scholarly journals Phylogenetic relatedness as a tool in restoration ecology: a meta-analysis

2011 ◽  
Vol 279 (1734) ◽  
pp. 1761-1767 ◽  
Author(s):  
Miguel Verdú ◽  
Lorena Gómez-Aparicio ◽  
Alfonso Valiente-Banuet

Biotic interactions assembling plant communities can be positive (facilitation) or negative (competition) and operate simultaneously. Facilitative interactions and posterior competition are among the mechanisms triggering succession, thus representing a good scenario for ecological restoration. As distantly related species tend to have different phenotypes, and therefore different ecological requirements, they can coexist, maximizing facilitation and minimizing competition. We suggest including phylogenetic relatedness together with phenotypic information as a predictor for the net effects of the balance between facilitation and competition in nurse-based restoration experiments. We quantify, by means of a Bayesian meta-analysis of nurse-based restoration experiments performed worldwide, the importance of phylogenetic relatedness and life-form disparity in the survival, growth and density of facilitated plants. We find that the more similar the life forms of neighbouring plants are the greater the positive effect of phylogenetic distance is on survival and density. This result suggests that other characteristics beyond life form are also contained in the phylogeny, and the larger the phylogenetic distance, the less is the niche overlap, and therefore the less is the competition. As a general rule, we can maximize the success of the nurse-based practices by increasing life-form disparity and phylogenetic distances between the neighbour and the facilitated plant.

2008 ◽  
Vol 24 (2) ◽  
pp. 121-133 ◽  
Author(s):  
Satomi Shiodera ◽  
Joeni S. Rahajoe ◽  
Takashi Kohyama

Abstract:The relationship between leaf longevity and other leaf traits was compared among different life-form categories (trees, herbs, climbers and epiphytes) of 101 plant species in a tropical montane forest on Mt. Halimun, West Java, Indonesia. We applied the Cox proportional hazards regression to estimate the leaf longevity of each species from 30 mo of census data. We examined whether estimated longevity was explained by either species life-form categories, taxonomic groupings (eudicots, monocots, magnoliids and chloranthales, and ferns) or such leaf traits as leaf area, leaf mass per area (LMA), mass-based leaf nitrogen, penetrometer reading, condensed-tannin-free total phenolics and condensed tannin. There was a wide-ranged interspecific variation in leaf longevity, mostly 10–50 mo, similarly across life-form categories. LMA showed a strong positive influence on leaf longevity. We found that relationships between leaf longevity and some leaf traits were different among various life forms. Trees tended to have high LMA, while climbers tended to have low LMA at the same leaf longevity. We hypothesize that such difference among life forms reflects shoot architecture characteristics. Multi-shoot trees with branching architecture need to have self-supporting leaves, whereas semi-epiphytic climbers can maintain relatively low biomass investment to leaves hanging or relying upon the mechanical support from host plants.


2021 ◽  
Author(s):  
Michaeline B. N. Albright ◽  
Stilianos Louca ◽  
Daniel E. Winkler ◽  
Kelli L. Feeser ◽  
Sarah-Jane Haig ◽  
...  

AbstractMicrobiome engineering is increasingly being employed as a solution to challenges in health, agriculture, and climate. Often manipulation involves inoculation of new microbes designed to improve function into a preexisting microbial community. Despite, increased efforts in microbiome engineering inoculants frequently fail to establish and/or confer long-lasting modifications on ecosystem function. We posit that one underlying cause of these shortfalls is the failure to consider barriers to organism establishment. This is a key challenge and focus of macroecology research, specifically invasion biology and restoration ecology. We adopt a framework from invasion biology that summarizes establishment barriers in three categories: (1) propagule pressure, (2) environmental filtering, and (3) biotic interactions factors. We suggest that biotic interactions is the most neglected factor in microbiome engineering research, and we recommend a number of actions to accelerate engineering solutions.


Author(s):  
Pavlova N.R. ◽  
Dzerkal V.M. ◽  
Ponomareva А.А.

