scholarly journals Common micro- and macroscale principles of connectivity in the human brain

2021 ◽  
Author(s):  
Lianne H. Scholtens ◽  
Rory Pijnenburg ◽  
Siemon C. de Lange ◽  
Inge Huitinga ◽  
Martijn P. van den Heuvel ◽  
...  
Keyword(s):  
White Matter ◽  
Information Transfer ◽  
Large Scale ◽  
Pyramidal Neurons ◽  
Brain Connectivity ◽  
Branch Points ◽  
Dendritic Trees ◽  
Macro Scale ◽  
Tree Length ◽  
Organizational Principles

AbstractThe brain requires efficient information transfer between neurons and between large-scale brain regions. Brain connectivity follows predictable organizational principles: at the cellular level, larger supragranular pyramidal neurons have larger dendritic trees, more synapses, more complex branching and perform more complex neuronal computations; at the macro-scale, region-to-region connections are suggested to display a diverse architecture with highly connected hub-areas facilitating complex information integration and computation. Here, we explore the hypothesis that the branching structure of large-scale region-to-region connectivity follows similar organizational principles as known for the neuronal scale. We examine microscale connectivity of basal dendritic trees of supragranular pyramidal neurons (300+) across ten cortical areas in five human donor brains (1M/4F). Dendritic complexity was quantified as the number of branch points, tree length, spine count, spine density and overall branching complexity. High-resolution diffusion-weighted MRI was used to construct ‘white matter trees’ of cortico-cortical wiring. Examining the complexity of the resulting white matter trees using the same measures as for dendritic trees shows multimodal association areas to have larger, more complexly branched white matter trees than primary areas (all p<0.0001) and regional macroscale complexity to run in parallel with microscale measures, in terms of number of inputs (r=0.677, p=0.032), branch points (r=0.790, p=0.006), total tree length (r=0.664, p=0.036) and branching complexity (r=0.724, p=0.018). Our findings support the integrative theory that brain connectivity is structured following similar ‘principles of connectivity’ at the neuronal and macroscale level, and provide a framework to study connectivity changes in brain conditions at multiple levels of brain organization.

What Has Direct Cortical and Subcortical Electrostimulation Taught Us about Neurolinguistics?

2019 ◽  
pp. 185-211
Author(s):  
Hugues Duffau
Keyword(s):  
White Matter ◽  
Large Scale ◽  
Functional Neuroimaging ◽  
Great Accuracy ◽  
Subcortical White Matter ◽  
Cerebral Lesions ◽  
Physiological Basis ◽  
Postoperative Mri ◽  
The Brain

Investigating the neural and physiological basis of language is one of the most important challenges in neurosciences. Direct electrical stimulation (DES), usually performed in awake patients during surgery for cerebral lesions, is a reliable tool for detecting both cortical and subcortical (white matter and deep grey nuclei) regions crucial for cognitive functions, especially language. DES transiently interacts locally with a small cortical or axonal site, but also nonlocally, as the focal perturbation will disrupt the entire subnetwork sustaining a given function. Thus, in contrast to functional neuroimaging, DES represents a unique opportunity to identify with great accuracy and reproducibility, in vivo in humans, the structures that are actually indispensable to the function, by inducing a transient virtual lesion based on the inhibition of a subcircuit lasting a few seconds. Currently, this is the sole technique that is able to directly investigate the functional role of white matter tracts in humans. Thus, combining transient disturbances elicited by DES with the anatomical data provided by pre- and postoperative MRI enables to achieve reliable anatomo-functional correlations, supporting a network organization of the brain, and leading to the reappraisal of models of language representation. Finally, combining serial peri-operative functional neuroimaging and online intraoperative DES allows the study of mechanisms underlying neuroplasticity. This chapter critically reviews the basic principles of DES, its advantages and limitations, and what DES can reveal about the neural foundations of language, that is, the large-scale distribution of language areas in the brain, their connectivity, and their ability to reorganize.

scholarly journals Pairwise maximum entropy model explains the role of white matter structure in shaping emergent co-activation states

2021 ◽  
Vol 4 (1) ◽  
Author(s):  
Arian Ashourvan ◽  
Preya Shah ◽  
Adam Pines ◽  
Shi Gu ◽  
Christopher W. Lynn ◽  
...  
Keyword(s):  
White Matter ◽  
Maximum Entropy ◽  
Large Scale ◽  
Structural Connectivity ◽  
Quantitative Relationship ◽  
Brain Regions ◽  
Maximum Entropy Model ◽  
Entropy Model ◽  
Activation Patterns ◽  
Co Activation

