Discovery and characterization of a novel insect-specific reovirus isolated from Psammotettix alienus

A novel double-stranded RNA (dsRNA) virus designated Psammotettix alienus reovirus (PARV) was found in the leafhopper Psammotettix alienus in China. Spherical particles approximately 70 nm in diameter arranged in a crystalline array were observed in the salivary gland tissues of infected leafhoppers by transmission electron microscopy. Some viral particles were also encased in tubules, similar to those of previously described reoviruses. Whole-genome sequencing revealed that the dsRNA genome of PARV consists of 29 569 nucleotides (nt) divided into 10 segments ranging from 4403 to 1476 nt, with low G+C content (29.5–36.5 %). All segments contained conserved terminal sequences (5′AAC…GUCA3′) and specific panhandle structures formed by inverted terminal repeats in the noncoding regions. Phylogenetic analysis based on the deduced RNA-dependent RNA polymerase (RdRp) revealed that PARV was in the fijivirus clade, but in a monophyletic lineage with an unassigned insect reovirus (Hubei insect virus 2, HBIV-2), although PARV and HBIV-2 are distinct enough to represent a new group within the genus Fijivirus. Biological assays showed that PARV infects P. alienus but not wheat plants, implying that it is a new insect-specific reovirus in the leafhopper. Given these features, PARV should be considered as a new species in the genus Fijivirus, family Reoviridae.

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Characterization of a novel alloherpesvirus from Atlantic cod (Gadus morhua)

Journal of Veterinary Diagnostic Investigation ◽

10.1177/1040638711416629 ◽

2011 ◽

Vol 24 (1) ◽

pp. 65-73 ◽

Cited By ~ 9

Author(s):

Mar Marcos-Lopez ◽

Thomas B. Waltzek ◽

Ronald P. Hedrick ◽

Dolores V. Baxa ◽

Amber F. Garber ◽

...

Keyword(s):

Gadus Morhua ◽

Virus Isolation ◽

Atlantic Cod ◽

International Committee ◽

Atpase Subunit ◽

Transmission Electron ◽

Viral Particles ◽

Infected Cells

Alloherpesviruses affect freshwater and marine fish species. The aim of the current study was to characterize a novel alloherpesvirus in Atlantic cod ( Gadus morhua). Samples were processed for histopathology, transmission electron microscopy (TEM), virus isolation, molecular characterization, and in situ hybridization (ISH). Histopathology revealed that the infection was restricted to the gills and that it induced cytomegaly in infected cells. By TEM, numerous viral particles with morphology compatible with a herpesvirus were observed inside the cytomegalic cells. To characterize this new agent, polymerase chain reaction amplified regions of the ATPase subunit of the terminase, and DNA polymerase genes were sequenced. Phylogenetic analysis revealed strongest similarity with alloherpesviruses belonging to the genus Ictalurivirus and Salmonivirus. The ISH showed specific labeling of nuclear inclusions in the cytomegalic cells. While virus isolation was unsuccessful, the results obtained through different diagnostic tests in the present study confirm the discovery of a new alloherpesvirus affecting Atlantic cod. The authors propose the formal species designation Gadid herpesvirus 1 (GaHV-1) to be considered for approval by the International Committee on the Taxonomy of Viruses.

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Characterization of a Novel Mitovirus Infecting Melanconiella theae Isolated From Tea Plants

Frontiers in Microbiology ◽

10.3389/fmicb.2021.757556 ◽

2021 ◽

Vol 12 ◽

Author(s):

Karim Shafik ◽

Muhammad Umer ◽

Huafeng You ◽

Hamdy Aboushedida ◽

Zhenhua Wang ◽

...

