Arcopilus amazonicus (Chaetomiaceae), a new fungal species from the Amazon rainforest native plant Paullinia cupana

Phytotaxa ◽  
2020 ◽  
Vol 456 (2) ◽  
pp. 145-156
Author(s):  
THIAGO F. SOUSA ◽  
ALINE O. DOS SANTOS ◽  
FELIPE M.A. DA SILVA ◽  
FERNANDA F. CANIATO ◽  
CLÁUDIA A. DE QUEIROZ ◽  
...  
Keyword(s):  
Rna Polymerase Ii ◽  
High Performance ◽  
Large Subunit ◽  
Laboratory Culture ◽  
Morphological Characterization ◽  
Culture Conditions ◽  
Fungal Species ◽  
Native Plant ◽  
Paullinia Cupana ◽  
Chemical Profiles

Arcopilus is a genus recently proposed after the taxonomic restructuring of Chaetomium with only seven described species so far. During the characterization of the microbiome of the Amazonian guarana plant (Paullinia cupana var. sorbilis), nine red pigment-producing strains of fungi were isolated. These strains were identified through morphological characterization and phylogenetic analysis based on the internal transcribed spacer (ITS), 28S large subunit (LSU), partial second largest subunit of RNA polymerase II (RPB2) and β-tubulin (TUB2) regions. Moreover, chemical profiles were obtained via high-performance liquid chromatography coupled to tandem mass spectrometry (HPLC-MS/MS), in which the isolated strains were able to produce significant amounts of the polyketide oosporein. The obtained results indicate the occurrence of a new fungal species, A. amazonicus. Chemical analyses showed that oosporein is overproduced by these strains under laboratory culture conditions.

scholarly journals Stagonosporopsis pogostemonis: A Novel Ascomycete Fungus Causing Leaf Spot and Stem Blight on Pogostemon cablin (Lamiaceae) in South China

Pathogens ◽  
2021 ◽  
Vol 10 (9) ◽  
pp. 1093
Author(s):  
Zhang-Yong Dong ◽  
Ying-Hua Huang ◽  
Ishara S. Manawasinghe ◽  
Dhanushka N. Wanasinghe ◽  
Jia-Wei Liu ◽  
...  
Keyword(s):  
Rna Polymerase Ii ◽  
South China ◽  
Leaf Spot ◽  
Large Subunit ◽  
Fungal Species ◽  
Leaf Spot Disease ◽  
Causal Organism ◽  
Stem Blight ◽  
Southern Chinese ◽  
Pogostemon Cablin

Pogostemon cablin is one of the well-known Southern Chinese medicinal plants with detoxification, anti-bacterial, anti-inflammatory, and other pharmacological functions. Identification and characterization of phytopathogens on P. cablin are of great significance for the prevention and control of diseases. From spring to summer of 2019 and 2020, a leaf spot disease on Pogostemon cablin was observed in Guangdong Province, South China. The pathogen was isolated and identified based on both morphological and DNA molecular approaches. The molecular identification was conducted using multi-gene sequence analysis of large subunit (LSU), the nuclear ribosomal internal transcribed spacer (ITS), beta-tubulin (β-tubulin), and RNA polymerase II (rpb2) genes. The causal organism was identified as Stagonosporopsis pogostemonis, a novel fungal species. Pathogenicity of Stagonosporopsis pogostemonis on P. cablin was fulfilled via confining the Koch's postulates, causing leaf spots and stem blight disease. This is the first report of leaf spot diseases on P. cablin caused by Stagonosporopsis species worldwide.

Paraboeremia yungensis sp. nov., a new fungal species isolated from Las Yungas, South America, with promising tyrosinase production potential

Phytotaxa ◽  
2021 ◽  
Vol 528 (3) ◽  
pp. 191-201
Author(s):  
MARIA PATRICIA PERALTA ◽  
JOAQUÍN ALIAGA ◽  
OSVALDO DANIEL DELGADO ◽  
JULIA INÉS FARIÑA ◽  
BERNARDO ERNESTO LECHNER
Keyword(s):  
South America ◽  
Rna Polymerase Ii ◽  
Single Gene ◽  
Large Subunit ◽  
Fungal Species ◽  
Malt Extract ◽  
South American ◽  
South American Species ◽  
Morphological Studies ◽  
Identification Approach

