scholarly journals Characterization of a Novel Type Homoserine Dehydrogenase Only with High Oxidation Activity from Arthrobacter nicotinovorans

2021 ◽  
Author(s):  
Xinxin Liang ◽  
Huaxiang Deng ◽  
Yajun Bai ◽  
Tai-Ping Fan ◽  
Xiaohui Zheng ◽  
...  

AbstractHomoserine dehydrogenase (HSD) is a key enzyme in the synthesis pathway of the aspartate family of amino acids. HSD can catalyze the reversible reaction of L-aspartate-β-semialdehyde (L-ASA) to L-homoserine (L-Hse). In direct contrast, growth characteristic studies of some bacterial such as Arthrobacter nicotinovorans showed that the bacterium could grow well in medium with L-homoserine as sole carbon, nitrogen and energy source, but the genes responsible for the degradation of L-Hse remain unknown. Based on the function and sequence analysis of HSD, one putative homoserine dehydrogenase from A.nicotinovorans was named AnHSD, which was different from those HSDs that from the aspartic acid metabolic pathway, might be responsible for the degradation of L-Hse. Surprisingly, the analysis showed that the purified AnHSD exhibited specific L-Hse oxidation activity without reducing activity. At pH 10.0 and 40 °C, The Km and Kcat of AnHSD was 6.30 ± 1.03 mM and 462.71 s-1, respectively. AnHSD was partiality for NAD+ cofactor, as well as insensitive to feedback inhibition of downstream amino acids of aspartic acid family. The physiological role of AnHSD in A.nicotinovorans is discussed. These findings provide a novel insight for a better understanding of an alternative genetic pathway for L-Hse catabolism which was dominated by the novel HSD.ImportanceL-homoserine is an important building block for the synthesis of L-threonine, L-methionine, L-lysine which from aspartic acid family amino acids. However, some bacteria can make use of L-homoserine as a sole carbon and nitrogen source. Although the microbial degradation of L-homoserine has been studied several times, the genes involved and the molecular mechanisms remain unclear. In this study, we show that AnHSD responsible for the catabolism of L-homoserine in strain Arthrobacter nicotinovorans, as a special homoserine dehydrogenase with high diversity exists in Arthrobacter, Microbacterium, Rhizobium. We report for the first time that this novel homoserine dehydrogenase is now proposed to play a crucial role in that L-homoserine can use as a sole carbon and nitrogen source. This study is aimed at elucidating the enzymatic properties and function features of homoserine dehydrogenase from Arthrobacter nicotinovorans. These findings provide new insight into the catabolism of L-homoserine in bacteria.

2021 ◽  
Author(s):  
Jin-Tian Ma ◽  
Li-Sheng Wang ◽  
Zhi Chai ◽  
Xin-Feng Chen ◽  
Bo-Cheng Tang ◽  
...  

Quinazoline skeletons are synthesized by amino acids catabolism/reconstruction combined with dimethyl sulfoxide insertion/cyclization for the first time. The amino acid acts as a carbon and nitrogen source through HI-mediated catabolism...


2020 ◽  
Vol 86 (19) ◽  
Author(s):  
Yu-Zhong Zhang ◽  
Wei-Xin Zhang ◽  
Xiu-Lan Chen

ABSTRACT Proteins are a main organic nitrogen source for microorganisms. Many heterotrophic microorganisms secrete extracellular proteases (ex-proteases) to efficiently decompose proteins into oligopeptides and amino acids when exterior proteins are required for growth. These ex-proteases not only play important roles in microbial nutrient acquisition or host infection but also contribute greatly to the global recycling of carbon and nitrogen. Moreover, may microbial ex-proteases have important applications in industrial, medical, and biotechnological areas. Therefore, uncovering the mechanisms by which microorganisms initiate the expression of ex-protease genes in response to exterior proteins is of great significance. In this review, the progress made in understanding the induction mechanisms of microbial ex-proteases in response to exterior proteins is summarized, with a focus on the inducer molecules, membrane sensors, and downstream pathways. Problems to be solved for better understanding of the induction mechanisms of microbial ex-proteases are also discussed.


PLoS ONE ◽  
2015 ◽  
Vol 10 (7) ◽  
pp. e0131865 ◽  
Author(s):  
Yun C. Chang ◽  
Ami Khanal Lamichhane ◽  
James Bradley ◽  
Laura Rodgers ◽  
Popchai Ngamskulrungroj ◽  
...  

1975 ◽  
Vol 53 (7) ◽  
pp. 600-603 ◽  
Author(s):  
Howard Harding

Isolates of Bipolaris sorokiniana grew to some extent on the D-isomers of 15 amino acids supplied as the sole nitrogen source. D-histidine did not support growth of any isolate. No conidia were produced by cultures grown on D-arginine. There was no consistent relationship between length of conidia produced by D- and L-isomers of the same amino acid. The trend was towards the production of shorter conidia on D-amino acids, although isolates varied considerably in their response. Conidia produced on D-phenylalanine were markedly shorter than those produced on the L-isomer, although isolates varied in the magnitude of response. A similar effect was recorded with aspartic acid as the nitrogen source but only in buffered medium. Conidia produced on D-ornithine were longer than those produced on L-ornithine, although this response was less-marked in buffered medium. Generally, the numbers of pseudosepta per conidium were higher in conidia produced on the L-isomer of individual amino acids. Although this increase in numbers usually paralleled the increased length of conidia, there was a large range in correlation coefficients between the two values over different isolate–substrate combinations.


