scholarly journals Draft Genome Sequences of Three Nontypeable Strains of Haemophilus influenzae, C188, R535, and 1200, Isolated from Different Types of Disease

2017 ◽  
Vol 5 (12) ◽  
Author(s):  
Ulrike Kappler ◽  
Rabeb Dhouib ◽  
Remya Purushothaman Nair ◽  
Alastair G. McEwan
Keyword(s):  
Antibiotic Resistance ◽  
Haemophilus Influenzae ◽  
Otitis Media ◽  
Respiratory Diseases ◽  
Draft Genome ◽  
Respiratory Pathogen ◽  
Genome Sequences ◽  
Content Type ◽  
Chronic Respiratory Diseases ◽  
Different Types

ABSTRACT Nontypeable Haemophilus influenzae is a persistent human respiratory pathogen known to be involved in a range of acute and chronic respiratory diseases. Here, we report the genome sequences of three H. influenzae strains isolated from sputum, otitis media, and blood. Comparative analyses revealed significant differences in the gene contents including the presence of genes mediating antibiotic resistance.

scholarly journals Draft Genome Sequences of Ciprofloxacin-Resistant Salmonella enterica Strains with Multiple-Antibiotic Resistance, Isolated from Imported Foods

2017 ◽  
Vol 5 (45) ◽  
Author(s):  
Ashraf A. Khan ◽  
Bijay K. Khajanchi ◽  
Sana A. Khan ◽  
Christopher A. Elkins ◽  
Steven L. Foley
Keyword(s):  
Antibiotic Resistance ◽  
Salmonella Enterica ◽  
Draft Genome ◽  
Resistance Mechanisms ◽  
Whole Genome Sequencing Data ◽  
Sequencing Data ◽  
Genome Sequences ◽  
Content Type ◽  
Imported Foods ◽  
High Level

ABSTRACT We report here the draft genome sequences of 15 ciprofloxacin-resistant Salmonella enterica strains with resistance to multiple other antibiotics, including aminoglycosides, β-lactams, sulfonamides, tetracycline, and trimethoprim, isolated from different imported foods. Three strains (NCTR75, NCTR281, and NCTR350) showed a high level of ciprofloxacin resistance compared to that of the other isolates. The whole-genome sequencing data provide a better understanding of the antibiotic resistance mechanisms and virulence properties of these isolates.

scholarly journals Draft Genome Sequences of Five Enterococcus Species Isolated from the Gut of Patients with Suspected Clostridium difficile Infection

2017 ◽  
Vol 5 (20) ◽  
Author(s):  
Eduardo Castro-Nallar ◽  
Sandro L. Valenzuela ◽  
Sebastián Baquedano ◽  
Carolina Sánchez ◽  
Fabiola Fernández ◽  
...  
Keyword(s):  
Antibiotic Resistance ◽  
Clostridium Difficile ◽  
Hidden Markov Models ◽  
Markov Models ◽  
Hidden Markov ◽  
Draft Genome ◽  
Enterococcus Species ◽  
Beta Lactams ◽  
Genome Sequences ◽  
Content Type

ABSTRACT We present draft genome sequences of five Enterococcus species from patients suspected of Clostridium difficile infection. Genome completeness was confirmed by presence of bacterial orthologs (97%). Gene searches using Hidden-Markov models revealed that the isolates harbor between seven and 11 genes involved in antibiotic resistance to tetracyclines, beta-lactams, and vancomycin.

scholarly journals Draft Genome Sequences of Nonclinical and Clinical Enterobacter cloacae Isolates Exhibiting Multiple Antibiotic Resistance and Virulence Factors

2017 ◽  
Vol 5 (45) ◽  
Author(s):  
Mitali Mishra ◽  
Shashank Patole ◽  
Harapriya Mohapatra
Keyword(s):  
Antibiotic Resistance ◽  
Efflux Pump ◽  
Draft Genome ◽  
Enterobacter Cloacae ◽  
Multidrug Resistant ◽  
Multiple Antibiotic Resistance ◽  
Opportunistic Pathogens ◽  
Genome Sequences ◽  
Content Type ◽  
Therapeutic Drugs

ABSTRACT Enterobacter spp. have been implicated as opportunistic pathogens which over the years have gained resistance toward most of the available therapeutic drugs. We sequenced two multidrug-resistant Enterobacter cloacae isolates harboring multiple efflux pump genes. These isolates exhibited strain-specific modulation of efflux pump protein expression.

scholarly journals Draft Genome Sequences of Interpatient and Intrapatient Epidemiologically Linked Neisseria gonorrhoeae Isolates

2018 ◽  
Vol 6 (16) ◽  
pp. e00319-18
Author(s):  
Sonja Hirk ◽  
Sarah Lepuschitz ◽  
Adriana Cabal Rosel ◽  
Steliana Huhulescu ◽  
Marion Blaschitz ◽  
...  
Keyword(s):  
Public Health ◽  
Antibiotic Resistance ◽  
Neisseria Gonorrhoeae ◽  
Draft Genome ◽  
World Health ◽  
Genome Sequences ◽  
Content Type ◽  
The World ◽  
Public Health Threat ◽  
Health Organization

ABSTRACT Neisseria gonorrhoeae is the causative agent of gonorrhea and was identified by the World Health Organization as an urgent public health threat due to emerging antibiotic resistance. Here, we report 13 draft genome sequences of N. gonorrhoeae isolates derived from two epidemiologically linked cases from Austria.

scholarly journals Draft Genome Sequences of Cefepime-Resistant and -Susceptible Escherichia coli Strains and Imipenem-Resistant and -Susceptible Pseudomonas aeruginosa Strains