In order to preserve, reproduce and effectively use the natural complexes and objects of the DniproDelta as one of the most valuable natural floodplain-littoral complexes in Europe, which have special environmental, recreational, historical and cultural, scientific, educational and aesthetic value, and ensurethe conservationof «DniproDelta»wetland of theinternational importance,the National Natural Park «Lower Dnipro»was created(Decree of the President of Ukraine of November 24, 2015 No 657/2015).The flora of the higher vascular plants of the Park contains 820 species, 40 species of which (4.9% of the total number) are woody plants. Rosaceae Juss. (14 species), Salicaceae Mirb. (7 species), Aceraceae Juss. (3 types) are leading families of the dendroflora of the Park.Biomorphological characteristics of tree plant species in the flora of the Lower Dnipro National Nature Park were carried out according to the following classifications: 1) K. Raunkiersystem of plant life forms; 2) ecological and morphological classification of life forms of I. G. Serebryakov; 3) architectural models of F. Alle, R. Oldeman and P. Tomlinson; 4) classification of the life forms of plants of the temperate zone, which takes into account the vegetative propagation by O. V. Smirnova, L. B. Zaugolnova.AnalysisoftypesofbiomorphsaccordingtotheclassificationofK. Raunkiershowedthatthevastmajorityofdendrofloraspeciesbelongtophanerophytes, amongthem, dependingontheheightoftheplant, therearedifferentgroups-megaphanerophytes(e.g., Populustremula), mesophanerophytes(Salixalba), microphaneorphytes, nanophanerophytes(Amygdalusnana) andhamephytes(Ephedradistachia).According to the ecological and morphological classification of I. G. Serebryakov life forms, the flora of the Park is dominated by forest-steppe trees and forest-type trees.The trees which belong to one life form often differ in the principles of growth and formation of the crown, branching, and general habitus, which is generally considered as an architectural model of a particular species. According to the classification of architectural models by F. Alle, R. Oldeman and P. Tomlinson, in the flora of the Park, there are five models among which the species formed by the model of Tomlinson have a significant representation, and the species formed by the models of Manzheno and Champagne have a smaller representation.Key words:flora, tree, classification, life form, bush. З метою збереження, відтворення і ефективного використання природних комплексів та об’єктів дельти річки Дніпро як одного з найцінніших природних заплавно-літоральних комплексів у Європі, які мають особливу природоохоронну, оздоровчу, історико-культурну, наукову, освітню та естетичну цінність, забезпечення збереження водно-болотного угіддя міжнародного значення «Дельта р. Дніпро» створено Національний природний парк «Нижньодніпровський» (Указ президента України від 24 листопада 2015 року No 657/2015).Флора вищих судинних рослин Парку попередньо складає 820 видів, з них 40 видів (4,9% від загальної кількості) –деревні рослини.Провідні родини дендрофлори Парку –Rosaceae Juss. (14 видів), SalicaceaeMirb. (7 видів), AceraceaeJuss. (3 види). Біоморфологічну характеристику видів деревних рослин у флорі національного природнього парку «Нижньодніпровський» проведено за класифікаціями: 1) система життєвих форм рослин К. Раункієра; 2) еколого-морфологічна класифікація життєвих форм І. Г. Сєрєбрякова; 3) архітектурні моделі Ф. Аллє, Р. Ольдемана і П. Томлінсона; 4)класифікація життєвих форм рослин помірної зони, яка враховує вегетативне розмноження О. В. Смирнової, Л. Б. Заугольнової.Аналіз типів біоморф за класифікацією К. Раункієра показав, що переважна більшість видів дендрофлори належить до фанерофітів, серед них, в залежності від висоти рослини, виділяють різні групи –мегафанерофіти (наприклад, Populus tremula), мезофанерофіти (Salix alba), мікрофанерофіти (Amorpha fruticosa), нанофанерофіти (Amygdalus nana) та хамефіти (Ephedra distachia).За еколого-морфологічною класифікацією життєвих форм І. Г. Сєрєбрякова у флорі Парку домінують дерева лісостепового типу та дерева лісового типу.Дерева, які відносяться до однієї життєвої форми, часто відрізняютьсяпринципами наростання та формування крони, галуженням, загальним габітусом, що загалом розглядається як архітектурна модель конкретного виду. За класифікацією архітектурних моделей Ф.Аллє, Р. Ольдемана і П. Томлінсона у флорі Парку виділено п’ять моделей, серед яких, значне представництво мають види, що формуються за моделлю Томлінсона, менше представництво мають види, що формуються за моделями Манжено та Шампанії.Ключові слова: флора, дерево, класифікація, життєва форма, кущ.


2004 ◽  
Vol 64 (2) ◽  
pp. 201-209 ◽  
Author(s):  
M. A. Batalha ◽  
F. R. Martins

We used Raunkiaer's system to classify in life-forms the vascular plants present in 12 random 25 m² quadrats of a cerrado site. The study area is covered by cerrado sensu stricto and is located in the Valério fragment, at about 22º13'S and 47º51'W, 760 m above sea level, in the Itirapina Ecological and Experimental Station, São Paulo State, southeastern Brazil. The floristic spectrum considers the life-form of each species, while in the frequency spectrum, each species is weighted by its frequency. The vegetation spectrum does not consider the species at all, but only the individuals in each life-form class. In the floristic spectrum, the most represented life-forms were the phanerophytes and the hemicryptophytes, as in other cerrado sites. This spectrum differed significantly from Raunkiaer's normal spectrum, mainly due to under-representation of therophytes and over-representation of phanerophytes. The floristic and frequency spectra were similar, but both differed from the vegetation spectrum. We recommend the floristic spectrum when working at larger scales and a description of the phytoclimate is wanted. The vegetation spectrum is preferable when working at smaller scales and wanting a quantitative description of the physiognomy. The frequency spectrum is not recommended at all.


