scholarly journals Latent class distributional regression for the estimation of non-linear reference limits from contaminated data sources

2020 ◽  
Vol 21 (1) ◽  
Author(s):  
Tobias Hepp ◽  
Jakob Zierk ◽  
Manfred Rauh ◽  
Markus Metzler ◽  
Andreas Mayr

Abstract Background Medical decision making based on quantitative test results depends on reliable reference intervals, which represent the range of physiological test results in a healthy population. Current methods for the estimation of reference limits focus either on modelling the age-dependent dynamics of different analytes directly in a prospective setting or the extraction of independent distributions from contaminated data sources, e.g. data with latent heterogeneity due to unlabeled pathologic cases. In this article, we propose a new method to estimate indirect reference limits with non-linear dependencies on covariates from contaminated datasets by combining the framework of mixture models and distributional regression. Results Simulation results based on mixtures of Gaussian and gamma distributions suggest accurate approximation of the true quantiles that improves with increasing sample size and decreasing overlap between the mixture components. Due to the high flexibility of the framework, initialization of the algorithm requires careful considerations regarding appropriate starting weights. Estimated quantiles from the extracted distribution of healthy hemoglobin concentration in boys and girls provide clinically useful pediatric reference limits similar to solutions obtained using different approaches which require more samples and are computationally more expensive. Conclusions Latent class distributional regression models represent the first method to estimate indirect non-linear reference limits from a single model fit, but the general scope of applications can be extended to other scenarios with latent heterogeneity.

2014 ◽  
Vol 138 (12) ◽  
pp. 1564-1577 ◽  
Author(s):  
Fan Lin ◽  
Zongming Chen

Context Immunohistochemistry has become an indispensable ancillary technique in anatomic pathology laboratories. Standardization of every step in preanalytic, analytic, and postanalytic phases is crucial to achieve reproducible and reliable immunohistochemistry test results. Objective To standardize immunohistochemistry tests from preanalytic, analytic, to postanalytic phases. Data Sources Literature review and Geisinger (Geisinger Medical Center, Danville, Pennsylvania) experience. Conclusions This review article delineates some critical points in preanalytic, analytic, and postanalytic phases; reiterates some important questions, which may or may not have a consensus at this time; and updates the newly proposed guidelines on antibody validation from the College of American Pathologists Pathology and Laboratory Quality Center. Additionally, the article intends to share Geisinger's experience with (1) testing/optimizing a new antibody and troubleshooting; (2) interpreting and reporting immunohistochemistry assay results; (3) improving and implementing a total immunohistochemistry quality management program; and (4) developing best practices in immunohistochemistry.


Author(s):  
Aurélie Francois ◽  
Sandy Maumus ◽  
Monique Vincent-Viry ◽  
René Guéguen ◽  
Gérard Siest ◽  
...  

AbstractInsulin is involved in coronary heart disease through diabetes and metabolic syndrome. A great deal is known about insulin and its correlates, as well as factors related to changes in insulin. However, few studies consider the broad variety of correlates simultaneously. Therefore, the aims of the present study were to characterize the main factors of biological variation affecting serum insulin concentration and to establish reference limits of insulinemia in a presumably healthy French population. Insulin was measured using a microparticular enzymatic immunoassay. A total of 646 subjects aged 11–58 years from the STANISLAS cohort and divided into four groups of 162 males, 157 females, 163 boys and 164 girls, were included in the statistical analyses. In the whole population, serum insulin concentration varied from 0.80 to 54.60 µU/ml. Significant factors affecting insulin were age, gender, body mass index and glucose, in addition to alanine aminotransferase and high-density lipoprotein cholesterol in men, triglycerides and oral contraceptive use in women, and alkaline phosphatase in girls.In summary, we presented biological correlates of insulin in both healthy French male and female adults and children/adolescents and determined reference limits for insulin for each group. These results will contribute to a better interpretation of insulin data in further studies and laboratory investigations.


2006 ◽  
Vol 130 (5) ◽  
pp. 613-616 ◽  
Author(s):  
Roger E. McLendon

Abstract Context.—A significant difficulty that pathologists encounter in arriving at a correct diagnosis is related to the way information from various sources is processed and assimilated in context. Objective.—These issues are addressed by the science of cognitive psychology. Although cognitive biases are the focus of a number of studies on medical decision making, few if any focus on the visual sciences. Data Sources.—A recent publication authored by Richards Heuer, Jr, The Psychology of Intelligence Analysis, directly addresses many of the cognitive biases faced by neuropathologists and anatomic pathologists in general. These biases include visual anticipation, first impression, and established mindsets and subconsciously influence our critical decision-making processes. Conclusions.—The book points out that while biases are an inherent property of cognition, the influence of such biases can be recognized and the effects blunted.


2021 ◽  
Vol 153 (A2) ◽  
Author(s):  
R P Dallinga ◽  
R H M Huijsmans

Historically “scale effects” in the interpretation of tests with scale models in waves using Froude’s Law of Similitude are mostly associated with viscous effects. Nowadays, with a much more complete modelling of reality and a focus on higher order non-linear phenomena, scaling of model test results implies a wider range of assumptions than the validity of Froude’s Law. Our contribution to the conference is a visionary review of contemporary and future problems in the interpretation of these tests. In this context we will discuss the developments in test techniques, including the development of a new Two-Phase Laboratory facilitating seakeeping and sloshing tests at reduced air pressure.


