scholarly journals Selection for environmental variance of litter size in rabbits involves genes in pathways controlling animal resilience

2021 ◽  
Vol 53 (1) ◽  
Author(s):  
Cristina Casto-Rebollo ◽  
María José Argente ◽  
María Luz García ◽  
Agustín Blasco ◽  
Noelia Ibáñez-Escriche
Keyword(s):  
Stress Response ◽  
Litter Size ◽  
Molecular Mechanisms ◽  
Base Population ◽  
Environmental Variance ◽  
Functional Mutation ◽  
Carbohydrate And Lipid Metabolism ◽  
Signatures Of Selection ◽  
Selection For ◽  
Functional Analyses

Abstract Background Environmental variance (VE) is partially under genetic control, which means that the VE of individuals that share the same environment can differ because they have different genotypes. Previously, a divergent selection experiment for VE of litter size (LS) during 13 generations in rabbit yielded a successful response and revealed differences in resilience between the divergent lines. The aim of the current study was to identify signatures of selection in these divergent lines to better understand the molecular mechanisms and pathways that control VE of LS and animal resilience. Three methods (FST, ROH and varLD) were used to identify signatures of selection in a set of 473 genotypes from these rabbit lines (377) and a base population (96). A whole-genome sequencing (WGS) analysis was performed on 54 animals to detect genes with functional mutations. Results By combining signatures of selection and WGS data, we detected 373 genes with functional mutations in their transcription units, among which 111 had functions related to the immune system, stress response, reproduction and embryo development, and/or carbohydrate and lipid metabolism. The genes TTC23L, FBXL20, GHDC, ENSOCUG00000031631, SLC18A1, CD300LG, MC2R, and ENSOCUG00000006264 were particularly relevant, since each one carried a functional mutation that was fixed in one of the rabbit lines and absent in the other line. In the 3ʹUTR region of the MC2R and ENSOCUG00000006264 genes, we detected a novel insertion/deletion (INDEL) variant. Conclusions Our findings provide further evidence in favour of VE as a measure of animal resilience. Signatures of selection were identified for VE of LS in genes that have a functional mutation in their transcription units and are mostly implicated in the immune response and stress response pathways. However, the real implications of these genes for VE and animal resilience will need to be assessed through functional analyses.

scholarly journals Selection for environmental variance of litter size in rabbits

2017 ◽  
Vol 49 (1) ◽  
Author(s):  
Agustín Blasco ◽  
Marina Martínez-Álvaro ◽  
Maria-Luz García ◽  
Noelia Ibáñez-Escriche ◽  
María-José Argente
Keyword(s):  
Litter Size ◽  
Environmental Variance ◽  
Selection For

ESTIMASI NILAI HERITABILITAS BOBOT IKAN MAS VARIETAS PUNTEN DALAM PROGRAM SELEKSI INDIVIDU

2016 ◽  
Vol 11 (3) ◽  
pp. 217
Author(s):  
Estu Nugroho ◽  
Budi Setyono ◽  
Mochammad Su’eb ◽  
Tri Heru Prihadi
Keyword(s):  
Body Weight ◽  
Selection Response ◽  
Base Population ◽  
Breeding Programs ◽  
Male And Female ◽  
Body Weight Trait ◽  
Population Selection ◽  
Selection For ◽  
Weight Trait ◽  
Selection Of

Program pemuliaan ikan mas varietas Punten dilakukan dengan seleksi individu terhadap karakter bobot ikan. Pembentukan populasi dasar untuk kegiatan seleksi dilakukan dengan memijahkan secara massal induk ikan mas yang terdiri atas 20 induk betina dan 21 induk jantan yang dikoleksi dari daerah Punten, Kepanjen (delapan betina dan enam jantan), Kediri (tujuh betina dan 12 jantan), Sragen (27 betina dan 10 jantan), dan Blitar (15 betina dan 11 jantan). Larva umur 10 hari dipelihara selama empat bulan. Selanjutnya dilakukan penjarangan sebesar 50% dan benih dipelihara selama 14 bulan untuk dilakukan seleksi dengan panduan hasil sampling 250 ekor individu setiap populasi. Seleksi terhadap calon induk dilakukan saat umur 18 bulan pada populasi jantan dan betina secara terpisah dengan memilih berdasarkan 10% bobot ikan yang terbaik. Calon induk yang terseleksi kemudian dipelihara hingga matang gonad, kemudian dipilih sebanyak 150 pasang dan dipijahkan secara massal. Didapatkan respons positif dari hasil seleksi berdasarkan bobot ikan, yaitu 49,89 g atau 3,66% (populasi ikan jantan) dan 168,47 g atau 11,43% (populasi ikan betina). Nilai heritabilitas untuk bobot ikan adalah 0,238 (jantan) dan 0,505 (betina).Punten carp breeding programs were carried out by individual selection for body weight trait. The base population for selection activities were conducted by mass breeding of parent consisted of 20 female and 21 male collected from area Punten, eight female and six male (Kepanjen), seven female and 12 male (Kediri), 27 female and 10 male (Sragen), 15 female and 11 male (Blitar). Larvae 10 days old reared for four moths. Then after spacing out 50% of total harvest, the offspring reared for 14 months for selection activity based on the sampling of 250 individual each population. Selection of broodstock candidates performed since 18 months age on male and female populations separately by selecting based on 10% of fish with best body weight. Candidates selected broodstocks were then maintained until mature. In oder to produce the next generation 150 pairs were sets and held for mass spawning. The results revealed that selection response were positive, 49.89 g (3.66%) for male and 168.47 (11.43%) for female. Heritability for body weight is 0.238 (male) and 0.505 (female).

