scholarly journals Insights into eukaryogenesis from the fossil record

2020 ◽  
Vol 10 (4) ◽  
pp. 20190105 ◽  
Author(s):  
Susannah M. Porter

Eukaryogenesis—the process by which the eukaryotic cell emerged—has long puzzled scientists. It has been assumed that the fossil record has little to say about this process, in part because important characters such as the nucleus and mitochondria are rarely preserved, and in part because the prevailing model of early eukaryotes implies that eukaryogenesis occurred before the appearance of the first eukaryotes recognized in the fossil record. Here, I propose a different scenario for early eukaryote evolution than is widely assumed. Rather than crown group eukaryotes originating in the late Paleoproterozoic and remaining ecologically minor components for more than half a billion years in a prokaryote-dominated world, I argue for a late Mesoproterozoic origin of the eukaryotic crown group, implying that eukaryogenesis can be studied using the fossil record. I review the proxy records of four crown group characters: the capacity to form cysts as evidenced by the presence of excystment structures; a complex cytoskeleton as evidenced by spines or pylomes; sterol synthesis as evidenced by steranes; and aerobic respiration—and therefore mitochondria—as evidenced by eukaryotes living in oxic environments, and argue that it might be possible to use these proxy records to infer the order in which these characters evolved. The records indicate that both cyst formation and a complex cytoskeleton appeared by late Paleoproterozoic time, and sterol synthesis appeared in the late Mesoproterozioc or early Neoproterozoic. The origin of aerobic respiration cannot as easily be pinned down, but current evidence permits the possibility that it evolved sometime in the Mesoproterozoic.

2018 ◽  
Vol 115 (21) ◽  
pp. 5323-5331 ◽  
Author(s):  
Allison C. Daley ◽  
Jonathan B. Antcliffe ◽  
Harriet B. Drage ◽  
Stephen Pates

Euarthropoda is one of the best-preserved fossil animal groups and has been the most diverse animal phylum for over 500 million years. Fossil Konservat-Lagerstätten, such as Burgess Shale-type deposits (BSTs), show the evolution of the euarthropod stem lineage during the Cambrian from 518 million years ago (Ma). The stem lineage includes nonbiomineralized groups, such as Radiodonta (e.g., Anomalocaris) that provide insight into the step-by-step construction of euarthropod morphology, including the exoskeleton, biramous limbs, segmentation, and cephalic structures. Trilobites are crown group euarthropods that appear in the fossil record at 521 Ma, before the stem lineage fossils, implying a ghost lineage that needs to be constrained. These constraints come from the trace fossil record, which show the first evidence for total group Euarthropoda (e.g., Cruziana, Rusophycus) at around 537 Ma. A deep Precambrian root to the euarthropod evolutionary lineage is disproven by a comparison of Ediacaran and Cambrian lagerstätten. BSTs from the latest Ediacaran Period (e.g., Miaohe biota, 550 Ma) are abundantly fossiliferous with algae but completely lack animals, which are also missing from other Ediacaran windows, such as phosphate deposits (e.g., Doushantuo, 560 Ma). This constrains the appearance of the euarthropod stem lineage to no older than 550 Ma. While each of the major types of fossil evidence (BSTs, trace fossils, and biomineralized preservation) have their limitations and are incomplete in different ways, when taken together they allow a coherent picture to emerge of the origin and subsequent radiation of total group Euarthropoda during the Cambrian.


2009 ◽  
Vol 83 (4) ◽  
pp. 562-574 ◽  
Author(s):  
Daniel B. Blake ◽  
Roger W. Portell

Oyenaster oblidus, Ocalaster timucum, and Ocalaster seloyi are new genera and species of the family Goniasteridae (Asteroidea) described from the Eocene Ocala Limestone of Florida. Although the fossil record of asteroids is sketchy, goniasterids appear to have been important contributors to marine communities since at least the Middle Jurassic. Similarities between living goniasterids and their fossil precursors indicate that plesiomorphy and convergence have been important in family history, and as a result, taxonomic interpretation is challenging. Even partial fossil goniasterids are rare, forcing systematists to rely heavily on isolated marginal ossicles, although some authors have expressed the need for caution. Building around three new taxa, we suggest that broader approaches can aid systematic interpretation of all crown-group asteroids. We also suggest that the inevitably idiosyncratic interpretations of marginal-based systematics can be partially tested using blind evaluations.


