scholarly journals Allochronic Divergence Driven by Spatial Asynchrony in Precipitation in Neotropical Frogs?

2020 ◽  
Author(s):  
Carlos E. Guarnizo ◽  
Paola Montoya ◽  
Ignacio Quintero ◽  
Carlos Daniel Cadena
Keyword(s):  
Species Richness ◽  
Genetic Divergence ◽  
Meta Analysis ◽  
Population Divergence ◽  
Ecological Connectivity ◽  
Geographical Patterns ◽  
Geographic Barriers ◽  
Precipitation Regimes ◽  
Species Effect ◽  
Speciation Rates

AbstractThe role of geographic barriers in promoting reproductive isolation across space is well understood. Isolation by the time of breeding, however, may also promote population divergence when populations reproduce asynchronically in space, even in the absence of geographic barriers. Few examples exist of divergence due to breeding allochrony, particularly in vertebrates. We tested whether in Neotropical frogs’ asynchrony in precipitation patterns promotes intraspecific genetic divergence, speciation, and regional accumulation of diversity. We assessed the relationship between spatial asynchrony in precipitation and genetic divergence controlling for ecological connectivity across 48 Neotropical frog species. In addition, we examined whether regions within which precipitation regimes are more asynchronous across space have higher species richness and have experienced greater speciation rates. Beyond a generalized expected effect of ecological connectivity on intraspecific genetic divergence, we found that asynchrony in precipitation is positively associated with genetic differentiation in 31% of the species tested, resulting in a significantly positive cross-species effect of asynchrony in precipitation on genetic divergence in a meta-analysis. However, the effect of asynchrony in precipitation on population divergence seems not to scale to macroevolutionary patterns because spatial asynchrony in precipitation was not associated with geographical patterns of species richness or speciation rates. Our results indicate that genetic divergence can be promoted by asynchronous breeding lag in the absence of geographic barriers in species where breeding is associated with water availability, but such effects may not be stable enough through time to influence macroevolutionary patterns.

scholarly journals Population divergence in plant species reflects latitudinal biodiversity gradients

2008 ◽  
Vol 4 (4) ◽  
pp. 382-384 ◽  
Author(s):  
Soo Hyung Eo ◽  
John P Wares ◽  
John P Carroll
Keyword(s):  
Species Richness ◽  
Plant Species ◽  
Population Level ◽  
Plant Species Richness ◽  
Population Divergence ◽  
Genetic Population ◽  
Global Pattern ◽  
Spatial Design ◽  
Extant Species ◽  
Speciation Rates

The trend for increasing biodiversity from the poles to the tropics is one of the best-known patterns in nature. This latitudinal biodiversity gradient has primarily been documented so far with extant species as the measure of biodiversity. Here, we evaluate the global pattern in biodiversity across latitudes based on the magnitude of genetic population divergence within plant species, using a robust spatial design to compare published allozyme datasets. Like the pattern of plant species richness across latitudes, we expected the divergence among populations of current plant species would have a similar pattern and direction. We found that lower latitudinal populations showed greater genetic differentiation within species after controlling for geographical distance. Our analyses are consistent with previous population-level studies in animals, suggesting a high possibility of tropical peaks in speciation rates associated with observed levels of species richness.

scholarly journals Meta-analysis of cyathostomin species-specific prevalence and relative abundance in domestic horses from 1975–2020: emphasis on geographical region and specimen collection method

2020 ◽  
Vol 13 (1) ◽  
Author(s):  
Jennifer L. Bellaw ◽  
Martin K. Nielsen
Keyword(s):  
Species Richness ◽  
North America ◽  
Eastern Europe ◽  
Relative Abundance ◽  
Linear Models ◽  
Meta Analysis ◽  
Geographical Region ◽  
Mixed Linear Models ◽  
Collection Method ◽  
Species Specific

Abstract Background Cyathostomins infect virtually all horses, and concomitant infections with 10 or more species per horse is standard. Species-specific knowledge is limited, despite potential species bias in development of disease and anthelmintic resistance. This is the first meta-analysis to examine effects of geographical region and cyathostomin collection method on reported composition of cyathostomin communities. Methods Thirty-seven articles published in English in 1975 or later, in which adults of individual species were systematically enumerated, were included. Seven regions; North America, South America, eastern Europe, western Europe, northern Europe, southern Africa, and Oceania, and three cyathostomin collection methods; (i) standard necropsy recovery from the large intestine, (ii) critical test collection from post-treatment feces and necropsy, and (iii) diagnostic deworming recovery solely from post-treatment feces, were considered. Generalized mixed linear models analyzed the effects of region and collection method on species-specific prevalence and relative abundance. Species richness was analyzed by mixed linear models. Results Definitively, the most prevalent and relatively abundant species were Cylicocyclus nassatus (prevalence = 93%, relative abundance = 20%), Cylicostephanus (Cys.) longibursatus (93%, 20%), and Cyathostomum catinatum (90%, 16%). A bias toward horses with high infection intensities and cyathostomin collection from feces resulted in North American critical tests and eastern European diagnostic deworming overestimating the species-specific prevalence and underestimating the relative abundance of rare/uncommon species compared to respective intra-regional standard necropsies. North American critical tests underestimated species richness due partially to identification key errors. Inter-regional standard necropsy comparisons yielded some species-specific regional differences, including a significantly higher Cys. longibursatus prevalence and relative abundance in North America (92%, 33%) than in eastern Europe (51%, 7%) (P > 0.0001). Localization of critical tests to North America and diagnostic deworming to Eastern Europe precluded expansive ‘region by collection method’ interaction analyses. Conclusion We provide substantial data to inform study design, e.g. effect and study size, for cyathostomin research and highlight necessity for method standardization and raw data accessibility for optimal post-factum comparisons.

