Damage assessment for selection of resistance to the spotted stalk borer and genetic correlations for resistance and yield components in sugarcane

2008 ◽  
Vol 127 (1) ◽  
pp. 38-42 ◽  
Author(s):  
S. Nibouche ◽  
R. Tibère
Keyword(s):  
Yield Components ◽  
Damage Assessment ◽  
Genetic Correlations ◽  
Stalk Borer ◽  
Selection Of ◽  
Selection Of Resistance

The Effects of Shock Vancomycin Concentrations on the Formation of Heteroresistance in Staphylococcus aureus

2020 ◽  
Vol 65 (9-10) ◽  
pp. 3-7
Author(s):  
V. V. Gostev ◽  
Yu. V. Sopova ◽  
O. S. Kalinogorskaya ◽  
M. E. Velizhanina ◽  
I. V. Lazareva ◽  
...  
Keyword(s):  
Staphylococcus Aureus ◽  
In Vitro Selection ◽  
Methicillin Resistant Staphylococcus Aureus ◽  
High Concentration ◽  
Short Term ◽  
High Concentrations ◽  
Selection Of ◽  
Selection Of Resistance ◽  
Test Cultures

Glycopeptides are the basis of the treatment of infections caused by MRSA (Methicillin-Resistant Staphylococcus aureus). Previously, it was demonstrated that antibiotic tolerant phenotypes are formed during selection of resistance under the influence of high concentrations of antibiotics. The present study uses a similar in vitro selection model with vancomycin. Clinical isolates of MRSA belonging to genetic lines ST8 and ST239, as well as the MSSA (ATCC29213) strain, were included in the experiment. Test isolates were incubated for five hours in a medium with a high concentration of vancomycin (50 μg/ml). Test cultures were grown on the medium without antibiotic for 18 hours after each exposure. A total of ten exposure cycles were performed. Vancomycin was characterized by bacteriostatic action; the proportion of surviving cells after exposure was 70–100%. After selection, there was a slight increase in the MIC to vancomycin (MIC 2 μg/ml), teicoplanin (MIC 1.5–3 μg/ml) and daptomycin (MIC 0.25–2 μg/ml). According to the results of PAP analysis, all strains showed an increase in the area under curve depending on the concentration of vancomycin after selection, while a heteroresistant phenotype (with PAP/AUC 0.9) was detected in three isolates. All isolates showed walK mutations (T188S, D235N, E261V, V380I, and G223D). Exposure to short-term shock concentrations of vancomycin promotes the formation of heteroresistance in both MRSA and MSSA. Formation of VISA phenotypes is possible during therapy with vancomycin.

scholarly journals Prediction of meat quality traits in the abattoir using portable near-infrared spectrometers: heritability of predicted traits and genetic correlations with laboratory-measured traits

2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Simone Savoia ◽  
Andrea Albera ◽  
Alberto Brugiapaglia ◽  
Liliana Di Stasio ◽  
Alessio Cecchinato ◽  
...  
Keyword(s):  
Meat Quality ◽  
Near Infrared ◽  
External Validation ◽  
Genetic Correlations ◽  
Genetic Selection ◽  
Quality Traits ◽  
Eye Muscle ◽  
Meat Quality Traits ◽  
Color Traits ◽  
Selection Of