2021 ◽  
Vol 10 (48) ◽  
Author(s):  
Kendra Batchelder ◽  
Liz Ward ◽  
Elsa Collins ◽  
Caitlin Miles ◽  
Stefania Palm ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Pseudomonas Aeruginosa ◽  
Antibiotic Resistance ◽  
Resistance Genes ◽  
Draft Genome ◽  
Antibiotic Resistance Genes ◽  
Genome Sequences ◽  
Content Type ◽  
E Coli

Draft genome sequences of Escherichia coli and Pseudomonas aeruginosa strains collected from clinical infections were used to determine the prevalence of newly emerging antibiotic resistance genes in Maine. Comparisons between cefepime-resistant and -susceptible E. coli strains and imipenem-resistant and -susceptible P. aeruginosa strains are being conducted.

scholarly journals Draft Genome Sequences of Six Enterococcus faecalis Strains Isolated from Malaysian Clinical and Environmental Origins

2017 ◽  
Vol 5 (24) ◽  
Author(s):  
Diane Sunira Daniel ◽  
Han Ming Gan ◽  
Sui Mae Lee ◽  
Gary A. Dykes ◽  
Sadequr Rahman
Keyword(s):  
Antibiotic Resistance ◽  
Urinary Tract ◽  
Enterococcus Faecalis ◽  
Urinary Tract Infections ◽  
Draft Genome ◽  
Public Concern ◽  
Genome Sequences ◽  
Content Type ◽  
Tract Infections ◽  
Virulence Properties

ABSTRACT Enterococcus faecalis is known to cause a variety of nosocomial infections, including urinary tract infections. Antibiotic resistance and virulence properties in this species are of public concern. The draft genome sequences of six E. faecalis strains isolated from clinical and environmental sources in Malaysia are presented here.

scholarly journals Draft Genome Sequences of Salmonella enterica Serovar Enteritidis and Kentucky Isolates from Retail Poultry Sources

2018 ◽  
Vol 6 (14) ◽  
Author(s):  
Zhaohao Shi ◽  
Pravin R. Kaldhone ◽  
Bijay K. Khajanchi ◽  
Steven L. Foley ◽  
Steven C. Ricke
Keyword(s):  
Antibiotic Resistance ◽  
Salmonella Enterica ◽  
Biofilm Formation ◽  
Draft Genome ◽  
Genome Sequences ◽  
Salmonella Enterica Serovar Enteritidis ◽  
Content Type

ABSTRACT The draft genome sequences of four Salmonella enterica serovar Enteritidis and Kentucky isolates were evaluated for biofilm formation and antibiotic resistance. The Salmonella serovar Kentucky strains CFS84 and CFS85 and Salmonella serovar Enteritidis strains CFS86 and CFS87 were isolated from retail poultry sources in Arkansas.

scholarly journals Draft Genome Sequences of Pandrug-Resistant Serratia marcescens Clinical Isolates Harboring blaNDM-1

2017 ◽  
Vol 5 (3) ◽  
Author(s):  
Yancheng Yao ◽  
Linda Falgenhauer ◽  
Volkhard A. J. Kempf ◽  
Michael Hogardt ◽  
Stephan Göttig ◽  
...  
Keyword(s):  
Antibiotic Resistance ◽  
Serratia Marcescens ◽  
Resistance Genes ◽  
Draft Genome ◽  
Antibiotic Resistance Genes ◽  
Clinical Isolates ◽  
Genome Sequences ◽  
Content Type ◽  
Resistance Phenotype ◽  
Large Pool

ABSTRACT The draft genome sequences of two clonal, pandrug-resistant Serratia marcescens clinical isolates were determined. The resistance phenotype was plasmid driven, as 14 of 17 resistance genes were present on large IncFIB(K), IncHI2, and IncA/C2 plasmids indicating a large pool of transmissible antibiotic resistance genes.

scholarly journals Draft Genome Sequences of 12 Mycolicibacterium smegmatis Strains Resistant to Imidazo[1,2-b][1,2,4,5]Tetrazines

2019 ◽  
Vol 8 (16) ◽  
Author(s):  
Aleksey A. Vatlin ◽  
Kirill V. Shur ◽  
Valery N. Danilenko ◽  
Dmitry A. Maslov
Keyword(s):  
Draft Genome ◽  
Transcriptional Repressor ◽  
Antituberculosis Drug ◽  
Genome Sequences ◽  
Content Type ◽  
Drug Candidates

Here, we report 12 draft genome sequences of mutant Mycolicibacterium smegmatis strains resistant to imidazo[1,2-b][1,2,4,5]tetrazines, which are antituberculosis drug candidates. We have identified 7 different mutations in the MSMEG_1380 gene, which encodes the AcrR/TetR_N transcriptional repressor, which may activate efflux-mediated resistance.

scholarly journals Draft Genome Sequences of Three Flavobacterium psychrophilum Strains Isolated from Diseased Ayu (Plecoglossus altivelis altivelis) Caught at Three Sites in the Kagami River in Kochi, Japan

2019 ◽  
Vol 8 (34) ◽  
Author(s):  
Hazuki Yamashita ◽  
Takayuki Wada ◽  
Yusuke Kato ◽  
Takuji Ikeda ◽  
Masayuki Imajoh
Keyword(s):  
Draft Genome ◽  
Psychrophilic Bacterium ◽  
Genome Sequences ◽  
Plecoglossus Altivelis ◽  
Gram Negative ◽  
Content Type ◽  
Flavobacterium Psychrophilum ◽  
Skin Ulcers ◽  
The Family

Flavobacterium psychrophilum is a Gram-negative, psychrophilic bacterium within the family Flavobacteriaceae. Here, we report the draft genome sequences of three F. psychrophilum strains isolated from skin ulcers of diseased ayu caught by tomozuri angling at three sites in the Kagami River in Japan.

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