Glomeromycetes from the Magdalen Islands archipelago: analyzing diversity and meta-community structure in a sand-dune ecosystem

Botany ◽  
2016 ◽  
Vol 94 (12) ◽  
pp. 1195-1208
Author(s):  
Yolande Dalpé ◽  
Sylvie Séguin ◽  
Pierre-Luc Chagnon
Keyword(s):  
Mycorrhizal Fungi ◽  
Sand Dune ◽  
Arbuscular Mycorrhizal ◽  
Additional Species ◽  
Generalist Species ◽  
Ammophila Breviligulata ◽  
Sand Trap ◽  
Species Pairs ◽  
Arbuscular Mycorrhizal Fungal ◽  
Magdalen Islands

This report presents the first survey and analysis of the arbuscular mycorrhizal fungi community associated with Ammophila breviligulata Fernald (American beachgrass), of the Magdalen Islands archipelago, Quebec. Of the 36 selected harvesting sites, a total of 180 sand samples were collected from the rhizosphere of American beachgrass. Analyses were performed on the original sand samples and root and sand trap cultures. Of the 34 spore-morphotypes found, 31 belonged to glomoid spore species. Of the field sand samples, 72% contained the spores of Glomeromycetes and subsequent trap cultures increased this percentage to 84%. Of the 34 species, 29 were found sporulating in indigenous sand samples at harvest time, and only five additional species were recovered from root and sand trap pot culturing. Among the more generalist species were Rhizoglomus irregulare and G. sp4, which were found in 19 sites, Rhizoglomus aggregatum and Corymbiglomus tortuosum (found in 17 sites), Funneliformis mosseae and G. sp3 (found in 15 sites). This meta-community of Glomeromycetes is shown to have significant nestedness, indicating that fungal taxa that are more frequent in the whole archipelago are also more abundant locally. Some species pairs are shown to display significant negative associations in their patterns of co-occurrence. The relevance of these results for arbuscular mycorrhizal fungal community assembly and dynamics is discussed.

scholarly journals Micro-Landscape Dependent Changes in Arbuscular Mycorrhizal Fungal Community Structure

2021 ◽  
Vol 11 (11) ◽  
pp. 5297
Author(s):  
Stavros D. Veresoglou ◽  
Leonie Grünfeld ◽  
Magkdi Mola
Keyword(s):  
Community Structure ◽  
Mycorrhizal Fungi ◽  
Root Colonization ◽  
Environmental Parameters ◽  
Arbuscular Mycorrhizal ◽  
Fungal Community Structure ◽  
High Connectivity ◽  
Spatio Temporal ◽  
Arbuscular Mycorrhizal Fungal ◽  
Colonization Rates

The roots of most plants host diverse assemblages of arbuscular mycorrhizal fungi (AMF), which benefit the plant hosts in diverse ways. Even though we understand that such AMF assemblages are non-random, we do not fully appreciate whether and how environmental settings can make them more or less predictable in time and space. Here we present results from three controlled experiments, where we manipulated two environmental parameters, habitat connectance and habitat quality, to address the degree to which plant roots in archipelagos of high connectivity and invariable habitats are colonized with (i) less diverse and (ii) easier to predict AMF assemblages. We observed no differences in diversity across our manipulations. We show, however, that mixing habitats and varying connectivity render AMF assemblages less predictable, which we could only detect within and not between our experimental units. We also demonstrate that none of our manipulations favoured any specific AMF taxa. We present here evidence that the community structure of AMF is less responsive to spatio-temporal manipulations than root colonization rates which is a facet of the symbiosis which we currently poorly understand.

scholarly journals The Phosphate Inhibition Paradigm: Host and Fungal Genotypes Determine Arbuscular Mycorrhizal Fungal Colonization and Responsiveness to Inoculation in Cassava With Increasing Phosphorus Supply

2021 ◽  
Vol 12 ◽  
Author(s):  
Ricardo Alexander Peña Venegas ◽  
Soon-Jae Lee ◽  
Moses Thuita ◽  
Deusdedit Peter Mlay ◽  
Cargele Masso ◽  
...  
Keyword(s):  
Mycorrhizal Fungi ◽  
Arbuscular Mycorrhizal ◽  
Field Trials ◽  
P Uptake ◽  
Fungal Colonization ◽  
P Availability ◽  
Terrestrial Plants ◽  
Soil Microbial ◽  
Arbuscular Mycorrhizal Fungal ◽  
P Supply