AbstractA major challenge in neuroscience is determining a quantitative relationship between the brain’s white matter structural connectivity and emergent activity. We seek to uncover the intrinsic relationship among brain regions fundamental to their functional activity by constructing a pairwise maximum entropy model (MEM) of the inter-ictal activation patterns of five patients with medically refractory epilepsy over an average of ~14 hours of band-passed intracranial EEG (iEEG) recordings per patient. We find that the pairwise MEM accurately predicts iEEG electrodes’ activation patterns’ probability and their pairwise correlations. We demonstrate that the estimated pairwise MEM’s interaction weights predict structural connectivity and its strength over several frequencies significantly beyond what is expected based solely on sampled regions’ distance in most patients. Together, the pairwise MEM offers a framework for explaining iEEG functional connectivity and provides insight into how the brain’s structural connectome gives rise to large-scale activation patterns by promoting co-activation between connected structures.

scholarly journals Tractography Alterations in the Arcuate and Uncinate Fasciculi in Post-Stroke Aphasia

2021 ◽  
Vol 11 (1) ◽  
pp. 53
Author(s):  
Sara Kierońska ◽  
Milena Świtońska ◽  
Grzegorz Meder ◽  
Magdalena Piotrowska ◽  
Paweł Sokal
Keyword(s):  
White Matter ◽  
Brain Connectivity ◽  
Three Dimensional ◽  
Cerebral White Matter ◽  
Neural Pathways ◽  
Uncinate Fasciculus ◽  
Arcuate Fasciculus ◽  
Fiber Tractography ◽  
Post Stroke

Fiber tractography based on diffuse tensor imaging (DTI) can reveal three-dimensional white matter connectivity of the human brain. Tractography is a non-invasive method of visualizing cerebral white matter structures in vivo, including neural pathways surrounding the ischemic area. DTI may be useful for elucidating alterations in brain connectivity resulting from neuroplasticity after stroke. We present a case of a male patient who developed significant mixed aphasia following ischemic stroke. The patient had been treated by mechanical thrombectomy followed by an early rehabilitation, in conjunction with transcranial direct current stimulation (tDCS). DTI was used to examine the arcuate fasciculus and uncinate fasciculus upon admission and again at three months post-stroke. Results showed an improvement in the patient’s symptoms of aphasia, which was associated with changes in the volume and numbers of tracts in the uncinate fasciculus and the arcuate fasciculus.

scholarly journals INTRACISTRONIC MAPPING OF ELECTROPHORETIC SITES IN DROSOPHILA MELANOGASTER: FIDELITY OF INFORMATION TRANSFER BY GENE CONVERSION

Genetics ◽  
1974 ◽  
Vol 76 (2) ◽  
pp. 289-299
Author(s):  
Margaret McCarron ◽  
William Gelbart ◽  
Arthur Chovnick
Keyword(s):  
Drosophila Melanogaster ◽  
Information Transfer ◽  
Large Scale ◽  
Genetic Basis ◽  
Xanthine Dehydrogenase ◽  
Specific Protein ◽  
Wild Type ◽  
Electrophoretic Variation ◽  
The Stability ◽  
Recombination Experiments

ABSTRACT A convenient method is described for the intracistronic mapping of genetic sites responsible for electrophoretic variation of a specific protein in Drosophila melanogaster. A number of wild-type isoalleles of the rosy locus have been isolated which are associated with the production of electrophoretically distinguishable xanthine dehydrogenases. Large-scale recombination experiments were carried out involving null enzyme mutants induced on electrophoretically distinct wild-type isoalleles, the genetic basis for which is followed as a nonselective marker in the cross. Additionally, a large-scale recombination experiment was carried out involving null enzyme rosy mutants induced on the same wild-type isoallele. Examination of the electrophoretic character of crossover and convertant products recovered from the latter experiment revealed that all exhibited the same parental electrophoretic character. In addition to documenting the stability of the xanthine dehydrogenase electrophoretic character, this observation argues against a special mutagenesis hypothesis to explain conversions resulting from allele recombination studies.

scholarly journals Land Use Transition and Driving Forces in Chinese Loess Plateau: A Case Study from Pu County, Shanxi Province

Land ◽  
2021 ◽  
Vol 10 (1) ◽  
pp. 67
Author(s):  
Han Huang ◽  
Yang Zhou ◽  
Mingjie Qian ◽  
Zhaoqi Zeng
Keyword(s):  
Land Use ◽  
Food Security ◽  
Loess Plateau ◽  
Large Scale ◽  
Driving Forces ◽  
Chinese Loess Plateau ◽  
Shanxi Province ◽  
Forest Land ◽  
Land Use Transition ◽  
Macro Scale