2015 ◽  
Vol 656-657 ◽  
pp. 694-699
Author(s):  
Xin Liao ◽  
Jian Run Zhang ◽  
Dong Lu

In this study, a non-linear finite element model for a simplified single-bolted joint structure model is built. Static analysis on the structure under different shear force and pretension effect is done, and the non-linear contact behavior is analyzed. Through comparing datum, it is found that interface area of each bolted joint region can be described an annular region around bolt hole, whose outer radius has increased by 85% compared with radius of bolt hole. Also, the frequency responses of the multi-bolted joint structure under sinusoidal excitation are investigated. Simulation results show that the resonance regions basically remain unchanged in different pretension effect and the largest amplitude will increase with the increasing preloads. Finally, the vibration experiments are conducted. Interface nonlinear affect dynamic stiffness considerably. The test results illustrate that dynamic behaviors of bolted joint agree with the simulation results and the proposed non-linear contact model was reasonable.


Repositor ◽  
2020 ◽  
Vol 2 (4) ◽  
pp. 463
Author(s):  
Rendiyono Wahyu Saputro ◽  
Aminuddin Aminuddin ◽  
Yuda Munarko

AbstrakPerkembangan teknologi telah mengakibatkan pertumbuhan data yang semakin cepat dan besar setiap waktunya. Hal tersebut disebabkan oleh banyaknya sumber data seperti mesin pencari, RFID, catatan transaksi digital, arsip video dan foto, user generated content, internet of things, penelitian ilmiah di berbagai bidang seperti genomika, meteorologi, astronomi, fisika, dll. Selain itu, data - data tersebut memiliki karakteristik yang unik antara satu dengan lainnya, hal ini yang menyebabkan tidak dapat diproses oleh teknologi basis data konvensional.Oleh karena itu, dikembangkan beragam framework komputasi terdistribusi seperti Apache Hadoop dan Apache Spark yang memungkinkan untuk memproses data secara terdistribusi dengan menggunakan gugus komputer.Adanya ragam framework komputasi terdistribusi, sehingga diperlukan sebuah pengujian untuk mengetahui kinerja komputasi keduanya. Pengujian dilakukan dengan memproses dataset dengan beragam ukuran dan dalam gugus komputer dengan jumlah node yang berbeda. Dari semua hasil pengujian, Apache Hadoop memerlukan waktu yang lebih sedikit dibandingkan dengan Apache Spark. Hal tersebut terjadi karena nilai throughput dan throughput/node Apache Hadoop lebih tinggi daripada Apache Spark.AbstractTechnological developments have resulted in rapid and growing data growth every time. This is due to the large number of data sources such as search engines, RFID, digital transaction records, video and photo archives, user generated content, internet of things, scientific research in areas such as genomics, meteorology, astronomy, physics, In addition, these data have unique characteristics of each other, this is the cause can not be processed by conventional database technology. Therefore, developed various distributed computing frameworks such as Apache Hadoop and Apache Spark that enable to process data in a distributed by using computer cluster.The existence of various frameworks of distributed computing, so required a test to determine the performance of both computing. Testing is done by processing datasets of various sizes and in clusters of computers with different number of nodes. Of all the test results, Apache Hadoop takes less time than the Apache Spark. This happens because the value of throuhgput and throughput / node Apache Hadoop is higher than Apache Spark.


2020 ◽  
Vol 5 (1) ◽  
pp. 84
Author(s):  
Gine Das Prena ◽  
Reynaldi Mulyana Kusmawan

This study aims to determine whether the understanding of Risk Based Internal Audit, Whistleblowing System, anti-fraud awareness, and the application of the principles of Good Corporate Governance affect the prevention of fraud in Rural Credit Banks in Bali Province. This study uses primary data sources, using instruments in the form of questionnaires. The population used in this study were auditor internal and bord of directors from 134 Rural Credit Banks and the sample used was auditor internal from 57 Rural Credit Banks taken purposive sampling. The analytical method used is quantitative analysis that is multiple linear analysis using SPSS test equipment. t test results show that Risk Based  Internal Audit, Whistleblowing System, Anti-Fraud awareness, and the application of the principles of Good Corporate Governance each have a positive effect on Fraud prevention


2011 ◽  
Vol 7 (2) ◽  
Author(s):  
Terry Sefton ◽  
Sheila Windle

In this paper we argue that a multimedia composition of various data sources is an ideal and appropriate medium for conveying the complex, context-specific, teacher-directed, multi-layered, non-linear nature of collaborative action research (CAR). This compilation also expresses the main outcomes of eight CAR studies conducted by eight teams of teacher-researchers in southwestern Ontario during 2007-2008.


2014 ◽  
Vol 59 (05) ◽  
pp. 1450045 ◽  
Author(s):  
SHEUE LI ONG ◽  
CHONG MUN HO

The untested assumption of linear relationship between stocks and bonds in previous empirical studies may lead to an invalid conclusion if the actual relationship is non-linear. The emphasis of this paper is on the effect of non-linearities on causal relationships between stocks and bonds in the cases of Malaysia and Singapore. Results from linearity tests indicate the existence of non-linearities in the dynamic relationship between stocks and bonds. Non-linear causality test results based on Taylor expansion suggest that non-linear causality flows from stocks to bonds and vice versa. The test further confirms that bonds with different maturity dates have different relationships with stocks.


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