Correlated response to selection for litter size in pigs: II. Carcass, meat, and fat quality traits

2002 ◽  
Vol 80 (10) ◽  
pp. 2566 ◽  
Author(s):  
J. Estany ◽  
D. Villalba ◽  
M. Tor ◽  
D. Cubiló ◽  
J. L. Noguera
Keyword(s):  
Litter Size ◽  
Correlated Response ◽  
Quality Traits ◽  
Response To Selection ◽  
Fat Quality ◽  
Selection For

scholarly journals Overexpression of the Apple (Malus× domestica) MdERF100 in Arabidopsis Increases Resistance to Powdery Mildew

2021 ◽  
Vol 22 (11) ◽  
pp. 5713
Author(s):  
Yiping Zhang ◽  
Li Zhang ◽  
Hai Ma ◽  
Yichu Zhang ◽  
Xiuming Zhang ◽  
...  
Keyword(s):  
Stress Response ◽  
Powdery Mildew ◽  
Malus Domestica ◽  
Molecular Mechanisms ◽  
Powdery Mildew Resistance ◽  
Bimolecular Fluorescence Complementation ◽  
Bhlh Protein ◽  
Mildew Resistance ◽  
Sa Signaling

APETALA2/ETHYLENE RESPONSIVE FACTOR (AP2/ERF) transcription factors play important roles in plant development and stress response. Although AP2/ERF genes have been extensively investigated in model plants such as Arabidopsis thaliana, little is known about their role in biotic stress response in perennial fruit tree crops such as apple (Malus × domestica). Here, we investigated the role of MdERF100 in powdery mildew resistance in apple. MdERF100 localized to the nucleus but showed no transcriptional activation activity. The heterologous expression of MdERF100 in Arabidopsis not only enhanced powdery mildew resistance but also increased reactive oxygen species (ROS) accumulation and cell death. Furthermore, MdERF100-overexpressing Arabidopsis plants exhibited differential expressions of genes involved in jasmonic acid (JA) and salicylic acid (SA) signaling when infected with the powdery mildew pathogen. Additionally, yeast two-hybrid and bimolecular fluorescence complementation assays confirmed that MdERF100 physically interacts with the basic helix–loop–helix (bHLH) protein MdbHLH92. These results suggest that MdERF100 mediates powdery mildew resistance by regulating the JA and SA signaling pathways, and MdbHLH92 is involved in plant defense against powdery mildew. Overall, this study enhances our understanding of the role of MdERF genes in disease resistance, and provides novel insights into the molecular mechanisms of powdery mildew resistance in apple.

scholarly journals Polygenic and single gene responses to selection for resistance to diazinon in Lucilia cuprina.

Genetics ◽  
1992 ◽  
Vol 130 (3) ◽  
pp. 613-620 ◽  
Author(s):  
J A McKenzie ◽  
A G Parker ◽  
J L Yen
Keyword(s):  
Resistant Strain ◽  
Single Gene ◽  
Natural Populations ◽  
Susceptible Strain ◽  
Selection Line ◽  
Base Population ◽  
Gene Response ◽  
Biochemical Profiles ◽  
Resistant Strains ◽  
Selection For

Abstract Following mutagenesis with ethyl methanesulfonate, selection in a susceptible strain with a concentration of the insecticide diazinon (0.0004%, w/v) above that required to kill 100% of the susceptible strain, the LC100 of that strain, resulted in a single gene response. The resultant four mutant resistant strains have equivalent physiological, genetical and biochemical profiles to a diazinon-resistant strain derived from a natural population and homozygous for the Rop-1 allele. Modification of the microsomal esterase E3 is responsible for resistance in each case. The Rop-1 locus maps approximately 4.4 map units proximal to bu on chromosome IV. Selection within the susceptible distribution, at a concentration of diazinon [0.0001% (w/v)] less than the LC100, resulted in a similar phenotypic response irrespective of whether the base population had been mutagenized. The responses were polygenically based, unique to each selection line and independent of Rop-1. The relevance of the results to selection for insecticide resistance in laboratory and natural populations is discussed.

scholarly journals Impact of Carcinogenic Chromium on the Cellular Response to Proteotoxic Stress