2004 ◽  
Vol 10 ◽  
pp. 35-50 ◽  
Author(s):  
Susannah M. Porter

The Cambrian explosion can be thought of as the culmination of a diversification of eukaryotes that had begun several hundred million years before. Eukaryotes - one of the three domains of life — originated by late Archean time, and probably underwent a long period of stem group evolution during the Paleoproterozoic Era. A suite of taxonomically resolved body fossils and biomarkers, together with estimates of acritarch and compression fossil diversity, suggest that while divergences among major eukaryotic clades or 'super-groups' may have occurred as early as latest Paleoproterozoic through Mesoproterozoic time, the main phase of eukaryotic diversification took place several hundred million years later, during the middle Neoproterozoic Era. Hypotheses for Neoproterozoic diversification must therefore explain why eukaryotic diversification is delayed several hundred million years after the origin of the eukaryotic crown group, and why diversification appears to have occurred independently within several eukaryotic super-groups at the same time. Evolutionary explanations for eukaryotic diversification (the evolution of sex; the acquisition of plastids) fail to account for these patterns, but ecological explanations (the advent of microbial predators) and environmental explanations (changes in ocean chemistry) are both consistent with them. Both ecology and environment may have played a role in triggering or at least fueling Neoproterozoic eukaryotic diversification.


Paleobiology ◽  
2013 ◽  
Vol 39 (1) ◽  
pp. 95-108 ◽  
Author(s):  
Martin Dohrmann ◽  
Sergio Vargas ◽  
Dorte Janussen ◽  
Allen G. Collins ◽  
Gert Wörheide

Reconciliation of paleontological and molecular phylogenetic evidence holds great promise for a better understanding of the temporal succession of cladogenesis and character evolution, especially for taxa with a fragmentary fossil record and uncertain classification. In zoology, studies of this kind have largely been restricted to Bilateria. Hexactinellids (glass sponges) readily lend themselves to test such an approach for early-branching (non-bilaterian) animals: they have a long and rich fossil record, but for certain taxa paleontological evidence is still scarce or ambiguous. Furthermore, there is a lack of consensus for taxonomic interpretations, and discrepancies exist between neontological and paleontological classification systems. Using conservative fossil calibration constraints and the largest molecular phylogenetic data set assembled for this group, we infer divergence times of crown-group Hexactinellida in a Bayesian relaxed molecular clock framework. With some notable exceptions, our results are largely congruent with interpretations of the hexactinellid fossil record, but also indicate long periods of undocumented evolution for several groups. This study illustrates the potential of an integrated molecular/paleobiological approach to reconstructing the evolution of challenging groups of organisms.


2007 ◽  
Vol 44 (2) ◽  
pp. 267-274 ◽  
Author(s):  
Hillary C Maddin ◽  
Robert R Reisz

Morphological features of the terminal phalanges of extinct tetrapods can be used to infer whether or not keratinous claws were present even though these structures are not preserved in the fossil record. Such features as dense vascularization grooves and foramina, and a general claw-like morphology, are present in some of the earliest fully terrestrial tetrapods, the Permo-Carboniferous synapsids. Early synapsids are represented by a rich fossil record that preserves the detailed anatomy of the terminal phalanges and allows for an examination of the early evolution of these structures in a well-resolved phylogenetic context. The pattern of change in the morphology of the terminal phalanges of five basal synapsids, Cotylorhynchus romeri, Varanops sp., Edaphosaurus boanerges, Haptodus garnettensis, and Dimetrodon limbatus, reveals a clear trend from a broad, flat, and spatulate morphology in the basal taxa to a tall, narrow, and curved structure. This trend in overall shape change does not reflect changes in feeding behaviour. The size and shape of the flexor tubercle appears to be a factor of size and function, rather than possessing a phylogenetically informative signal. The osteological features used to infer the presence of a keratinous sheath in the synapsids are also observed in the non-amniote taxon Diadectes absitus. This indicates that claws were not an amniote innovation and that they instead originated somewhere outside the crown group Amniota.


PLoS ONE ◽  
2021 ◽  
Vol 16 (4) ◽  
pp. e0248369
Author(s):  
Nathan A. Jud ◽  
Sarah E. Allen ◽  
Chris W. Nelson ◽  
Carolina L. Bastos ◽  
Joyce G. Chery

Paullinieae are a diverse group of tropical and subtropical climbing plants that belong to the soapberry family (Sapindaceae). The six genera in this tribe make up approximately one-quarter of the species in the family, but a sparse fossil record limits our understanding of their diversification. Here, we provide the first description of anatomically preserved fossils of Paullinieae and we re-evaluate other macrofossils that have been attributed to the tribe. We identified permineralized fossil roots in collections from the lower Miocene Cucaracha Formation where it was exposed along the Culebra Cut of the Panama Canal. We prepared the fossils using the cellulose acetate peel technique and compared the anatomy with that of extant Paullinieae. The fossil roots preserve a combination of characters found only in Paullinieae, including peripheral secondary vascular strands, vessel dimorphism, alternate intervessel pitting with coalescent apertures, heterocellular rays, and axial parenchyma strands of 2–4 cells, often with prismatic crystals. We also searched the paleontological literature for other occurrences of the tribe. We re-evaluated leaf fossils from western North America that have been assigned to extant genera in the tribe by comparing their morphology to herbarium specimens and cleared leaves. The fossil leaves that were assigned to Cardiospermum and Serjania from the Paleogene of western North America are likely Sapindaceae; however, they lack diagnostic characters necessary for inclusion in Paullinieae and should be excluded from those genera. Therefore, the fossils described here as Ampelorhiza heteroxylon gen. et sp. nov. are the oldest macrofossil evidence of Paullinieae. They provide direct evidence of the development of a vascular cambial variant associated with the climbing habit in Sapindaceae and provide strong evidence of the diversification of crown-group Paullinieae in the tropics by 18.5–19 million years ago.