In the context of a bioprospection programme for tyrosinase/L-DOPA- and melanin-producing fungal strains for biotechnological purposes, a hyperproducer isolate was obtained from Las Yungas rainforest, a relevant biodiverse ecoregion in North-Western Argentina. The selected strain was preliminarily identified as Paraboeremia sp. This is, to the best of our knowledge, the first native reported species of this genus in South America. Single-gene and multi-locus analyses of the internal transcribed spacer nuclear ribosomal RNA gene region (ITS), partial large subunit 28S nrDNA region (LSU), RNA polymerase II region (RPB2) and partial β-tubulin gene (TUB2) alignments were carried out to define the phylogenetic identity of this strain. As part of a polyphasic identification approach, these results were combined with morphological studies of active cultures growing on malt extract, oatmeal and potato dextrose agar plates. Incubation was performed under diverse conditions to stimulate sporulation for the subsequent micromorphological analysis. Microphotographs of pycnidia and conidia were taken with a scanning electron microscope. Maximum likelihood and Bayesian Inference analyses supported the location of the strain within the genus Paraboeremia, whilst morphological features allowed distinguishing it from previously described species within this genus. Based on the results herein reported, the new South-American species Paraboeremia yungensis is described and proposed.

scholarly journals Description of Lepiotaceous Fungal Species of the Genera Chlorophyllum, Clarkeinda, Macrolepiota, Pseudolepiota, and Xanthagaricus, from Laos and Thailand

Diversity ◽  
2021 ◽  
Vol 13 (12) ◽  
pp. 666
Author(s):  
Phongeun Sysouphanthong ◽  
Naritsada Thongklang ◽  
Jian-Kui Liu ◽  
Else C. Vellinga
Keyword(s):  
Rna Polymerase ◽  
Rna Polymerase Ii ◽  
Internal Transcribed Spacer ◽  
Phylogenetic Analyses ◽  
Large Subunit ◽  
Fungal Species ◽  
Ongoing Research ◽  
Line Drawings ◽  
Dna And Rna ◽  
First Time

In our ongoing research on lepiotaceous taxa (Agaricaceae s.l.) in Laos and northern Thailand, we focus here on Chlorophyllum, Clarkeinda, Macrolepiota, Pseudolepiota, and Xanthagaricus. Collections were obtained from various habitats, including agricultural habitats, grasslands, and rainforests. A total of 12 taxa were examined and investigated. Of these 12, two are new for science; viz. Xanthagaricus purpureosquamulosus with brownish-grey to violet-brown squamules on a pale-violet to violet background; it shares the pileus color with X. caeruleus and X. ianthinus, but differs in other characters; and Macrolepiota excelsa, rather similar to M. procera but related toM. detersa. Two species, Pseudolepiota zangmui and Xanthagaricus necopinatus are recorded for the first time in Thailand. Four species of Chlorophyllum and a total of four species of Macrolepiota were found, viz., C. demangei and C. hortense with white basidiospores, C. molybdites and C. globosum with green basidiospores, M. detersa, M. dolichaula, the new M. excelsa, and M. velosa. Another rather common striking species is Clarkeinda trachodes, with yellow-green basidiospores. Each species is described in detail, with color photographs and line drawings. Phylogenetic analyses based on internal transcribed spacer (nrITS) region, the large subunit nuclear ribosomal (nrLSU) DNA and RNA polymerase II second largest subunit (rpb2) genes provide evidence for the placement of the species covered.

scholarly journals First Report of a Leaf Blight Caused by Pyricularia pennisetigena on Cenchrus echinatus in Paraguay

Plant Disease ◽  
2021 ◽  
Author(s):  
Cinthia C. Cazal-Martínez ◽  
Yessica Magaliz Reyes Caballero ◽  
Alice Chávez ◽  
Pastor Enmanuel Pérez Estigarribia ◽  
Alcides Rojas ◽  
...  
Keyword(s):  
Rna Polymerase Ii ◽  
Large Subunit ◽  
Fungal Species ◽  
Leaf Blight ◽  
Internal Transcribed Spacers ◽  
Conidial Suspension ◽  
Sterile Water ◽  
Potential Threat ◽  
First Report ◽  
Microscopic Features