Keyword(s):

Genomic Sequence ◽

Dsrna Segment ◽

Rna Dependent Rna Polymerase ◽

Stem Loop ◽

Transmission Electron ◽

The Family ◽

Dsrna Genome ◽

Tea Plants ◽

Rich Content

A dsRNA segment was identified in the fungus Melanconiella theae isolated from tea plants. The complete dsRNA sequence, determined by random cloning together with RACE protocol, is 2,461 bp in length with an AU-rich content (62.37%) and comprises a single ORF of 2,265-nucleotides encoding an RNA-dependent RNA-polymerase (RdRp, 754 amino acids in size). The terminus sequences can fold into predicted stable stem-loop structures. A BLASTX and phylogenetic analysis revealed the dsRNA genome shows similarities with the RdRp sequences of mitoviruses, with the highest identity of 48% with those of grapevine-associated mitovirus 20 and Colletotrichum fructicola mitovirus 1. Our results reveal a novel member, tentatively named Melanconiella theae mitovirus 1 (MtMV1), belongs to the family Mitoviridae. MtMV1 is capsidless as examined by transmission electron microscope, efficiently transmitted through conidia as 100 conidium-generated colonies were analyzed, and easily eliminated by hyphal tipping method combined with green-leaf tea powder. MtMV1 has a genomic sequence obviously divergent from those of most members in the family Mitoviridae and some unique characteristics unreported in known members. This is the first report of a mycovirus infecting Melanconiella fungi to date.

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PREPARATION AND CHARACTERIZATION OF AMINO-MODIFIED Fe3O4 MAGNETIC NANOCOMPOSITE PARTICLES BY ONE-STEP GLYCOTHERMAL METHOD

Modern Physics Letters B ◽

10.1142/s0217984913410029 ◽

2013 ◽

Vol 27 (19) ◽

pp. 1341002 ◽

Cited By ~ 2

Author(s):

YUHONG ZHANG ◽

BIAO YAN ◽

TAIGANG SHI

Keyword(s):

Iron Oxide ◽

Average Diameter ◽

Magnetic Nanocomposite ◽

Spherical Particles ◽

X Ray Diffraction ◽

Nanocomposite Particles ◽

Glycothermal Method ◽

Transmission Electron ◽

One Step

Amino-modified Fe 3 O 4 magnetic nanocomposite particles were prepared by one-step glycothermal method. The shape and morphology of Fe 3 O 4 particles change when a small amount of water is added as a co-solvent in the glycothermal method. The morphology and structure of the sample were characterized and measured by transmission electron microscopy (TEM), X-ray diffraction (XRD) and Fourier transform infrared (FTIR) spectroscopy. TEM images show that the morphology of the samples is from irregular polyhedron to spherical particles. Average diameter of particles is approximately 70/40/10 nm and more evenly distributed. XRD results show that the samples are cubic spinel structure. FTIR results show that a chemical bonds combination exists between the amino and iron oxide, nano-iron oxide are modified by the amino.

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Morphology and molecular description of Wilmottia koreana sp. nov. (Oscillatoriales, Cyanobacteria) isolated from the Republic of Korea

Phytotaxa ◽

10.11646/phytotaxa.447.4.2 ◽

2020 ◽

Vol 447 (4) ◽

pp. 237-251

Author(s):

NAM-JU LEE ◽

YOSEPH SEO ◽

JANG-SEU KI ◽

OK-MIN LEE

Keyword(s):

New Species ◽

Phylogenetic Analyses ◽

Genetic Distances ◽

Republic Of Korea ◽

Tree Bark ◽

Transmission Electron ◽

Monophyletic Lineage ◽

The Republic ◽

Taxonomic Groups ◽

A New Species

Two types of Wilmottia (Cyanobacteria) were collected from the tree-bark of a tree on Mt. Gwanggyo in Suwon City, Gyeonggi-do and a rock wall of Haje Port, Geum River in Jeollabuk-do, Republic of Korea. Morphological observations using light microscopy (LM) and transmission electron microscopy (TEM) revealed that one species was Wilmottia murrayi (Coleofasciculaceae, Oscillatoriales) and the other had similar morphology to W. murrayi, with considerable genetic variations, and thus, it was described as a new species named Wilmottia koreana. Phylogenetic analyses of the 16S rRNA revealed that the family Coleofasciculaceae was clearly separated into taxonomic groups of each genus, and in them, Wilmottia forms a monophyletic lineage. W. koreana diverged the earliest, forming a unique clade separate from the others. Statistical analyses showed that the inter-species genetic distances of Wilmottia were significantly different from the intra-species distances (t-test, P < 0.001). Additionally, the secondary structures of D1–D1’, Box-B, and the V3 helices were different among the Wilmottia species. These results demonstrated that the proposed new Wilmottia species was unique in molecular traits. Therefore, we propose this to be a new species belonging to the genus Wilmottia with the name Wilmottia koreana sp. nov.

