scholarly journals Active beating modes of two clamped filaments driven by molecular motors

2022 ◽  
Vol 19 (186) ◽  
Author(s):  
Laura Collesano ◽  
Isabella Guido ◽  
Ramin Golestanian ◽  
Andrej Vilfan

Biological cilia pump the surrounding fluid by asymmetric beating that is driven by dynein motors between sliding microtubule doublets. The complexity of biological cilia raises the question about minimal systems that can re-create similar patterns of motion. One such system consists of a pair of microtubules that are clamped at the proximal end. They interact through dynein motors that cover one of the filaments and pull against the other one. Here, we study theoretically the static shapes and the active dynamics of such a system. Using the theory of elastica, we analyse the shapes of two filaments of different lengths with clamped ends. Starting from equal lengths, we observe a transition similar to Euler buckling leading to a planar shape. When further increasing the length ratio, the system assumes a non-planar shape with spontaneously broken chiral symmetry after a secondary bifurcation and then transitions to planar again. The predicted curves agree with experimentally observed shapes of microtubule pairs. The dynamical system can have a stable fixed point, with either bent or straight filaments, or limit cycle oscillations. The latter match many properties of ciliary motility, demonstrating that a two-filament system can serve as a minimal actively beating model.

2018 ◽  
Vol 28 (04) ◽  
pp. 1830011
Author(s):  
Mio Kobayashi ◽  
Tetsuya Yoshinaga

A one-dimensional Gaussian map defined by a Gaussian function describes a discrete-time dynamical system. Chaotic behavior can be observed in both Gaussian and logistic maps. This study analyzes the bifurcation structure corresponding to the fixed and periodic points of a coupled system comprising two Gaussian maps. The bifurcation structure of a mutually coupled Gaussian map is more complex than that of a mutually coupled logistic map. In a coupled Gaussian map, it was confirmed that after a stable fixed point or stable periodic points became unstable through the bifurcation, the points were able to recover their stability while the system parameters were changing. Moreover, we investigated a parameter region in which symmetric and asymmetric stable fixed points coexisted. Asymmetric unstable fixed point was generated by the [Formula: see text]-type branching of a symmetric stable fixed point. The stability of the unstable fixed point could be recovered through period-doubling and tangent bifurcations. Furthermore, a homoclinic structure related to the occurrence of chaotic behavior and invariant closed curves caused by two-periodic points was observed. The mutually coupled Gaussian map was merely a two-dimensional dynamical system; however, chaotic itinerancy, known to be a characteristic property associated with high-dimensional dynamical systems, was observed. The bifurcation structure of the mutually coupled Gaussian map clearly elucidates the mechanism of chaotic itinerancy generation in the two-dimensional coupled map. We discussed this mechanism by comparing the bifurcation structures of the Gaussian and logistic maps.


Author(s):  
Jingjun Lou ◽  
Shijian Zhu

In contrast to the unilateral claim in some papers that a positive Lyapunov exponent means chaos, it was claimed in this paper that this is just one of the three conditions that Lyapunov exponent should satisfy in a dissipative dynamical system when the chaotic motion appears. The other two conditions, any continuous dynamical system without a fixed point has at least one zero exponent, and any dissipative dynamical system has at least one negative exponent and the sum of all of the 1-dimensional Lyapunov exponents id negative, are also discussed. In order to verify the conclusion, a MATLAB scheme was developed for the computation of the 1-dimensional and 3-dimensional Lyapunov exponents of the Duffing system with square and cubic nonlinearity.


2003 ◽  
Vol 13 (11) ◽  
pp. 3325-3340 ◽  
Author(s):  
ANDREY L. SHILNIKOV ◽  
NIKOLAI F. RULKOV

Origin of chaos in a simple two-dimensional map model replicating the spiking and spiking-bursting activity of real biological neurons is studied. The map contains one fast and one slow variable. Individual dynamics of a fast subsystem of the map is characterized by two types of possible attractors: stable fixed point (replicating silence) and superstable limit cycle (replicating spikes). Coupling this subsystem with the slow subsystem leads to the generation of periodic or chaotic spiking-bursting behavior. We study the bifurcation scenarios which reveal the dynamical mechanisms that lead to chaos at alternating silence and spiking phases.