Abstract Background The possibility of assessing meat quality traits over the meat chain is strongly limited, especially in the context of selective breeding which requires a large number of phenotypes. The main objective of this study was to investigate the suitability of portable infrared spectrometers for phenotyping beef cattle aiming to genetically improving the quality of their meat. Meat quality traits (pH, color, water holding capacity, tenderness) were appraised on rib eye muscle samples of 1,327 Piemontese young bulls using traditional (i.e., reference/gold standard) laboratory analyses; the same traits were also predicted from spectra acquired at the abattoir on the intact muscle surface of the same animals 1 d after slaughtering. Genetic parameters were estimated for both laboratory measures of meat quality traits and their spectra-based predictions. Results The prediction performances of the calibration equations, assessed through external validation, were satisfactory for color traits (R2 from 0.52 to 0.80), low for pH and purge losses (R2 around 0.30), and very poor for cooking losses and tenderness (R2 below 0.20). Except for lightness and purge losses, the heritability estimates of most of the predicted traits were lower than those of the measured traits while the genetic correlations between measured and predicted traits were high (average value 0.81). Conclusions Results showed that NIRS predictions of color traits, pH, and purge losses could be used as indicator traits for the indirect genetic selection of the reference quality phenotypes. Results for cooking losses were less effective, while the NIR predictions of tenderness were affected by a relatively high uncertainty of estimate. Overall, genetic selection of some meat quality traits, whose direct phenotyping is difficult, can benefit of the application of infrared spectrometers technology.

scholarly journals Insecticide resistance status of Anopheles arabiensis in irrigated and non-irrigated areas in western Kenya

2021 ◽  
Vol 14 (1) ◽  
Author(s):  
Pauline Winnie Orondo ◽  
Steven G. Nyanjom ◽  
Harrysone Atieli ◽  
John Githure ◽  
Benyl M. Ondeto ◽  
...  
Keyword(s):  
Insecticide Resistance ◽  
Vector Control ◽  
Anopheles Arabiensis ◽  
Crop Protection ◽  
Indoor Residual Spraying ◽  
Malaria Vectors ◽  
Western Kenya ◽  
Animal Protection ◽  
Selection Of ◽  
Selection Of Resistance

Abstract Background Malaria control in Kenya is based on case management and vector control using long-lasting insecticidal nets (LLINs) and indoor residual spraying (IRS). However, the development of insecticide resistance compromises the effectiveness of insecticide-based vector control programs. The use of pesticides for agricultural purposes has been implicated as one of the sources driving the selection of resistance. The current study was undertaken to assess the status and mechanism of insecticide resistance in malaria vectors in irrigated and non-irrigated areas with varying agrochemical use in western Kenya. Methods The study was carried out in 2018–2019 in Homa Bay County, western Kenya. The bioassay was performed on adults reared from larvae collected from irrigated and non-irrigated fields in order to assess the susceptibility of malaria vectors to different classes of insecticides following the standard WHO guidelines. Characterization of knockdown resistance (kdr) and acetylcholinesterase-inhibiting enzyme/angiotensin-converting enzyme (Ace-1) mutations within Anopheles gambiae s.l. species was performed using the polymerase chain reaction (PCR) method. To determine the agricultural and public health insecticide usage pattern, a questionnaire was administered to farmers, households, and veterinary officers in the study area. Results Anopheles arabiensis was the predominant species in the irrigated (100%, n = 154) area and the dominant species in the non-irrigated areas (97.5%, n = 162), the rest being An. gambiae sensu stricto. In 2018, Anopheles arabiensis in the irrigated region were susceptible to all insecticides tested, while in the non-irrigated region reduced mortality was observed (84%) against deltamethrin. In 2019, phenotypic mortality was decreased (97.8–84% to 83.3–78.2%). In contrast, high mortality from malathion (100%), DDT (98.98%), and piperonyl butoxide (PBO)-deltamethrin (100%) was observed. Molecular analysis of the vectors from the irrigated and non-irrigated areas revealed low levels of leucine-serine/phenylalanine substitution at position 1014 (L1014S/L1014F), with mutation frequencies of 1–16%, and low-frequency mutation in the Ace-1R gene (0.7%). In addition to very high coverage of LLINs impregnated with pyrethroids and IRS with organophosphate insecticides, pyrethroids were the predominant chemical class of pesticides used for crop and animal protection. Conclusion Anopheles arabiensis from irrigated areas showed increased phenotypic resistance, and the intensive use of pesticides for crop protection in this region may have contributed to the selection of resistance genes observed. The susceptibility of these malaria vectors to organophosphates and PBO synergists in pyrethroids offers a promising future for IRS and insecticide-treated net-based vector control interventions. These findings emphasize the need for integrated vector control strategies, with particular attention to agricultural practices to mitigate mosquito resistance to insecticides. Graphic abstract

scholarly journals Estimation of Genetic Parameters for Body Weight and Some Colour Traits in the Seventh-generation Index Selected Nigeria Heavy Local Chicken Ecotype