The genus Pyricularia contains several fungal species known to cause diseases on plants in the Poaceae family (Klaubauf et al. 2014; Wang et al. 2019). While sampling for P. oryzae during March-2015 and April-2018, common weed Cenchrus echinatus L. was observed with leaf lesions in and around experimental wheat fields in the departments of Canindeyú and Itapúa. C. echinatus samples from both locations displayed similar leaf lesions, varying from small light brown pinpoint to elliptical brown lesions with greyish center. Symptomatic leaves were surface disinfested and cultured on potato dextrose agar (PDA) amended with 1% gentamicin at 25°C. Two monosporic isolates were obtained, one from Itapúa (ITCeh117) and the other from Canindeyú (YCeh55). The isolates were subsequently grown on oatmeal agar (OA) and PDA under a 12-h photoperiod at 25°C and evaluated after ten days for colony diameter, sporulation, macroscopic and microscopic features. Colonies on OA reached up to 4.8 cm diameter and were light grey, whereas colonies on PDA reached up to 5.3 cm diameter and were brown with grey centers, with cottony mycelium and broad white rims. Mycelium consisted of smooth, hyaline, branched, septate hyphae 4-4.5 µm diameter. Conidiophores were erect, straight or curved, unbranched, medium brown and smooth. Conidia were solitary, pyriform, pale brown, smooth, granular, 2-septate, 32-33 × 9-10 μm; truncated with protruding hilum and varied in length from 1.0 to 1.5 μm and diameters from 2.0 to 2.2 μm. Both isolates were similar and identified as Pyricularia pennisetigena, according to morphological and morphometric characteristics (Klaubauf et al. 2014). Subsequently, genomic DNA was extracted from each isolate using the primers described in Klaubauf et al. (2014) to amplify and sequence the internal transcribed spacers (ITS), partial large subunit (LSU), partial RNA polymerase II large subunit gene (RPB1), partial actin gene (ACT), and partial calmodulin gene (CAL). Sequences from each isolate (YCeh55/ITCeh117) were deposited in GenBank with the following submission ID for ITS: MN947521/MN947526, RPB1: MN984710/MN984715, LSU: MN944829/MN944834, ACT: MN917177/MN917182, and CAL: MN984688/MN984693. Phylogenetic analysis was conducted using the software Beast v1.10.4. The results obtained from the concatenated matrix of the five loci placed these isolates in the P. pennisetigena clade. To confirm pathogenicity, each isolate was adjusted to 5×104 conidia/ml of sterile water and C. echinatus plants were sprayed with the conidial suspension for isolate YCeh55, ITCeh117 or sterile water using an oilless airbrush sprayer until runoff. The three treatments were kept in the greenhouse at 25-28°C and about 75% relative humidity under natural daylight. Each treatment included three to five inoculated plants and 10 leaves were evaluated per treatment. Symptoms were observed 8-15 days after inoculation and were similar to those originally observed in the field for both isolates, whereas the control plants remained asymptomatic. P. pennisetigena was re-isolated from the inoculated leaves fulfilling Koch’s postulates. To our knowledge, this is the first report of leaf blight on C. echinatus caused by P. pennisetigena in Paraguay. The occurrence of P. pennisetigena in the region and its ability to infect economically important crops such as wheat and barley (Klaubauf et al. 2014; Reges et al., 2016, 2018) pose a potential threat to agriculture in Paraguay.

scholarly journals Multilocus phylogenies reveal three new truffle-like taxa and the traces of interspecific hybridization in Octaviania (Boletaceae, Boletales)

IMA Fungus ◽  
2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Takamichi Orihara ◽  
Rosanne Healy ◽  
Adriana Corrales ◽  
Matthew E. Smith
Keyword(s):  
Rna Polymerase Ii ◽  
Phylogenetic Analyses ◽  
Large Subunit ◽  
Gene Tree ◽  
Phylogenetic Network ◽  
Elongation Factor ◽  
Morphological Observation ◽  
Tree Comparison ◽  
Unknown Species ◽  
The Usa