2021 ◽  
Author(s):  
Genda Singh ◽  
Bilas Singh

Abstract Background: Plants adapt to adverse environmental conditions accumulate varying concentrations of carbon (C), nitrogen (N) and sulfur (S) compounds to cope up with adverse climatic conditions. Carbon, N and S concentrations were determined in roots, stem and leaves of 33 species of trees/shrubs with objectives to observe the effects of life-form and plants functional traits, and select species with high concentration of these elements for their utilization in afforestation and medicinal uses. Results: Concentrations of C, N, and S and C: N and N: S ratio varied (P<0.05) between species, organs, life-forms and functional traits (legume vs non-legume). These variables were higher (except C in roots and stem) in trees than shrubs, and in leguminous than non-leguminous species. Non-leguminous species showed high S content and low N: S ratio. Antagonistic and synergistic relations were observed between C and N, and N and S concentration respectively. Species showed varying potential in assimilating carbon by regulating uptake and accumulation of these elements in different organs making them adapt to the habitats affected by drought and salinity. We observed strong plant size/life-form effects on C and N content and C: N and N: S ratios and of function on S content. Conclusions: Life-form/size and varying functions of the species determined C: nutrient ratio and elemental composition and helped adapting varying environmental stresses. This study assist in selecting species of high carbon, nitrogen and S content to utilize them in afforesting the areas affected by water and salt stresses, increased carbon storage and species with high S/N content in medicinal uses.


2020 ◽  
Vol 8 (6) ◽  
pp. 906 ◽  
Author(s):  
Francisco L. Massello ◽  
Chia Sing Chan ◽  
Kok-Gan Chan ◽  
Kian Mau Goh ◽  
Edgardo Donati ◽  
...  

The study of microbial communities from extreme environments is a fascinating topic. With every study, biologists and ecologists reveal interesting facts and questions that dispel the old belief that these are inhospitable environments. In this work, we assess the microbial diversity of three hot springs from Neuquén, Argentina, using high-throughput amplicon sequencing. We predicted a distinct metabolic profile in the acidic and the circumneutral samples, with the first ones being dominated by chemolithotrophs and the second ones by chemoheterotrophs. Then, we collected data of the microbial communities of hot springs around the world in an effort to comprehend the roles of pH and temperature as shaping factors. Interestingly, there was a covariation between both parameters and the phylogenetic distance between communities; however, neither of them could explain much of the microbial profile in an ordination model. Moreover, there was no correlation between alpha diversity and these parameters. Therefore, the microbial communities’ profile seemed to have complex shaping factors beyond pH and temperature. Lastly, we looked for taxa associated with different environmental conditions. Several such taxa were found. For example, Hydrogenobaculum was frequently present in acidic springs, as was the Sulfolobaceae family; on the other hand, Candidatus Hydrothermae phylum was strongly associated with circumneutral conditions. Interestingly, some singularities related to sites featuring certain taxa were also observed.


2019 ◽  
Vol 190 (4) ◽  
pp. 333-344 ◽  
Author(s):  
Hong Qian ◽  
Brody Sandel ◽  
Tao Deng ◽  
Ole R Vetaas

AbstractEcologists have embraced phylogenetic measures of assemblage structure, in large part for the promise of better mechanistic inferences. However, phylogenetic structure is driven by a wide array of factors from local biotic interactions to biogeographical history, complicating the mechanistic interpretation of a pattern. This may be particularly problematic along elevational gradients, where rapidly changing physical and biological conditions overlap with geological and biogeographical history, potentially producing complex patterns of phylogenetic dispersion (relatedness). We focus on the longest elevational gradient of vegetation in the world (i.e. c. 6000 m in Nepal) to explore patterns of phylogenetic dispersion for angiosperms (flowering plants) along this elevational gradient. We used the net relatedness index to quantify phylogenetic dispersion for each elevational band of 100 m. We found a zig-zag pattern of phylogenetic dispersion along this elevational gradient. With increasing elevation, the phylogenetic relatedness of species decreased for the elevational segment between 0 and c. 2100 m, increased for the elevational segment between 2100 and c. 4200 m, and decreased for the elevational segment above c. 4200 m. We consider this pattern to be a result of the interaction of geophysical (e.g. plate tectonics) and eco-evolutionary processes (e.g. niche conservatism and trait convergence). We speculate on the mechanisms that might have generated this zig-zag pattern of phylogenetic dispersion.