2019 ◽  
Vol 20 (19) ◽  
pp. 4901 ◽  
Author(s):  
Leonardo M. R. Ferreira ◽  
Teresa Cunha-Oliveira ◽  
Margarida C. Sobral ◽  
Patrícia L. Abreu ◽  
Maria Carmen Alpoim ◽  
...  
Keyword(s):  
Stress Response ◽  
Health Effects ◽  
Cellular Response ◽  
Molecular Mechanisms ◽  
Critical Role ◽  
Chemical Properties ◽  
Adverse Health Effects ◽  
Proteotoxic Stress ◽  
Adverse Health ◽  
The Impact

Worldwide, several million workers are employed in the various chromium (Cr) industries. These workers may suffer from a variety of adverse health effects produced by dusts, mists and fumes containing Cr in the hexavalent oxidation state, Cr(VI). Of major importance, occupational exposure to Cr(VI) compounds has been firmly associated with the development of lung cancer. Counterintuitively, Cr(VI) is mostly unreactive towards most biomolecules, including nucleic acids. However, its intracellular reduction produces several species that react extensively with biomolecules. The diversity and chemical versatility of these species add great complexity to the study of the molecular mechanisms underlying Cr(VI) toxicity and carcinogenicity. As a consequence, these mechanisms are still poorly understood, in spite of intensive research efforts. Here, we discuss the impact of Cr(VI) on the stress response—an intricate cellular system against proteotoxic stress which is increasingly viewed as playing a critical role in carcinogenesis. This discussion is preceded by information regarding applications, chemical properties and adverse health effects of Cr(VI). A summary of our current understanding of cancer initiation, promotion and progression is also provided, followed by a brief description of the stress response and its links to cancer and by an overview of potential molecular mechanisms of Cr(VI) carcinogenicity.

scholarly journals Genetic correlation between traits in the ESALQ-PB1 maize population divergently selected for tassel size and ear height

2001 ◽  
Vol 58 (1) ◽  
pp. 119-123 ◽  
Author(s):  
Austeclínio Lopes Farias Neto ◽  
José Branco de Miranda Filho
Keyword(s):  
Genetic Correlation ◽  
Correlation Coefficients ◽  
Divergent Selection ◽  
Phenotypic Correlation ◽  
Base Population ◽  
Branch Number ◽  
Maize Population ◽  
Tassel Branch Number ◽  
Ear Height ◽  
Selection For

Full-sib and selfed (S1) progenies were obtained from sub-populations of ESALQ-PB1, divergently selected for tassel size (T+ and T-) and ear height (E+ and E-), and used for estimating genetic and phenotypic correlation coefficients between traits. The analyzed traits were: EW- total ear weight (g/plant), PH- plant height (cm), EH- ear height (cm), TB- tassel branch number and TL- tassel length. The highest genetic (rG) and phenotypic (rF) correlation was observed for the combination PH x EH, as expected, with average of 0.800 and 0.778, respectively over sub-populations and locations. It is apparent that divergent selection for tassel size did not affect greatly the correlation between PH and EH in the full sib progenies, but in the inbred progenies the correlation was smaller in the sub-population selected for larger tassels. Genetic correlation between PH and EH with tassel traits was always positive but ranged from 0.020 to 0.668 in Piracicaba and from 0.06 to 0.309 in Rio Verde. Genetic correlation between PH and EH with yield (EW) also was positive in the range of 0.087 to 0.503. EH showed higher correlation with EW in relation to PH x EW and differences were larger in the sub-populations divergently selected for ear height. Correlation between tassel traits with other traits was positive in most of instances and a lack of consistency was observed among sub-populations. Generally the coefficients of genetic and phenotypic correlation differed substantially from the estimates in the base population ESALQ-PB1 before divergent selection for tassel size and ear placement. Divergent selection affected the correlation between traits under unpredicted and varying magnitudes.

Selection and response within the nucleus of a sheep group-breeding scheme

1990 ◽  
Vol 51 (3) ◽  
pp. 593-599 ◽  
Author(s):  
S. Anderson ◽  
M. K. Curran
Keyword(s):  
Litter Size ◽  
Age Groups ◽  
Selection Response ◽  
Sheep Flock ◽  
Breeding Scheme ◽  
Average Value ◽  
Group Breeding ◽  
Selection For ◽  
Progeny Group ◽  
Selection Differentials

ABSTRACTAn evaluation of the response to selection for prolificacy within a nucleus sheep flock of a commercial group-breeding scheme is presented. In 1979, the Romney Group Breeders formed a nucleus flock of 120 prolific ewes chosen from 12 contributing flocks. A control flock was established in 1982 from the same source. The analysis was conducted on the trait of litter size. Selection differentials are presented for each year of birth progeny group in both flocks. Expected selection response was calculated from selection differentials and was found to have an average value of 1·5% of parent mean litter size per year. Using least squares procedures the litter size performance of control and nucleus ewes of 2, 3 and 4 years of age was corrected for environmental effects. Realized response was estimated from the differences between corrected litter size means of control and nucleus flocks. Response in litter size was found to be significant within years and within ewe age groups (P < 0·05).

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