What is the form of the productivity–animal-species-richness relationship? A critical review and meta-analysis

Ecology ◽  
2012 ◽  
Vol 93 (10) ◽  
pp. 2241-2252 ◽  
Author(s):  
Jarrod Cusens ◽  
Shane D. Wright ◽  
Paul D. McBride ◽  
Len N. Gillman
Keyword(s):  
Species Richness ◽  
Critical Review ◽  
Animal Species ◽  
Meta Analysis

scholarly journals Evolutionary rates of mitochondrial genomes correspond to diversification rates and to contemporary species richness in birds and reptiles

2010 ◽  
Vol 277 (1700) ◽  
pp. 3587-3592 ◽  
Author(s):  
Soo Hyung Eo ◽  
J. Andrew DeWoody
Keyword(s):  
Species Richness ◽  
Nuclear Data ◽  
Synonymous Substitution ◽  
Evolutionary Rates ◽  
Rate Variation ◽  
Substitution Rates ◽  
Diversification Rates ◽  
Extinction Process ◽  
Molecular Evolutionary Rates ◽  
Speciation Rates

Rates of biological diversification should ultimately correspond to rates of genome evolution. Recent studies have compared diversification rates with phylogenetic branch lengths, but incomplete phylogenies hamper such analyses for many taxa. Herein, we use pairwise comparisons of confamilial sauropsid (bird and reptile) mitochondrial DNA (mtDNA) genome sequences to estimate substitution rates. These molecular evolutionary rates are considered in light of the age and species richness of each taxonomic family, using a random-walk speciation–extinction process to estimate rates of diversification. We find the molecular clock ticks at disparate rates in different families and at different genes. For example, evolutionary rates are relatively fast in snakes and lizards, intermediate in crocodilians and slow in turtles and birds. There was also rate variation across genes, where non-synonymous substitution rates were fastest at ATP8 and slowest at CO 3. Family-by-gene interactions were significant, indicating that local clocks vary substantially among sauropsids. Most importantly, we find evidence that mitochondrial genome evolutionary rates are positively correlated with speciation rates and with contemporary species richness. Nuclear sequences are poorly represented among reptiles, but the correlation between rates of molecular evolution and species diversification also extends to 18 avian nuclear genes we tested. Thus, the nuclear data buttress our mtDNA findings.

Impacts of nitrogen deposition on terrestrial plant diversity: a meta-analysis in China

2019 ◽  
Vol 12 (6) ◽  
pp. 1025-1033 ◽  
Author(s):  
Wen-Juan Han ◽  
Jia-Yu Cao ◽  
Jin-Liang Liu ◽  
Jia Jiang ◽  
Jian Ni
Keyword(s):  
Species Richness ◽  
Plant Diversity ◽  
Meta Analysis ◽  
N Deposition ◽  
Shannon Index ◽  
N Addition ◽  
Terrestrial Plant ◽  
Multiple Dimensions ◽  
Negative Effect ◽  
Experiment Duration

AbstractAimsWith the global atmospheric nitrogen (N) deposition increasing, the effect of N deposition on terrestrial plant diversity has been widely studied. Some studies have reviewed the effects of N deposition on plant species diversity; however, all studies addressed the effects of N deposition on plant community focused on species richness in specific ecosystem. There is a need for a systematic meta-analysis covering multiple dimensions of plant diversity in multiple climate zones and ecosystems types. Our goal was to quantify changes in species richness, evenness and uncertainty in plant communities in response to N addition across different environmental and experimental contexts.MethodsWe performed a meta-analysis of 623 experimental records published in English and Chinese journals to evaluate the response of terrestrial plant diversity to the experimental N addition in China. Three metrics were used to quantify the change in plant diversity: species richness (SR), evenness (Pielou index) uncertainty (Shannon index).Important FindingsResults showed that (i) N addition negatively affected SR in temperate, Plateau zones and subtropical zone, but had no significant effect on Shannon index in subtropical zones; (ii) N addition decreased SR, Shannon index and Pielou index in grassland, and the negative effect of N addition on SR was stronger in forest than in grassland; (iii) N addition negatively affected plant diversity (SR, Shannon index and Pielou index) in the long term, whereas it did not affect plant diversity in the short term. Furthermore, the increase in N addition levels strengthened the negative effect of N deposition on plant diversity with long experiment duration; and (iv) the negative effect of ammonium nitrate (NH4NO3) addition on SR was stronger than that of urea (CO(NH2)2) addition, but the negative effect of NH4NO3 addition on Pielou index was weaker than that of CO(NH2)2 addition. Our results indicated that the effects of N addition on plant diversity varied depending on climate zones, ecosystem types, N addition levels, N type and experiment duration. This underlines the importance of integrating multiple dimensions of plant diversity and multiple factors into assessments of plant diversity to global environmental change.

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