mBio ◽  
2019 ◽  
Vol 10 (5) ◽  
Author(s):  
Lokeshwaran Manoharan ◽  
Jessica A. Kozlowski ◽  
Robert W. Murdoch ◽  
Frank E. Löffler ◽  
Filipa L. Sousa ◽  
...  

ABSTRACT The genomes of Asgard Archaea, a novel archaeal proposed superphylum, share an enriched repertoire of eukaryotic signature genes and thus promise to provide insights into early eukaryote evolution. However, the distribution, metabolisms, cellular structures, and ecology of the members within this superphylum are not well understood. Here we provide a meta-analysis of the environmental distribution of the Asgard archaea, based on available 16S rRNA gene sequences. Metagenome sequencing of samples from a salt-crusted lagoon on the Baja California Peninsula of Mexico allowed the assembly of a new Thorarchaeota and three Lokiarchaeota genomes. Comparative analyses of all known Lokiarchaeota and Thorarchaeota genomes revealed overlapping genome content, including central carbon metabolism. Members of both groups contained putative reductive dehalogenase genes, suggesting that these organisms might be able to metabolize halogenated organic compounds. Unlike the first report on Lokiarchaeota, we identified genes encoding glycerol-1-phosphate dehydrogenase in all Loki- and Thorarchaeota genomes, suggesting that these organisms are able to synthesize bona fide archaeal lipids with their characteristic glycerol stereochemistry. IMPORTANCE Microorganisms of the superphylum Asgard Archaea are considered to be the closest living prokaryotic relatives of eukaryotes (including plants and animals) and thus promise to give insights into the early evolution of more complex life forms. However, very little is known about their biology as none of the organisms has yet been cultivated in the laboratory. Here we report on the ecological distribution of Asgard Archaea and on four newly sequenced genomes of the Lokiarchaeota and Thorarchaeota lineages that give insight into possible metabolic features that might eventually help to identify these enigmatic groups of archaea in the environment and to culture them.


2018 ◽  
Vol 96 (1) ◽  
pp. 138 ◽  
Author(s):  
Tatiana Lobato-de Magalhães ◽  
Mahinda Martínez

<p><strong>Background: </strong>Mexico has a high diversity of aquatic and subaquatic plants that occur between 1,000 and 2,500 m of elevation, although a larger proportion of aquatic plants is concentrated at lower altitudes. Temporary wetlands harbor close to 73 % of the aquatic species in Mexico. These systems are under a strong anthropogenic pressure and suffer constant degradation.</p><p><strong>Questions:</strong> i) How many species grow in highland temporary wetlands? ii) Are they floristically similar? iii) Is there a latitudinal pattern of species richness?</p><p><strong>Studied groups: </strong>Charophyta, Pteridophyta, Angiosperms.</p><p><strong>Study site and years of study:</strong> Central Mexico (39 wetlands) from 2015 to 2016.<strong></strong></p><p><strong>Methods: </strong>We collected in 39 temporary wetlands for two years. We made a presence/absence list of species per locality, and calculated floristic similarities and correlations between wetlands. We include data characterizing life form, plant use, and conservation status.</p><p><strong>Results:</strong> We found 126 species belonging to 80 genera and 38 families. The richest families were Cyperaceae, Asteraceae, and Poaceae. As to genera, <em>Eleocharis</em>, <em>Cyperus</em>, and <em>Juncus </em>had more species. Species with the widest distributions were <em>Persicaria mexicana</em>, <em>Marsilea mollis</em>, <em>Luziola fluitans</em>, <em>Heteranthera peduncularis</em>, and <em>Nymphoides fallax</em>.  We found five different life forms – all herbaceous, including 27 threatened species, 24 species with economic use, 48 endemic species, and 19 cosmopolitan species. In addition, we found 20 species recorded for the first time in some states included in our study, and two species of <em>Eleocharis</em> that might represent undescribed species. The richest wetland harbors 40 species, the poorest has only five. Wetlands were comparable to each other in species composition, and species richness increases towards the south.</p><p><strong>Conclusions:</strong> Temporary wetlands harbor a high floristic diversity and are similar to each other. Lower latitudes host higher numbers of species.</p>


Sign in / Sign up

Export Citation Format

Share Document