A vast majority of terrestrial plants are dependent on arbuscular mycorrhizal fungi (AMF) for their nutrient acquisition. AMF act as an extension of the root system helping phosphate uptake. In agriculture, harnessing the symbiosis can potentially increase plant growth. Application of the AMF Rhizophagus irregularis has been demonstrated to increase the yields of various crops. However, there is a paradigm that AMF colonization of roots, as well as the plant benefits afforded by inoculation with AMF, decreases with increasing phosphorus (P) supply in the soil. The paradigm suggests that when fertilized with sufficient P, inoculation of crops would not be beneficial. However, the majority of experiments demonstrating the paradigm were conducted in sterile conditions without a background AMF or soil microbial community. Interestingly, intraspecific variation in R. irregularis can greatly alter the yield of cassava even at a full application of the recommended P dose. Cassava is a globally important crop, feeding 800 million people worldwide, and a crop that is highly dependent on AMF for P uptake. In this study, field trials were conducted at three locations in Kenya and Tanzania using different AMF and cassava varieties under different P fertilization levels to test if the paradigm occurs in tropical field conditions. We found that AMF colonization and inoculation responsiveness of cassava does not always decrease with an increased P supply as expected by the paradigm. The obtained results demonstrate that maximizing the inoculation responsiveness of cassava is not necessarily only in conditions of low P availability, but that this is dependent on cassava and fungal genotypes. Thus, the modeling of plant symbiosis with AMF under different P levels in nature should be considered with caution.

A “paper bridge” system to improve in-vitro propagation of arbuscular mycorrhizal fungi

Botany ◽  
2010 ◽  
Vol 88 (6) ◽  
pp. 617-620 ◽  
Author(s):  
Yolande Dalpé ◽  
Sylvie Seguin
Keyword(s):  
Arbuscular Mycorrhizal Fungi ◽  
Mycorrhizal Fungi ◽  
Arbuscular Mycorrhizal ◽  
Petri Dish ◽  
Efficient System ◽  
Arbuscular Mycorrhizal Fungal ◽  
Slow Growing ◽  
Paper Bridge ◽  
Bridge System

The in-vitro culture of arbuscular mycorrhizal fungi on excised roots, especially when performed on bi-compartmented Petri dishes, has proven to be an efficient system for the production of root-free fungal material. However, even after the contact between fungal hyphae and the excised roots in the proximal root compartment has occurred, up to several weeks may be required for the fungal runner hyphae to cross the median Petri dish wall and reach the distal fungal compartment. This delay is particularly long for the cultivation of slow-growing strains that usually colonize the substrate less aggressively. The delay is due to the difficulty the runner hyphae have in crossing the median Petri dish wall that separates compartments. To facilitate the passage of the fungus across the median wall, a “paper bridge” system has been devised and tested with a number of arbuscular mycorrhizal fungal strains. This method substantially accelerated fungal propagation and simplified the manipulations necessary. The proposed paper-bridge system is described and its advantages discussed.

Interspecific differences in the tolerance of arbuscular mycorrhizal fungi to freezing and drying

2001 ◽  
Vol 79 (10) ◽  
pp. 1161-1166 ◽  
Author(s):  
John N Klironomos ◽  
Miranda M Hart ◽  
Jane E Gurney ◽  
Peter Moutoglis
Keyword(s):  
Arbuscular Mycorrhizal Fungi ◽  
Plant Species ◽  
Mycorrhizal Fungi ◽  
Arbuscular Mycorrhizal ◽  
Fungal Species ◽  
Drought Treatment ◽  
Interspecific Differences ◽  
The Difference ◽  
One Year ◽  
Arbuscular Mycorrhizal Fungal

Arbuscular mycorrhizal fungal communities in northern temperate ecosystems must function during extremes in environmental conditions. However, it is not known if arbuscular mycorrhizal fungi that co-exist in soil communities have similar tolerances to stresses such as drought and freezing. The phenology of arbuscular mycorrhizal fungi was determined over one year in a community in southern Ontario, Canada. Five fungal species from the same community were then used to inoculate five plant species, in all possible combinations, and were subjected to either a freezing treatment or a drought treatment after which new seedlings were transplanted into the treated pots. The percent colonization of roots of each plant species was measured as the difference in mean colonization from the control. Freezing reduced percent colonization in almost every case, whereas drought resulted in both increased and decreased percent colonization. Fungal species responded differently to the treatments, and there was a pronounced plant × fungus effect. These results support the hypothesis that distinct functional groups of arbuscular mycorrhizal fungi exist, and these may determine plant community structure.Key words: arbuscular mycorrhizal fungi, freezing, drying, functional diversity.

scholarly journals Paternal arbuscular mycorrhizal fungal status affects DNA methylation in seeds

2017 ◽  
Vol 13 (9) ◽  
pp. 20170407 ◽  
Author(s):  
Sandra Varga ◽  
Carl D. Soulsbury
Keyword(s):  
Dna Methylation ◽  
Mycorrhizal Fungi ◽  
Seed Mass ◽  
Arbuscular Mycorrhizal ◽  
Similar Proportion ◽  
Global Dna Methylation ◽  
Transgenerational Effects ◽  
Methylated Dna ◽  
Arbuscular Mycorrhizal Fungal ◽  
First Time