ABSTRACTAmong many convergently evolved sequestrate fungal genera in Boletaceae (Boletales, Basidiomycota), the genus Octaviania is the most diverse. We recently collected many specimens of Octaviania subg. Octaviania, including several undescribed taxa, from Japan and the Americas. Here we describe two new species in subgenus Octaviania, O. tenuipes and O. tomentosa, from temperate to subtropical evergreen Fagaceae forests in Japan based on morphological observation and robust multilocus phylogenetic analyses (nrDNA ITS and partial large subunit [LSU], translation elongation factor 1-α gene [TEF1] and the largest subunit of RNA polymerase II gene [RPB1]). Based on specimens from the Americas as well as studies of the holotype, we also taxonomically re-evaluate O. asterosperma var. potteri. Our analysis suggests that O. asterosperma var. potteri is a distinct taxon within the subgenus Octaviania so we recognize this as O. potteri stat. nov. We unexpectedly collected O. potteri specimens from geographically widespread sites in the USA, Japan and Colombia. This is the first verified report of Octaviania from the South American continent. Our molecular analyses also revealed that the RPB1 sequence of one O. tenuipes specimen was identical to that of a closely related species, O. japonimontana, and that one O. potteri specimen from Minnesota had an RPB1 sequence of an unknown species of O. subg. Octaviania. Additionally, one O. japonimontana specimen had an unusually divergent TEF1 sequence. Gene-tree comparison and phylogenetic network analysis of the multilocus dataset suggest that these heterogenous sequences are most likely the result of previous inter- and intra-specific hybridization. We hypothesize that frequent hybridization events in Octaviania may have promoted the high genetic and species diversity found within the genus.

scholarly journals Effects of Natural Antioxidants on Phospholipid and Ceramide Profiles of 3D-Cultured Skin Fibroblasts Exposed to UVA or UVB Radiation

Antioxidants ◽  
2021 ◽  
Vol 10 (4) ◽  
pp. 578
Author(s):  
Agnieszka Gęgotek ◽  
Wojciech Łuczaj ◽  
Elżbieta Skrzydlewska
Keyword(s):  
Ascorbic Acid ◽  
High Performance ◽  
Three Dimensional ◽  
Natural Antioxidants ◽  
Phospholipid Metabolism ◽  
Culture Conditions ◽  
Membrane Properties ◽  
Dimensional System ◽  
Uvb Radiation ◽  
Liquid Chromatograph

Ultraviolet (UV) radiation is one of the primary factors responsible for disturbances in human skin cells phospholipid metabolism. Natural compounds that are commonly used to protect skin, due to their lipophilic or hydrophilic nature, show only a narrow range of cytoprotective activity, which prompts research on their combined application. Therefore, the aim of this study was to examine the effect of ascorbic acid and rutin on the phospholipid and ceramide profiles in UV-irradiated fibroblasts cultured in a three-dimensional system that approximates the culture conditions to the dermis. An ultra-high-performance liquid chromatograph coupled with a quadrupole time-of-flight mass spectrometer was used for phospholipid and ceramide profiling. As a result of UVA and UVB cells irradiation, upregulation of phosphatidylcholines, ceramides, and downregulation of sphingomyelins were observed, while treatment with ascorbic acid and rutin of UVA/UVB-irradiated fibroblast promoted these changes to provide cells a stronger response to stress. Moreover, an upregulation of phosphatidylserines in cells exposed to UVB and treated with both antioxidants suggests the stimulation of UV-damaged cells apoptosis. Our findings provide new insight into action of rutin and ascorbic acid on regulation of phospholipid metabolism, which improves dermis fibroblast membrane properties.

scholarly journals Maculansins, Cryptic Phytotoxins from Blackleg Fungi

2011 ◽  
Vol 6 (5) ◽  
pp. 1934578X1100600
Author(s):  
M. Soledade C. Pedras ◽  
Paulos B. Chumala
Keyword(s):  
Leptosphaeria Maculans ◽  
Culture Conditions ◽  
Fungal Species ◽  
Metabolic Characteristics ◽  
The Common

The phytotoxins and other metabolites produced by isolates L2/M2 of the fungal species Leptosphaeria maculans under different culture conditions, together with those of two new, but related isolates are disclosed. The common metabolic characteristics suggest a phylogenetic similarity between these isolates with potential to become widespread in mustard growing areas.

scholarly journals To separate or not to separate: what is necessary and enough for a green and sustainable extraction of bioactive compounds from Brazilian citrus waste

2020 ◽  
Vol 0 (0) ◽  
Author(s):  
Vânia G. Zuin ◽  
Luize Z. Ramin ◽  
Mateus L. Segatto ◽  
Aylon M. Stahl ◽  
Karine Zanotti ◽  
...  
Keyword(s):  
High Performance ◽  
Orange Peel ◽  
Solvent Ratio ◽  
Biomass Waste ◽  
Chemical Profiles ◽  
Orange Waste ◽  
Sustainable Materials ◽  
Citrus Waste ◽  
Sustainable Extraction