In this article, a class of Hindmarsh-Rose model is studied. First, all necessary conditions for the parameters of system are found in order to have one stable fixed point which presents the resting state for this famous model. After that, using the Hopf’s theorem proofs analytically the existence of a Hopf bifurcation, which is a critical point where a system’s stability switches and a periodic solution arises. More precisely, it is a local bifurcation in which a fixed point of a dynamical system loses stability, as a pair of complex conjugate eigenvalues cross the complex plane imaginary axis. Moreover, with the suitable assumptions for the dynamical system, a small-amplitude limit cycle branches from the fixed point


ROBOT ◽  
2010 ◽  
Vol 32 (4) ◽  
pp. 478-483 ◽  
Author(s):  
Xiuhua NI ◽  
Weishan CHEN ◽  
Junkao LIU ◽  
Shengjun SHI

2010 ◽  
Vol 24 (22) ◽  
pp. 4325-4331
Author(s):  
XING-YUAN WANG ◽  
JUN-MEI SONG

This paper studies the hyperchaotic Rössler system and the state observation problem of such a system being investigated. Based on the time-domain approach, a simple observer for the hyperchaotic Rössler system is proposed to guarantee the global exponential stability of the resulting error system. The scheme is easy to implement and different from the other observer design that it does not need to transmit all signals of the dynamical system. It is proved theoretically, and numerical simulations show the effectiveness of the scheme finally.


2013 ◽  
Vol 28 (14) ◽  
pp. 1350053 ◽  
Author(s):  
BRUCE L. SÁNCHEZ-VEGA ◽  
ILYA L. SHAPIRO

We start systematic investigation for the possibility to have supersymmetry (SUSY) as an asymptotic state of the gauge theory in the high energy (UV) limit, due to the renormalization group running of coupling constants of the theory. The answer on whether this situation takes place or not, can be resolved by dealing with the running of the ratios between Yukawa and scalar couplings to the gauge coupling. The behavior of these ratios does not depend too much on whether gauge coupling is asymptotically free (AF) or not. It can be shown that the UV stable fixed point for the Yukawa coupling is not supersymmetric. Taking this into account, one can break down SUSY only in the scalar coupling sector. We consider two simplest examples of such breaking, namely N = 1 supersymmetric QED and QCD. In one of the cases one can construct an example of SUSY being restored in the UV regime.


2019 ◽  
Vol 29 (4) ◽  
pp. 419-468
Author(s):  
Henning Basold ◽  
Helle Hvid Hansen

Abstract We define notions of well-definedness and observational equivalence for programs of mixed inductive and coinductive types. These notions are defined by means of tests formulas which combine structural congruence for inductive types and modal logic for coinductive types. Tests also correspond to certain evaluation contexts. We define a program to be well-defined if it is strongly normalizing under all tests, and two programs are observationally equivalent if they satisfy the same tests. We show that observational equivalence is sufficiently coarse to ensure that least and greatest fixed point types are initial algebras and final coalgebras, respectively. This yields inductive and coinductive proof principles for reasoning about program behaviour. On the other hand, we argue that observational equivalence does not identify too many terms, by showing that tests induce a topology that, on streams, coincides with usual topology induced by the prefix metric. As one would expect, observational equivalence is, in general, undecidable, but in order to develop some practically useful heuristics we provide coinductive techniques for establishing observational normalization and observational equivalence, along with up-to techniques for enhancing these methods.


1984 ◽  
Vol 246 (6) ◽  
pp. R928-R935 ◽  
Author(s):  
J. A. Kelso ◽  
B. Tuller

We suggest that a principled analysis of language and action should begin with an understanding of the rate-dependent, dynamical processes that underlie their implementation. Here we present a summary of our ongoing speech production research, which reveals some striking similarities with other work on limb movements. Four design themes emerge for articulatory systems: 1) they are functionally rather than anatomically specific in the way they work; 2) they exhibit equifinality and in doing so fall under the generic category of a dynamical system called point attractor; 3) across transformations they preserve a relationally invariant topology; and 4) this, combined with their stable cyclic nature, suggests that they can function as nonlinear, limit cycle oscillators (periodic attractors). This brief inventory of regularities, though not mean to be inclusive, hints strongly that speech and other movements share a common, dynamical mode of operation.


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