Land use transition is essentially one of the manifestations of land use/cover change (LUCC). Although a large number of studies have focused on land use transitions on the macro scale, there are few studies on the micro scale. Based on the data of two high-resolution land use surveys, this study used a land use transfer matrix and GeoDetector model to explore the spatial-temporal patterns and driving forces of land use transitions at the village level in Pu County over a ten-year period. Results show that Pu County has experienced a drastic process of land use transition. More than 80% of cropland and grassland have been converted to forest land, and over 90% of the expansion of built-up land came from the occupation of forest land, cropland, and grassland. The driving forces of land use transition and its magnitude depended on the type of land use. The implementation of the policy of returning farmland to forest, or grain-for-green (GFG) was the main driving force for the large-scale conversion of cultivated land to forest land in Pu County. In the context of policy of returning farmland to forests, the hilly and gully regions of China’s Loess Plateau must balance between protecting the ecology and ensuring food security. Promoting the comprehensive consolidation of gully land and developing modern agriculture may be an important way to achieve a win-win goal of ecological protection and food security.

scholarly journals Functional Brain Connectivity Revealed by Sparse Coding of Large-Scale Local Field Potential Dynamics

2018 ◽  
Vol 32 (2) ◽  
pp. 255-270 ◽  
Author(s):  
Han Wang ◽  
Kun Xie ◽  
Li Xie ◽  
Xiang Li ◽  
Meng Li ◽  
...  
Keyword(s):  
Local Field ◽  
Sparse Coding ◽  
Local Field Potential ◽  
Large Scale ◽  
Brain Connectivity ◽  
Field Potential ◽  
Functional Brain

scholarly journals White matter abnormalities in the corpus callosum with cognitive impairment in Parkinson disease

Neurology ◽  
2018 ◽  
Vol 91 (24) ◽  
pp. e2244-e2255 ◽  
Author(s):  
Ian O. Bledsoe ◽  
Glenn T. Stebbins ◽  
Doug Merkitch ◽  
Jennifer G. Goldman
Keyword(s):  
Cognitive Impairment ◽  
White Matter ◽  
Corpus Callosum ◽  
Parkinson Disease ◽  
Information Transfer ◽  
Diffusion Tensor ◽  
Anterior Segment ◽  
Mean Diffusivity ◽  
Cognitive Domain ◽  
White Matter Abnormalities

ObjectiveTo evaluate microstructural characteristics of the corpus callosum using diffusion tensor imaging (DTI) and their relationships to cognitive impairment in Parkinson disease (PD).MethodsSeventy-five participants with PD and 24 healthy control (HC) participants underwent structural MRI brain scans including DTI sequences and clinical and neuropsychological evaluations. Using Movement Disorder Society criteria, PD participants were classified as having normal cognition (PD-NC, n = 23), mild cognitive impairment (PD-MCI, n = 35), or dementia (PDD, n = 17). Cognitive domain (attention/working memory, executive function, language, memory, visuospatial function) z scores were calculated. DTI scalar values, including fractional anisotropy (FA), mean diffusivity (MD), axial diffusivity (AD), and radial diffusivity (RD), were established for 5 callosal segments on a midsagittal plane, single slice using a topographically derived parcellation method. Scalar values were compared among participant groups. Regression analyses were performed on cognitive domain z scores and DTI metrics.ResultsParticipants with PD showed increased AD values in the anterior 3 callosal segments compared to healthy controls. Participants with PDD had significantly increased AD, MD, and RD in the anterior 2 segments compared to participants with PD-NC and most anterior segment compared to participants with PD-MCI. FA values did not differ significantly between participants with PD and participants with HC or among PD cognitive groups. The strongest associations for the DTI metrics and cognitive performance occurred in the most anterior and most posterior callosal segments, and also reflected fronto-striatal and posterior cortical type cognitive deficits, respectively.ConclusionsMicrostructural white matter abnormalities of the corpus callosum, as measured by DTI, may contribute to PD cognitive impairment by disrupting information transfer across interhemispheric and callosal–cortical projections.