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Synthesis and Characterization of ZnO Nanoparticles

MRS Proceedings ◽

10.1557/proc-829-b2.27 ◽

2004 ◽

Vol 829 ◽

Cited By ~ 2

Author(s):

I. U. Abhulimen ◽

X. B. Chen ◽

J. L. Morrison ◽

V. K. Rangari ◽

L. Bergman ◽

...

Keyword(s):

Blue Shift ◽

Acoustic Cavitation ◽

Spherical Particles ◽

Synthesis And Characterization ◽

Electrical Measurements ◽

Cavitation Phenomenon ◽

Transmission Electron ◽

Significant Blue Shift ◽

Scanning Electron

ABSTRACTNanoparticles of ZnO were synthesized using a sonochemical technique. Sonochemistry arises from an acoustic cavitation phenomenon, that is, the formation, growth and implosive collapse of bubbles in a liquid medium. The ultraviolet photoluminescence (PL) studies of the samples showed a strong PL intensity and a significant blue shift relative to the PL of the bulk. Shifts up to 70 meV were observed and attributed to a confinement effect. Scanning electron microscopy indicated roughly spherical particles, ∼160 nm in diameter. However, nano-platelets and rods were observed in transmission electron micrographs. Preliminary electrical measurements indicated a highly resistive nature of the nanoparticulate material.

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The Use of Advanced Analytical Techniques for Characterization of the Chemical, Physical, and Crystallographic Nature of a Surface

Proceedings, annual meeting, Electron Microscopy Society of America ◽

10.1017/s0424820100071107 ◽

1973 ◽

Vol 31 ◽

pp. 132-133 ◽

Cited By ~ 1

Author(s):

R. E. Herfert

Keyword(s):

Surface Characterization ◽

Analytical Techniques ◽

X Ray Diffraction ◽

Depth Of Penetration ◽

X Ray ◽

The Past ◽

Transmission Electron ◽

Scanning Electron

Studies of the nature of a surface, either metallic or nonmetallic, in the past, have been limited to the instrumentation available for these measurements. In the past, optical microscopy, replica transmission electron microscopy, electron or X-ray diffraction and optical or X-ray spectroscopy have provided the means of surface characterization. Actually, some of these techniques are not purely surface; the depth of penetration may be a few thousands of an inch. Within the last five years, instrumentation has been made available which now makes it practical for use to study the outer few 100A of layers and characterize it completely from a chemical, physical, and crystallographic standpoint. The scanning electron microscope (SEM) provides a means of viewing the surface of a material in situ to magnifications as high as 250,000X.

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An Electron Microscope Study of Interdiffusion and Compound Formation in Ta-Au Thin Films

Proceedings, annual meeting, Electron Microscopy Society of America ◽

10.1017/s0424820100070606 ◽

1973 ◽

Vol 31 ◽

pp. 32-33 ◽

Cited By ~ 1

Author(s):

T. C. Tisone ◽

S. Lau

Keyword(s):

Electron Microscope ◽

Electron Microscope Study ◽

Thermally Grown Oxide ◽

Ion Milling ◽

Compound Formation ◽

Technology Application ◽

Transmission Electron ◽

Before And After ◽

Au Thin Films

In a study of the properties of a Ta-Au metallization system for thin film technology application, the interdiffusion between Ta(bcc)-Au, βTa-Au and Ta2M-Au films was studied. Considered here is a discussion of the use of the transmission electron microscope(TEM) in the identification of phases formed and characterization of the film microstructures before and after annealing.The films were deposited by sputtering onto silicon wafers with 5000 Å of thermally grown oxide. The film thicknesses were 2000 Å of Ta and 2000 Å of Au. Samples for TEM observation were prepared by ultrasonically cutting 3mm disks from the wafers. The disks were first chemically etched from the silicon side using a HNO3 :HF(19:5) solution followed by ion milling to perforation of the Au side.