Most land plants grow in association with arbuscular mycorrhizal fungi (AMF) in their roots and these fungi can cause transgenerational effects on plants' offspring. These may be caused by changes in DNA methylation of the offspring. In this study, we compared the amount of global DNA methylation in seeds of the gynodioecious plant Geranium sylvaticum in relation to the gender and the AMF status of the parents producing the seeds. The amount of DNA methylated was positively related to seed mass. Seeds produced by females had a similar proportion of methylated DNA regardless of the AMF status of the father siring the seed. By contrast, seeds from hermaphrodites had higher DNA methylation when sired by AMF fathers. We show to the best of our knowledge for the first time, that the AMF status of fathers can affect DNA methylation in seeds and that these changes in DNA methylation are further dependent on the gender of the mother producing the seeds.

Root-colonizing and soil-borne communities of arbuscular mycorrhizal fungi in a temperate forest understorey

Botany ◽  
2014 ◽  
Vol 92 (4) ◽  
pp. 277-285 ◽  
Author(s):  
Ülle Saks ◽  
John Davison ◽  
Maarja Öpik ◽  
Martti Vasar ◽  
Mari Moora ◽  
...  
Keyword(s):  
Plant Species ◽  
Mycorrhizal Fungi ◽  
Plant Root ◽  
Arbuscular Mycorrhizal ◽  
Small Subunit ◽  
Plant Roots ◽  
Individual Plant ◽  
Amf Communities ◽  
Arbuscular Mycorrhizal Fungal ◽  
Phylogenetic Dispersion

We analyzed arbuscular mycorrhizal fungal (AMF) communities in plant root samples from a natural forest ecosystem — a primeval forest in Järvselja, Estonia. AMF small-subunit (SSU) ribosomal RNA genes were subjected to 454-pyrosequencing and BLAST-based taxonomic identification. Seventy-six AMF sequence groups (virtual taxa, VT) were identified from plant roots. Taken together with seven additional VT recorded in an earlier investigation of soil AMF communities at the site, this represents the highest number of AMF reported from a single ecosystem to date. The six study plant species hosted similar AMF communities. However, AMF community composition in plant roots was significantly different from that in soil and considerably more VT were retrieved from roots than from soil. AMF VT identified from plant roots as a whole and from individual plant species were frequently phylogenetically clustered compared with local and global taxon pools, suggesting that nonrandom assembly processes, notably habitat filtering, may have shaped fungal assemblages. In contrast, the phylogenetic dispersion of AMF communities in soil did not differ from random subsets of the local or global taxon pools.

Development of vesicular–arbuscular mycorrhizae in a young sweetgum plantation

1985 ◽  
Vol 15 (6) ◽  
pp. 1061-1064 ◽  
Author(s):  
Paul P. Kormanik
Keyword(s):  
Mycorrhizal Fungi ◽  
Arbuscular Mycorrhizae ◽  
Fungal Spores ◽  
Arbuscular Mycorrhizal ◽  
Available Phosphorus ◽  
Vesicular Arbuscular Mycorrhizae ◽  
Vesicular Arbuscular ◽  
Mycorrhizal Development ◽  
Crown Closure ◽  
Arbuscular Mycorrhizal Fungal

Sweetgum seedlings with vesicular–arbuscular mycorrhizae formed by Glomusetunicatum or Glomusdeserticola in nursery soil with 30 ppm available phosphorus (P) and nonmycorrhizal seedlings grown in nursery soil with 800 ppm available P were outplanted and whole trees were excavated periodically over the next 5 years in the plantation to follow mycorrhizal development. Four months after outplanting, roots of all initially nonmycorrhizal seedlings had formed vesicular–arbuscular mycorrhizae and the degree of root colonization was comparable to that of initially vesicular–arbuscular mycorrhizal seedlings. New feeder roots did not develop on seedlings of any treatment until almost 5 months after planting. By the end of the first growing season and for the remainder of the study, vesicular–arbuscular mycorrhizae development was approximately the same on all seedlings. The proportion of feeder roots colonized by vesicular–arbuscular mycorrhizal fungi stabilized at 65 to 70%; approximately 56% of the cortical tissues of all feeder roots were colonized with arbuscles, vesicles, and hyphae. Periodic assays of the soil in the plantation showed that vesicular–arbuscular mycorrhizal fungal spores gradually declined from an initial high of 3600 spores to 620 spores per 100-cm3 soil sample after 5 years. This decline was probably caused by crown closure of the sweetgum trees which gradually suppressed understory vegetation.