2019 ◽  
Author(s):  
Graham E. Budd ◽  
Richard P. Mann

ABSTRACTThe fossil record of the origins of major groups is of great interests to many biologists, especially when the fossil record apparently conflicts with timings based on molecular clock estimates. Here we model the diversity of “stem” (basal) and “crown” (modern) members of groups as seen in the fossil record, using a “birth-death model”. Under background conditions, the stem group members must diversify rapidly until the modern crown group emerges, at which point their diversity rapidly collapses, followed shortly by their extinction. Mass extinctions can disturb this pattern to create very diverse stem groups such as the dinosaurs and trilobites. Understanding these null-hypothesis patterns is essential for framing ecological and evolutionary explanations for how major groups originate and subsequently evolve.


2021 ◽  
Vol 288 (1960) ◽  
Author(s):  
Marc A. Mapalo ◽  
Ninon Robin ◽  
Brendon E. Boudinot ◽  
Javier Ortega-Hernández ◽  
Phillip Barden

Tardigrades are a diverse group of charismatic microscopic invertebrates that are best known for their ability to survive extreme conditions. Despite their long evolutionary history and global distribution in both aquatic and terrestrial environments, the tardigrade fossil record is exceedingly sparse. Molecular clocks estimate that tardigrades diverged from other panarthropod lineages before the Cambrian, but only two definitive crown-group representatives have been described to date, both from Cretaceous fossil deposits in North America. Here, we report a third fossil tardigrade from Miocene age Dominican amber. Paradoryphoribius chronocaribbeus gen. et sp. nov. is the first unambiguous fossil representative of the diverse superfamily Isohypsibioidea, as well as the first tardigrade fossil described from the Cenozoic. We propose that the patchy tardigrade fossil record can be explained by the preferential preservation of these microinvertebrates as amber inclusions, coupled with the scarcity of fossiliferous amber deposits before the Cretaceous.


2021 ◽  
Vol 7 (24) ◽  
pp. eabf2257
Author(s):  
Alan J. S. Beavan ◽  
Davide Pisani ◽  
Philip C. J. Donoghue

Molecular evolutionary time scales are expected to predate the fossil evidence, but, particularly for major evolutionary radiations, they can imply extremely protracted stem lineages predating the origin of living clades, leading to claims of systematic overestimation of divergence times. We use macroevolutionary birth-death models to describe the range of total-group and crown-group ages expected under constant rates of speciation and extinction. We extend current predictions on origination times for crown- and total-groups, and extinction of stem-groups, demonstrating that there is broad variance in these predictions. Under constant rates of speciation and extinction, we show that the distribution of expected arthropod total-group ages is consistent with molecular clock estimates. The fossil record cannot be read literally, and our results preclude attempts to interpret the antiquity of clades based on the co-occurrence of stem- and crown-representatives.


2019 ◽  
Vol 286 (1898) ◽  
pp. 20182418 ◽  
Author(s):  
Thomas J. D. Halliday ◽  
Mario dos Reis ◽  
Asif U. Tamuri ◽  
Henry Ferguson-Gow ◽  
Ziheng Yang ◽  
...  

Resolving the timing and pattern of early placental mammal evolution has been confounded by conflict among divergence date estimates from interpretation of the fossil record and from molecular-clock dating studies. Despite both fossil occurrences and molecular sequences favouring a Cretaceous origin for Placentalia, no unambiguous Cretaceous placental mammal has been discovered. Investigating the differing patterns of evolution in morphological and molecular data reveals a possible explanation for this conflict. Here, we quantified the relationship between morphological and molecular rates of evolution. We show that, independent of divergence dates, morphological rates of evolution were slow relative to molecular evolution during the initial divergence of Placentalia, but substantially increased during the origination of the extant orders. The rapid radiation of placentals into a highly morphologically disparate Cenozoic fauna is thus not associated with the origin of Placentalia, but post-dates superordinal origins. These findings predict that early members of major placental groups may not be easily distinguishable from one another or from stem eutherians on the basis of skeleto-dental morphology. This result supports a Late Cretaceous origin of crown placentals with an ordinal-level adaptive radiation in the early Paleocene, with the high relative rate permitting rapid anatomical change without requiring unreasonably fast molecular evolutionary rates. The lack of definitive Cretaceous placental mammals may be a result of morphological similarity among stem and early crown eutherians, providing an avenue for reconciling the fossil record with molecular divergence estimates for Placentalia.


Sign in / Sign up

Export Citation Format

Share Document