp. 205-208
Author(s):  
Pavel Ambrož ◽  
Alfred Schroll

AbstractPrecise measurements of heliographic position of solar filaments were used for determination of the proper motion of solar filaments on the time-scale of days. The filaments have a tendency to make a shaking or waving of the external structure and to make a general movement of whole filament body, coinciding with the transport of the magnetic flux in the photosphere. The velocity scatter of individual measured points is about one order higher than the accuracy of measurements.


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