scholarly journals Effects of Inoculum Additions in the Presence of a Preestablished Arbuscular Mycorrhizal Fungal Community

2013 ◽  
Vol 79 (20) ◽  
pp. 6507-6515 ◽  
Author(s):  
Martina Janoušková ◽  
Karol Krak ◽  
Cameron Wagg ◽  
Helena Štorchová ◽  
Petra Caklová ◽  
...  
Keyword(s):  
Plant Growth ◽  
Mycorrhizal Fungi ◽  
Positive Response ◽  
Arbuscular Mycorrhizal ◽  
Plant Productivity ◽  
Ecological Aspect ◽  
Trade Off ◽  
Fungal Abundance ◽  
Managed Ecosystems ◽  
Arbuscular Mycorrhizal Fungal

ABSTRACTCommunities of arbuscular mycorrhizal fungi (AMF) are crucial for promoting plant productivity in most terrestrial systems, including anthropogenically managed ecosystems. Application of AMF inocula has therefore become a widespread practice. It is, however, pertinent to understand the mechanisms that govern AMF community composition and their performance in order to design successful manipulations. Here we assess whether the composition and plant growth-promotional effects of a synthetic AMF community can be altered by inoculum additions of the isolates forming the community. This was determined by following the effects of three AMF isolates, each inoculated in two propagule densities into a preestablished AMF community. Fungal abundance in roots and plant growth were evaluated in three sequential harvests. We found a transient positive response in AMF abundance to the intraspecific inoculation only in the competitively weakest isolate. The other two isolates responded negatively to intra- and interspecific inoculations, and in some cases plant growth was also reduced. Our results suggest that increasing the AMF density may lead to increased competition among fungi and a trade-off with their ability to promote plant productivity. This is a key ecological aspect to consider when introducing AMF into soils.

scholarly journals Differential responses of arbuscular mycorrhizal fungal communities to long-term fertilization in the wheat rhizosphere and root endosphere

2021 ◽  
Author(s):  
Yuying Ma ◽  
Huanchao Zhang ◽  
Daozhong Wang ◽  
Xisheng Guo ◽  
Teng Yang ◽  
...  
Keyword(s):  
Arbuscular Mycorrhizal Fungi ◽  
Mycorrhizal Fungi ◽  
Rhizosphere Soil ◽  
Organic Amendments ◽  
Alpha Diversity ◽  
Arbuscular Mycorrhizal ◽  
Mineral Fertilization ◽  
Amf Communities ◽  
Arbuscular Mycorrhizal Fungal

Arbuscular mycorrhizal fungi (AMF) provide essential nutrients to crops and are critically impacted by fertilization in agricultural ecosystems. Understanding shifts in AMF communities in and around crop roots under different fertilization regimes can provide important lessons for improving agricultural production and sustainability. Here, we compared the responses of AMF communities in the rhizosphere (RS) and root endosphere (ES) of wheat ( Triticum aestivum ) to different fertilization treatments: Non-fertilization (Control), mineral fertilization only (NPK), mineral fertilization plus wheat straw (NPKS), and mineral fertilization plus cow manure (NPKM). We employed high-throughput amplicon sequencing and investigated the diversity, community composition, and network structure of AMF communities to assess their responses to fertilization. Our results elucidated that AMF communities in the RS and ES respond differently to fertilization schemes. Long-term NPK application decreased the RS AMF alpha diversity significantly, whereas additional organic amendments (straw or manure) had no effect. Contrastingly, NPK fertilization increased the ES AMF alpha diversity significantly, while additional organic amendments decreased it significantly. The effect of different fertilization schemes on AMF network complexity in the RS and ES were similar to their effects on alpha diversity. Changes to AMF communities in the RS and ES correlated mainly with the pH and phosphorus level of the rhizosphere soil under long-term inorganic and organic fertilization regimes. We suggest that the AMF community in the roots should be given more consideration when studying the effects of fertilization regimes on AMF in agroecosystems. Importance Arbuscular mycorrhizal fungi are an integral component of rhizospheres, bridging the soil and plant systems and are highly sensitive to fertilization. However, surprisingly little is known about how the response differs between the roots and the surrounding soil. Decreasing arbuscular mycorrhizal fungal diversity under fertilization has been reported, implying a potential reduction in the mutualism between plants and arbuscular mycorrhizal fungi. However, we found opposing responses to long-term fertilization managements of arbuscular mycorrhizal fungi in the wheat roots and rhizosphere soil. These results suggested that changes in the arbuscular mycorrhizal fungal community in soils do not reflect those in the roots, highlighting that the root arbuscular mycorrhizal fungal community is pertinent to understand arbuscular mycorrhizal fungi and their crop hosts’ responses to anthropogenic influences.

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