2021 ◽  
Author(s):  
I.J. Ohagenyi ◽  
F.C. Iregbu ◽  
V.C. Udeh
Keyword(s):  
Body Weight ◽  
Genetic Parameters ◽  
Genetic Correlations ◽  
The Body ◽  
Pedigree Selection ◽  
Egg Colour ◽  
Local Chicken ◽  
Range Test ◽  
Estimation Of Genetic Parameters ◽  
Selection Of

Background: This study was conducted to estimate the genetic parameters of body weight and some colour traits in seventh generation (G7) index selected Nigerian Heavy Local Chicken Ecotype (NHLCE) progenies at point of lay to 12 weeks. Methods: 5 sires and 12 hens were used to generate the progenies used for the experiment. Traits measured included weekly body weight, egg colour, beak colour and feather colour. Data collected were subjected to one way analysis of variance in a Paternal half sib analysis using Animal model of SAS (2003). Four weeks body weight measurements, egg colour, beak colour and feather colour for 5 sires ranged from 1.29±0.05 1.54±0.07; 2.55±0.02 to 4.00±0.02; 2.45±0.02 to 4.83±0.02 and 1.73±0.02 to 4.58±0.04 respectively. Result: The new Duncan’s multiple range test shows that sire families are similar (p greater than 0.05) in the body weight and beak colour, but significantly differed (p greater than 0.05) in the egg colour and feather colour. The heritability estimates of mature body weight for week 3 was medium, while estimates of heritability for weekly mature body weight for weeks 1, 2 and 4, egg colour, beak colour and feather colour of NHLCE were low heritability. Low h2 of traits suggest that progeny and pedigree selection could be employed for improvement of the egg colour, beak colour and feather colour of NHLCE. The study showed positive genetic correlations between beak colour and egg colour, negative genetic correlations between beak and feather colour. This means that no decision can be taken in isolation as the selection of one trait will have consequences on other traits.

scholarly journals Developing donors of ultra-early maturity in barley

2021 ◽  
Vol 181 (4) ◽  
pp. 83-92
Author(s):  
I. A. Zveinek ◽  
O. N. Kovaleva
Keyword(s):  
Yield Components ◽  
Growing Season ◽  
Climatic Conditions ◽  
Limiting Factor ◽  
Early Maturity ◽  
Norm Of Reaction ◽  
Hybrid Combination ◽  
Recessive Genes ◽  
Good Productivity ◽  
Selection Of

Background. The length of the growing season is a limiting factor in many regions with unstable climatic conditions. The development of ultra-early barley donors makes it possible to accelerate the breeding process aimed at producing commercial cultivars adapted to cultivation area requirements.Materials and methods. The donors Kibel, Kibel uluchshenny, Kibtsel and Kibkor were obtained through individual selection of barley forms combining earliness and productivity from the hybrid combination Belogorsky × k-15881. The experiments were carried out according to the approved guidelines. Yield components were used to calculate the index of productivity for the donors versus the reference cv. ‘Belogorsky’.Results and conclusions. Earliness is controlled in the donors by three recessive genes. The donors’ period from emergence to heading was 7–9 days shorter than that of the reference cv. ‘Belogorsky’, with a low norm of reaction, which attested to their high adaptability. The resulting barley forms were highly resistant to lodging. The donor Kibel uluchshenny in all spike yield components did not differ from the reference. The other donors were close to the reference in spike length and 1000 seed weight. The example of Kibel uluchshenny was used to demonstrate the possibility of producing barley forms combining high earliness and good productivity. The developed donors may prove useful in the breeding for earliness in the areas where the length of the growing season is a limiting factor. 