1985 ◽  
Vol 31 (1) ◽  
pp. 68-74 ◽  
Author(s):  
G. Rossignol ◽  
P. Dion

Culture media selective for Agrobacterium were inoculated with dilutions of soil and crown gall tumor suspensions. Colonies on the selective media were replica plated on a medium with octopine or nopaline. More than 500 isolates were recovered, about 10% of which were confirmed as octopine-utilizing, fluorescent pseudomonads. These strains, together with four other strains of Pseudomonas that had been isolated in a previous study, were characterized for species identity, for utilization of various carbon sources, and for capacity to grow with various opines and amino acids as the sole carbon and nitrogen source. The capacities for octopine and nopaline utilization were generally dissociated, which is similar to the situation found in Agrobacterium. However, most of the octopine-utilizing strains of Pseudomonas showed markedly different growth kinetics in octopine and octopinic acid, two compounds that, in the Agrobacterium system, have been classified into the same opine family. Generally, poor octopinic acid utilization was not correlated with poor ornithine utilization.


1972 ◽  
Vol 18 (11) ◽  
pp. 1647-1650 ◽  
Author(s):  
Harvest Halvorson

The utilization of single L-amino acids as sole source of carbon and nitrogen by bacteria was studied and was found to be very common and widely distributed over many genera. Field soil contained large numbers of such bacteria; 7.7–79.2% of the colony count obtained on nutrient agar could be achieved by using a single amino acid as sole carbon and nitrogen source. Twenty taxonomically known bacteria which could use one or more amino acids were examined for the range of amino acids over which they could grow. Organisms which grew on one amino acid usually grew on several. Some ecological aspects of these findings are discussed.


2008 ◽  
Vol 59 (11) ◽  
Author(s):  
Iulia Lupan ◽  
Sergiu Chira ◽  
Maria Chiriac ◽  
Nicolae Palibroda ◽  
Octavian Popescu

Amino acids are obtained by bacterial fermentation, extraction from natural protein or enzymatic synthesis from specific substrates. With the introduction of recombinant DNA technology, it has become possible to apply more rational approaches to enzymatic synthesis of amino acids. Aspartase (L-aspartate ammonia-lyase) catalyzes the reversible deamination of L-aspartic acid to yield fumaric acid and ammonia. It is one of the most important industrial enzymes used to produce L-aspartic acid on a large scale. Here we described a novel method for [15N] L-aspartic synthesis from fumarate and ammonia (15NH4Cl) using a recombinant aspartase.


1984 ◽  
Vol 49 (8) ◽  
pp. 1846-1853 ◽  
Author(s):  
Karel Hauzer ◽  
Tomislav Barth ◽  
Linda Servítová ◽  
Karel Jošt

A post-proline endopeptidase (EC 3.4.21.26) was isolated from pig kidneys using a modified method described earlier. The enzyme was further purified by ion exchange chromatography on DEAE-Sephacel. The final product contained about 95% of post-proline endopeptidase. The enzyme molecule consisted of one peptide chain with a relative molecular mass of 65 600 to 70 000, containing a large proportion of acidic and alifatic amino acids (glutamic acid, aspartic acid and leucine) and the N-terminus was formed by aspartic acid or asparagine. In order to prevent losses of enzyme activity, thiol compounds has to be added.


Animals ◽  
2021 ◽  
Vol 11 (4) ◽  
pp. 1088
Author(s):  
Satoshi Haga ◽  
Hiroshi Ishizaki ◽  
Sanggun Roh

Levels of alpha-tocopherol (α-Toc) decline gradually in blood throughout prepartum, reaching lowest levels (hypovitaminosis E) around calving. Despite numerous reports about the disease risk in hypovitaminosis E and the effect of α-Toc supplementation on the health of transition dairy cows, its risk and supplemental effects are controversial. Here, we present some novel data about the disease risk of hypovitaminosis E and the effects of α-Toc supplementation in transition dairy cows. These data strongly demonstrate that hypovitaminosis E is a risk factor for the occurrence of peripartum disease. Furthermore, a study on the effectiveness of using serum vitamin levels as biomarkers to predict disease in dairy cows was reported, and a rapid field test for measuring vitamin levels was developed. By contrast, evidence for how hypovitaminosis E occurred during the transition period was scarce until the 2010s. Pioneering studies conducted with humans and rodents have identified and characterised some α-Toc-related proteins, molecular players involved in α-Toc regulation followed by a study in ruminants from the 2010s. Based on recent literature, the six physiological factors: (1) the decline in α-Toc intake from the close-up period; (2) changes in the digestive and absorptive functions of α-Toc; (3) the decline in plasma high-density lipoprotein as an α-Toc carrier; (4) increasing oxidative stress and consumption of α-Toc; (5) decreasing hepatic α-Toc transfer to circulation; and (6) increasing mammary α-Toc transfer from blood to colostrum, may be involved in α-Toc deficiency during the transition period. However, the mechanisms and pathways are poorly understood, and further studies are needed to understand the physiological role of α-Toc-related molecules in cattle. Understanding the molecular mechanisms underlying hypovitaminosis E will contribute to the prevention of peripartum disease and high performance in dairy cows.


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