Attentional load modulates large-scale functional brain connectivity beyond the core attention networks

NeuroImage ◽  
2015 ◽  
Vol 109 ◽  
pp. 260-272 ◽  
Author(s):  
Dag Alnæs ◽  
Tobias Kaufmann ◽  
Geneviève Richard ◽  
Eugene P. Duff ◽  
Markus H. Sneve ◽  
...  
Keyword(s):  
Large Scale ◽  
Brain Connectivity ◽  
Attention Networks ◽  
Functional Brain ◽  
The Core ◽  
Attentional Load

scholarly journals Measuring Community Green Inequity: A Fine-Scale Assessment of Beijing Urban Area

Land ◽  
2021 ◽  
Vol 10 (11) ◽  
pp. 1197
Author(s):  
Yuyang Zhang ◽  
Qilin Wu ◽  
Lei Wu ◽  
Yan Li
Keyword(s):  
Urban Area ◽  
Evaluation System ◽  
Large Scale ◽  
Green Space ◽  
Community Gardens ◽  
Data Availability ◽  
Green Spaces ◽  
Fine Scale ◽  
Macro Scale ◽  
Community Residents

Green space exposure is beneficial to the physical and mental health of community residents, but the spatial distribution of green space is inequitable. Due to data availability, green equality or justice studies typically use administrative units as contextual areas to evaluate green spaces exposure, which is macro-scale and may lead to biased estimates as it ignores fine-scale green spaces (e.g. community gardens, lawns), that community residents are more frequently exposed to. In this study, we used the community as the unit of analysis, considered the green exposure of community residents in their daily social and physical activities, obtained data on three types of green spaces including fine-scale green spaces in the communities, surrounding large-scale parks and streetscape images. We propose a series of metrics for assessing community green equity, including a total of 11 metrics in three major categories of morphology, visibility and accessibility and applied them to 4,544 communities in Beijing urban area. Through spatial visualization, spatial clustering, radar plots, and correlation analysis, we comprehensively analyzed the equity of green space at the community scale, identified the cold and hot spots of homogeneity, and then analyzed the equity of green space among regions under the urbanization process. The measurement results of these metrics showed that there are large differences and complementarities between different categories of metrics, but similarities exist between metrics of the same category. The proposed methodology represents the development of a green space evaluation system that can be used by decision makers and urban green designers to create and maintain more equitable community green spaces. In addition, the large-scale, comprehensive and fine-scale green space measurement of this study can be combined with other studies such as public health and environmental pollution in the future to obtain more comprehensive conclusions and better guide the construction and regeneration of green spaces.

scholarly journals Stroke-related alterations in inter-areal communication revealed via Granger causality analysis

2021 ◽  
Author(s):  
Michele Allegra ◽  
Chiara Favaretto ◽  
Nicholas Metcalf ◽  
Maurizio Corbetta ◽  
Andrea Brovelli
Keyword(s):  
Functional Connectivity ◽  
Granger Causality ◽  
Resting State ◽  
Information Transfer ◽  
Large Scale ◽  
Functional Organization ◽  
Information Flows ◽  
Causality Analysis ◽  
Stroke Patients ◽  
Granger Causality Analysis

ABSTRACTNeuroimaging and neurological studies suggest that stroke is a brain network syndrome. While causing local ischemia and cell damage at the site of injury, stroke strongly perturbs the functional organization of brain networks at large. Critically, functional connectivity abnormalities parallel both behavioral deficits and functional recovery across different cognitive domains. However, the reasons for such relations remain poorly understood. Here, we tested the hypothesis that alterations in inter-areal communication underlie stroke-related modulations in functional connectivity (FC). To this aim, we used resting-state fMRI and Granger causality analysis to quantify information transfer between brain areas and its alteration in stroke. Two main large-scale anomalies were observed in stroke patients. First, inter-hemispheric information transfer was strongly decreased with respect to healthy controls. Second, information transfer within the affected hemisphere, and from the affected to the intact hemisphere was reduced. Both anomalies were more prominent in resting-state networks related to attention and language, and they were correlated with impaired performance in several behavioral domains. Overall, our results support the hypothesis that stroke perturbs inter-areal communication within and across hemispheres, and suggest novel therapeutic approaches aimed at restoring normal information flow.SIGNIFICANCE STATEMENTA thorough understanding of how stroke perturbs brain function is needed to improve recovery from the severe neurological syndromes affecting stroke patients. Previous resting-state neuroimaging studies suggested that interaction between hemispheres decreases after stroke, while interaction between areas of the same hemisphere increases. Here, we used Granger causality to reconstruct information flows in the brain at rest, and analyze how stroke perturbs them. We showed that stroke causes a global reduction of inter-hemispheric communication, and an imbalance between the intact and the affected hemisphere: information flows within and from the latter are impaired. Our results may inform the design of stimulation therapies to restore the functional balance lost after stroke.

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