18 Genetic and Phenotypic Parameters for Aleutian Disease Tests and Their Correlations with Pelt Quality, Reproductive Performance, Packed-cell Volume, and Harvest Length in Mink

2021 ◽  
Vol 99 (Supplement_3) ◽  
pp. 8-9
Author(s):  
Guoyu Hu ◽  
Duy Ngoc Do ◽  
Karim Karimi ◽  
Younes Miar
Keyword(s):  
Cell Volume ◽  
Reproductive Performance ◽  
Packed Cell Volume ◽  
Fixed Effects ◽  
Complex Disease ◽  
Genetic Correlations ◽  
Study Data ◽  
Economic Losses ◽  
Enzyme Linked Immunosorbent Assay ◽  
Selection Of

Abstract Aleutian disease (AD) is an untreatable immune complex disease in mink and brings tremendous economic losses to the mink industry globally. The ineffectiveness of culling, immunoprophylaxis, and medical treatment in controlling AD have urged mink farmers to select AD-resilient mink based on the AD tests. However, the genetic analysis of these tests and their correlations with AD-resilient traits have not been investigated. In this study, data on 5,824 mink were used to estimate the genetic and phenotypic parameters of four AD tests, including two systems of enzyme-linked immunosorbent assay (ELISA), counterimmunoelectrophoresis (CIEP), and iodine agglutination test (IAT), and their genetic and phenotypic correlations with pelt quality, reproductive performance, packed-cell volume (PCV), and harvest length (HL). Significance (P < 0.05) of fixed effects (sex, year, color type, the number of mating, and dam age), covariates (age at blood sampling and age at harvest), and random effects (additive genetic, permanent environmental, and maternal effects) were determined using univariate models. The genetic and phenotypic parameters for all traits were estimated under bivariate models using ASReml 4.1. Estimated heritabilities (±SE) were 0.39±0.05, 0.61±0.07, 0.11±0.07, and 0.26±0.05 for antigen-based ELISA (ELISA-G), virus capsid protein-based ELISA, CIEP, and IAT, respectively. The ELISA-G showed moderate repeatability (0.58±0.04) and significant (P < 0.05) negative genetic correlations (±SE) with reproductive performance traits (from -0.41±0.16 to -0.49±0.12), PCV (-0.53±0.09), and HL (-0.45±0.16). These results indicated that the selection of mink with a lower ELISA-G score could not only decrease the anti-AMDV antibody level and the extent of anemia but also improve the female reproductive performance and the harvest length of mink without causing adverse influences on the pelt quality. Hence, ELISA-G could be applied as an indicator for genetic selection of AD-resilient mink and help mink farmers reduce the adverse effects of AD.

PSVII-28 Genetic analysis of frame score and performance traits in Nellore cattle–growth, carcass and efficiency traits

2021 ◽  
Vol 99 (Supplement_3) ◽  
pp. 238-239
Author(s):  
Maria Paula Negreiros ◽  
Elisa Peripolli ◽  
Claudio U Magnabosco ◽  
Nayanny Guimarães ◽  
Raysildo Lôbo ◽  
...  
Keyword(s):  
Animal Model ◽  
Growth Traits ◽  
Genetic Correlations ◽  
Genetic Selection ◽  
Heritability Estimate ◽  
Score System ◽  
Adult Weight ◽  
Nellore Cattle ◽  
And Performance ◽  
Selection Of

