scholarly journals Complete Genome Sequences of Highly Arsenite-Resistant Bacteria Brevibacterium sp. Strain CS2 and Micrococcus luteus AS2

2019 ◽  
Vol 8 (31) ◽  
Author(s):  
Shahid Sher ◽  
Abdul Rehman ◽  
Lars Hestbjerg Hansen ◽  
Tue Kjærgaard Nielsen
Keyword(s):  
Resistance Genes ◽  
Complete Genome ◽  
Micrococcus Luteus ◽  
Resistant Bacteria ◽  
Genome Sequences ◽  
Single Chromosome ◽  
Arsenite Resistance

The complete genome sequences of two highly arsenite-resistant Actinomycetales isolates are presented. Both genomes are G+C rich and consist of a single chromosome containing homologs of known arsenite resistance genes.

scholarly journals Complete Genome Sequences of Micrococcus luteus Strains NCCP 15687 and NCCP 16831, Isolated in South Korea

2020 ◽  
Vol 9 (9) ◽  
Author(s):  
Sanghyun Lee ◽  
Ye-Won An ◽  
Chi-Hwan Choi ◽  
Mi-Ran Yun ◽  
Suyeon Kim ◽  
...  
Keyword(s):  
South Korea ◽  
National Culture ◽  
Complete Genome ◽  
Genomic Dna ◽  
Micrococcus Luteus ◽  
Culture Collection ◽  
Genome Sequences ◽  
Blood Samples ◽  
Content Type

In this study, the complete genome sequences of Micrococcus luteus strains NCCP 15687 and NCCP 16831 were determined and deposited in the National Culture Collection for Pathogens (NCCP) of South Korea. Genomic DNA was isolated from blood samples from patients infected with M. luteus.

scholarly journals Complete Genome Sequences of 17 Canadian Isolates of Salmonella enterica subsp. enterica Serovar Heidelberg from Human, Animal, and Food Sources: TABLE 1

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Geneviève Labbé ◽  
Kim Ziebell ◽  
Sadjia Bekal ◽  
Kimberley A. Macdonald ◽  
E. Jane Parmley ◽  
...  
Keyword(s):  
Drug Resistance ◽  
Resistance Genes ◽  
Salmonella Enterica ◽  
Complete Genome ◽  
Foodborne Illness ◽  
Food Sources ◽  
Genome Sequences ◽  
Human Animal

Salmonella enterica subsp. enterica serovar Heidelberg is a highly clonal serovar frequently associated with foodborne illness. To facilitate subtyping efforts, we report fully assembled genome sequences of 17 Canadian S . Heidelberg isolates including six pairs of epidemiologically related strains. The plasmid sequences of eight isolates contain several drug resistance genes.

scholarly journals Complete Genome Sequences of Four Streptococcus canis Strains Isolated from Dogs in South Korea

2020 ◽  
Vol 9 (33) ◽  
Author(s):  
Jae-Seok Kim ◽  
Shoichi Sakaguchi ◽  
Yasuto Fukushima ◽  
Haruno Yoshida ◽  
Takashi Nakano ◽  
...  
Keyword(s):  
Antimicrobial Resistance ◽  
South Korea ◽  
Resistance Genes ◽  
Complete Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Antimicrobial Resistance Genes ◽  
Streptococcus Canis ◽  
Sequence Types

ABSTRACT This study reports the complete genome sequences of four strains of Streptococcus canis isolated from dogs in South Korea. Their genomes ranged from 2.157 to 2.265 Mbp, with a G+C content of 39.6% to 39.7%. The sequence types, antimicrobial resistance genes, and S. canis M-like protein alleles were characterized.

scholarly journals Complete Genome Sequences of Campylobacter jejuni Strains OD267 and WP2202 Isolated from Retail Chicken Livers and Gizzards Reveal the Presence of Novel 116-Kilobase and 119-Kilobase Megaplasmids with Type VI Secretion Systems

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Daya Marasini ◽  
Mohamed K. Fakhr
Keyword(s):  
Campylobacter Jejuni ◽  
Resistance Genes ◽  
Complete Genome ◽  
Tetracycline Resistance ◽  
Secretion System ◽  
Type Vi Secretion System ◽  
Secretion Systems ◽  
Genome Sequences ◽  
Tetracycline Resistance Genes ◽  
Type Vi Secretion

Genome sequences of Campylobacter jejuni strains OD267 and WP2202, isolated from chicken livers and gizzards, showed the presence of novel 116-kb and 119-kb megaplasmids, respectively. The two megaplasmids carry a type VI secretion system and tetracycline resistance genes. These are the largest sequenced Campylobacter plasmids to date.

scholarly journals Complete genome analysis of African swine fever virus responsible for outbreaks in domestic pigs in 2018 in Burundi and 2019 in Malawi

2021 ◽  
Vol 53 (4) ◽  
Author(s):  
Jean N. Hakizimana ◽  
Jean B. Ntirandekura ◽  
Clara Yona ◽  
Lionel Nyabongo ◽  
Gladson Kamwendo ◽  
...  
Keyword(s):  
Complete Genome ◽  
African Swine Fever Virus ◽  
Gc Content ◽  
Genomic Analysis ◽  
African Swine Fever ◽  
Eastern Africa ◽  
Nucleotide Identity ◽  
Comparative Genomic ◽  
Genome Sequences ◽  
Domestic Pigs

AbstractSeveral African swine fever (ASF) outbreaks in domestic pigs have been reported in Burundi and Malawi and whole-genome sequences of circulating outbreak viruses in these countries are limited. In the present study, complete genome sequences of ASF viruses (ASFV) that caused the 2018 outbreak in Burundi (BUR/18/Rutana) and the 2019 outbreak in Malawi (MAL/19/Karonga) were produced using Illumina next-generation sequencing (NGS) platform and compared with other previously described ASFV complete genomes. The complete nucleotide sequences of BUR/18/Rutana and MAL/19/Karonga were 176,564 and 183,325 base pairs long with GC content of 38.62 and 38.48%, respectively. The MAL/19/Karonga virus had a total of 186 open reading frames (ORFs) while the BUR/18/Rutana strain had 151 ORFs. After comparative genomic analysis, the MAL/19/Karonga virus showed greater than 99% nucleotide identity with other complete nucleotides sequences of p72 genotype II viruses previously described in Tanzania, Europe and Asia including the Georgia 2007/1 isolate. The Burundian ASFV BUR/18/Rutana exhibited 98.95 to 99.34% nucleotide identity with genotype X ASFV previously described in Kenya and in Democratic Republic of the Congo (DRC). The serotyping results classified the BUR/18/Rutana and MAL/19/Karonga ASFV strains in serogroups 7 and 8, respectively. The results of this study provide insight into the genetic structure and antigenic diversity of ASFV strains circulating in Burundi and Malawi. This is important in order to understand the transmission dynamics and genetic evolution of ASFV in eastern Africa, with an ultimate goal of designing an efficient risk management strategy against ASF transboundary spread.

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