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Characterization of RF Sputtered ZnO Piezoelectric Films Using Transmission Electron Microscope

Proceedings, annual meeting, Electron Microscopy Society of America ◽

10.1017/s0424820100114050 ◽

1975 ◽

Vol 33 ◽

pp. 86-87

Author(s):

Kemining W. Yeh ◽

Richard S. Muller ◽

Wei-Kuo Wu ◽

Jack Washburn

Keyword(s):

Integrated Circuit ◽

Acoustic Waves ◽

New Technology ◽

Surface Acoustic Waves ◽

Electromechanical Properties ◽

Leading Role ◽

Saw Devices ◽

Transmission Electron ◽

High Degree

Considerable and continuing interest has been shown in the thin film transducer fabrication for surface acoustic waves (SAW) in the past few years. Due to the high degree of miniaturization, compatibility with silicon integrated circuit technology, simplicity and ease of design, this new technology has played an important role in the design of new devices for communications and signal processing. Among the commonly used piezoelectric thin films, ZnO generally yields superior electromechanical properties and is expected to play a leading role in the development of SAW devices.

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Cryomicroscopy of multiphase latices

Proceedings, annual meeting, Electron Microscopy Society of America ◽

10.1017/s0424820100089615 ◽

1991 ◽

Vol 49 ◽

pp. 1060-1061

Author(s):

O. L. Shaffer ◽

M.S. El-Aasser ◽

C. L. Zhao ◽

M. A. Winnik ◽

R. R. Shivers

Keyword(s):

Electron Microscopy ◽

Radiation Damage ◽

Freeze Fracture ◽

Particle Morphology ◽

Second Stage ◽

Transmission Electron ◽

Important Approach ◽

Carbon Coated ◽

Preparation Techniques

Transmission electron microscopy is an important approach to the characterization of the morphology of multiphase latices. Various sample preparation techniques have been applied to multiphase latices such as OsO4, RuO4 and CsOH stains to distinguish the polymer phases or domains. Radiation damage by an electron beam of latices imbedded in ice has also been used as a technique to study particle morphology. Further studies have been developed in the use of freeze-fracture and the effect of differential radiation damage at liquid nitrogen temperatures of the latex particles embedded in ice and not embedded.Two different series of two-stage latices were prepared with (1) a poly(methyl methacrylate) (PMMA) seed and poly(styrene) (PS) second stage; (2) a PS seed and PMMA second stage. Both series have varying amounts of second-stage monomer which was added to the seed latex semicontinuously. A drop of diluted latex was placed on a 200-mesh Formvar-carbon coated copper grid.

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Applications of Transmission Electron Microscopy in the Characterization of Metal Machinability

Proceedings, annual meeting, Electron Microscopy Society of America ◽

10.1017/s0424820100101967 ◽

1968 ◽

Vol 26 ◽

pp. 442-443 ◽

Cited By ~ 1

Author(s):

L.E. Murr ◽

A.B. Draper

Keyword(s):

Electron Microscopy ◽

State Physics ◽

Test Material ◽

Milling Machine ◽

Rotary Table ◽

Solid State Physics ◽

Materials Properties ◽

Transmission Electron ◽

Selection Of

The industrial characterization of the machinability of metals and alloys has always been a very arbitrarily defined property, subject to the selection of various reference or test materials; and the adoption of rather naive and misleading interpretations and standards. However, it seems reasonable to assume that with the present state of knowledge of materials properties, and the current theories of solid state physics, more basic guidelines for machinability characterization might be established on the basis of the residual machined microstructures. This approach was originally pursued by Draper; and our presentation here will simply reflect an exposition and extension of this research.The technique consists initially in the production of machined chips of a desired test material on a horizontal milling machine with the workpiece (specimen) mounted on a rotary table vice. A single cut of a specified depth is taken from the workpiece (0.25 in. wide) each at a new tool location.

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