AbstractIncreasing demands to obtain chemicals via greener and more sustainable materials and processes introduces concepts that should be considered and applied from lab to larger scales. Obtaining bioactive chemicals from agro-industrial non-food biomass waste can combine benign techniques and bio-circular economy to reach this goal. After extraction, evaluating profitability and environmental impacts to decide whether separation – and to what extent – is necessary or not is indispensable. This could be integrated into an approach known as sufficiency, as an important criterion for sustainability. From this perspective, Brazil’s annual generation of 8 million tons of orange waste is relevant, since citrus waste has large amounts of high-value compounds, such as pectin, d-limonene and flavonoids. This case study aimed at developing and comparing green and sustainable analytical methods to obtain flavonoids from orange peel. Homogenizer, ultrasound and microwave-assisted extractions were employed using chemometric tools, considering time, sample/solvent ratio, temperature and ethanol concentration as variables to obtain extracts containing hesperidin, naringenin, hesperetin and nobiletin. The bioactive flavonoids were determined by high-performance liquid chromatography (HPLC-UV). Microwave extraction was the most efficient method for obtaining the majority of flavonoids studied, six times more for hesperidin. Moreover, orange waste from different farming models showed diverse chemical profiles showing the importance of this alternative in natural product resources.

Morphology of Rigid-Rod Molecular Composites: An Overview

1988 ◽  
Vol 134 ◽  
Author(s):  
Stephen J. Krause
Keyword(s):  
Mechanical Properties ◽  
High Performance ◽  
Morphological Characterization ◽  
High Ratio ◽  
Structure Property ◽  
Chain Polymer ◽  
Specific Strength ◽  
Composite Systems ◽  
Molecular Composites ◽  
Rigid Rod

ABSTRACTRigid-rod molecular composites are a new class of high performance structural polymers which have high specific strength and modulus and also high thermal and environmental resistance. A rigid-rod, extended chain polymer component is used to reinforce a matrix of a ductile polymer with the intent of achieving a “composite” on the molecular level. After synthesis, the key to producing a molecular composite is to control morphology to disperse the reinforcing rod molecules as finely as possible in the matrix polymer. Individual rod molecules or bundles of molecular rods must have dimensions which result in a high ratio of length to width (aspect ratio) for efficient reinforcement. To achieve this, the reinforcing rod component must not phase separate at any stage of processing. Morphological characterization techniques, which can measure the orientation and dispersion (or, conversely, the degree of phase separation) of rod molecules provide the tools for correlating theoretically predicted and experimentally observed mechanical properties. Various morphological techniques which have been applied to molecular composite systems will be reviewed, including wide angle x-ray scattering and scanning and transmission electron microscopy. Structure-property correlations for molecular composite systems will be discussed with regard to models for mechanical properties. Application of new morphological techniques will also be discussed.

A polyphasic approach to characterise two novel species of Phoma (Didymellaceae) from China

Phytotaxa ◽  
2015 ◽  
Vol 197 (4) ◽  
pp. 267-281 ◽  
Author(s):  
Qian Chen ◽  
KE ZHANG ◽  
GUOZHEN ZHANG ◽  
LEI CAI
Keyword(s):  
Rna Polymerase Ii ◽  
Internal Transcribed Spacer ◽  
Novel Species ◽  
Large Subunit ◽  
Morphological Characteristics ◽  
Polyphasic Approach ◽  
Nrdna Its ◽  
Two New Species ◽  
Viburnum Odoratissimum ◽  
Β Tubulin

Phoma odoratissimi sp. nov. on Viburnum odoratissimum and Syringa oblate, and Phoma segeticola sp. nov. on Cirsium segetum from China are introduced and described, employing a polyphasic approach characterising morphological characteristics, host association and phylogeny. Both species are the first records of Phoma species on their respective hosts. Multi-locus phylogenetic tree was inferred using combined sequences of the internal transcribed spacer regions 1 & 2 and 5.8S nrDNA (ITS), and partial large subunit 28S nrDNA region (LSU), β-tubulin (TUB) region and RNA polymerase II (RPB2) region. The two new species clustered in two separate and distinct lineages, and are distinct from their allied species.

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