Abstract We evaluated a novel frame score system for Nellore cattle raised on pasture (Guimarães et al., 2020 J, Anim. Sci. 98 (Suppl. 4)). Growth traits included age-adjusted weights (kg) at birth (W0), 120 (W120), 210 (W210) and 450 (W450) days of age, and adult weight (AW). Carcass traits (by ultrasound) included ribeye area (REA, cm2), 12th-13th rib backfat (BF, mm), rump fat (RF, mm), and intramuscular fat (IMF, %). Feed efficiency traits included residual feed intake (RFI, kg of DM/d) and DM intake (DMI, kg/d). We applied the previously developed equations (that also include hip height (HH, cm) and age to 12,049 records from the National Association of Breeders and Researchers (ANCP) database:FSmales= -20.35 + 0.1305*REA + 0.2633*BF - 0.5901*RF+ 0.1139*HH + 0.0056*AGEFSfemales = -11.87 + 0.1316*REA - 0.2457*BF - 0.6218*RF + 0.1139*HH + 0.0009507*AGEThe (co)variance components and genetic parameters were estimated using a linear animal model or a threshold animal model depending on the trait. The heritability estimate for frame score was moderate (0.30). Estimated genetic correlations were moderate for growth traits (W0, 0.51; W120, 0.41; W210, 0.35; W450, 0.29; AW, 0.39). Estimated genetic correlations for carcass and efficiency traits ranged from low to high (REA, 0.50; BF, -0.25; RF, -0.84; IMF, -0.15; DMI, 0.29; RFI, 0.10). The estimates support the notion that larger frame animals are heavier, leaner and later maturing, and less feed efficient. The new frame score may be a useful tool for genetic selection of animals that are best suited to their environment.

scholarly journals In vitro antimicrobial combination testing of and evolution of resistance to the first-in-class spiropyrimidinetrione zoliflodacin combined with six therapeutically relevant antimicrobials for Neisseria gonorrhoeae

2019 ◽  
Vol 74 (12) ◽  
pp. 3521-3529 ◽  
Author(s):  
Sunniva Foerster ◽  
George Drusano ◽  
Daniel Golparian ◽  
Michael Neely ◽  
Laura J V Piddock ◽  
...  
Keyword(s):  
Neisseria Gonorrhoeae ◽  
Single Agent ◽  
Curve Analysis ◽  
Phase Iii ◽  
Transmitted Infection ◽  
Kill Curve ◽  
Time Kill ◽  
Selection Of ◽  
Selection Of Resistance

Abstract Objectives Resistance in Neisseria gonorrhoeae to all gonorrhoea therapeutic antimicrobials has emerged. Novel therapeutic antimicrobials are imperative and the first-in-class spiropyrimidinetrione zoliflodacin appears promising. Zoliflodacin could be introduced in dual antimicrobial therapies to prevent the emergence and/or spread of resistance. We investigated the in vitro activity of and selection of resistance to zoliflodacin alone and in combination with six gonorrhoea therapeutic antimicrobials against N. gonorrhoeae. Methods The international gonococcal reference strains WHO F (WT) and WHO O, WHO V and WHO X (strains with different AMR profiles) were examined. Zoliflodacin was evaluated alone or combined with ceftriaxone, cefixime, spectinomycin, gentamicin, tetracycline, cethromycin or sitafloxacin in chequerboard assays, time–kill curve analysis and selection-of-resistance studies. Results Zoliflodacin alone or in combination with all six antimicrobials showed rapid growth inhibition against all examined strains. The time–kill curve analysis indicated that tetracycline or cethromycin combined with zoliflodacin can significantly decrease the zoliflodacin kill rate in vitro. The frequency of selected zoliflodacin-resistance mutations was low when evaluated as a single agent and further reduced for all antimicrobial combinations. All resistant mutants contained the GyrB mutations D429N, K450T or K450N, resulting in zoliflodacin MICs of 0.5–4 mg/L. Conclusions Zoliflodacin, alone or in combination with sexually transmitted infection therapeutic antimicrobials, rapidly kills gonococci with infrequent resistance emergence. Zoliflodacin remains promising for gonorrhoea oral monotherapy and as part of dual antimicrobial therapy with low resistance emergence potential. A Phase III trial evaluating efficacy and safety of zoliflodacin for uncomplicated gonorrhoea treatment is planned in 2019.

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