scholarly journals  Resistance of Arabidopsis thaliana to the obligate biotrophic parasite Plasmodiophora brassicae

2017 ◽  
Vol 38 (SI 2 - 6th Conf EFPP 2002) ◽  
pp. 519-522 ◽  
Author(s):  
A. Arbeiter ◽  
M. Fähling ◽  
H. Graf ◽  
M.D. Sacristán ◽  
J. Siemens

Two resistance phenotypes to P. brassicae have been found in A. thaliana. A first resistance phenotype has been detected to the isolate 'e<sub>2</sub>' and is polygenically inherited. The second resistance to isolate 'e<sub>3</sub>' is caused by the dominant resistance gene RPB1. By crossing no influence could be shown for salicylic acid, jasmonic acid and ethylene in the latter resistance reaction. The RPB1 locus was narrowed down to 71 kb on chromosome 1, where three pseudogenes and 13 coding sequences are located. Six of them showed cosegregation with RPB1. None of these sequences have similarities to identified resistance genes or other known genes. Ten coding sequences were expressed, but CDS9 was exclusively expressed in the resistant ecotype Tsu-0.

2017 ◽  
Vol 59 (1) ◽  
pp. 8-16 ◽  
Author(s):  
Shigeyuki Betsuyaku ◽  
Shinpei Katou ◽  
Yumiko Takebayashi ◽  
Hitoshi Sakakibara ◽  
Nobuhiko Nomura ◽  
...  

Plant Science ◽  
2020 ◽  
Vol 300 ◽  
pp. 110635
Author(s):  
Yajun Liu ◽  
Ming Li ◽  
Tongtong Li ◽  
Yujie Chen ◽  
Lingjie Zhang ◽  
...  

2020 ◽  
Vol 16 ◽  
pp. 117693432091105
Author(s):  
Huawei Wei ◽  
Jia Liu ◽  
Qinwei Guo ◽  
Luzhao Pan ◽  
Songlin Chai ◽  
...  

NBS-LRR (nucleotide-binding site and leucine-rich repeat) is one of the largest resistance gene families in plants. The completion of the genome sequencing of wild tomato Solanum pimpinellifolium provided an opportunity to conduct a comprehensive analysis of the NBS-LRR gene superfamily at the genome-wide level. In this study, gene identification, chromosome mapping, and phylogenetic analysis of the NBS-LRR gene family were analyzed using the bioinformatics methods. The results revealed 245 NBS-LRRs in total, similar to that in the cultivated tomato. These genes are unevenly distributed on 12 chromosomes, and ~59.6% of them form gene clusters, most of which are tandem duplications. Phylogenetic analysis divided the NBS-LRRs into 2 subfamilies (CNL-coiled-coil NBS-LRR and TNL-TIR NBS-LRR), and the expansion of the CNL subfamily was more extensive than the TNL subfamily. Novel conserved structures were identified through conserved motif analysis between the CNL and TNL subfamilies. Compared with the NBS-LRR sequences from the model plant Arabidopsis thaliana, wide genetic variation occurred after the divergence of S. pimpinellifolium and A thaliana. Species-specific expansion was also found in the CNL subfamily in S. pimpinellifolium. The results of this study provide the basis for the deeper analysis of NBS-LRR resistance genes and contribute to mapping and isolation of candidate resistance genes in S. pimpinellifolium.


2007 ◽  
Vol 20 (12) ◽  
pp. 1512-1522 ◽  
Author(s):  
Joel M. Kniskern ◽  
M. Brian Traw ◽  
Joy Bergelson

Terrestrial plants serve as large and diverse habitats for a wide range of pathogenic and nonpathogenic microbes, yet these communities are not well described and little is known about the effects of plant defense on microbial communities in nature. We designed a field experiment to determine how variation in two plant defense signaling pathways affects the size, diversity, and composition of the natural endophytic and epiphytic bacterial communities of Arabidopsis thaliana. To do this, we provide an initial characterization of these bacterial communities in one population in southwestern Michigan, United States, and we compare these two communities among A. thaliana mutants deficient in salicylic acid (SA) and jasmonic acid (JA) signaling defense pathways, controls, and plants with artificially elevated levels of defense. We identified 30 distinct bacterial groups on A. thaliana that differ in colony morphology and 16S rRNA sequence. We show that induction of SA-mediated defenses reduced endophytic bacterial community diversity, whereas plants deficient in JA-mediated defenses experienced greater epiphytic bacterial diversity. Furthermore, there was a positive relationship between total community size and diversity, indicating that relatively susceptible plants should, in general, harbor higher bacterial diversity. This experiment provides novel information about the ecology of bacteria on A. thaliana and demonstrates that variation in two specific plant-signaling defense pathways can influence bacterial diversity on plants.


2015 ◽  
Vol 28 (10) ◽  
pp. 1142-1152 ◽  
Author(s):  
Vamsi J. Nalam ◽  
Syeda Alam ◽  
Jantana Keereetaweep ◽  
Barney Venables ◽  
Dehlia Burdan ◽  
...  

Fusarium graminearum causes Fusarium head blight, an important disease of wheat. F. graminearum can also cause disease in Arabidopsis thaliana. Here, we show that the Arabidopsis LOX1 and LOX5 genes, which encode 9-lipoxygenases (9-LOXs), are targeted during this interaction to facilitate infection. LOX1 and LOX5 expression were upregulated in F. graminearum–inoculated plants and loss of LOX1 or LOX5 function resulted in enhanced disease resistance in the corresponding mutant plants. The enhanced resistance to F. graminearum infection in the lox1 and lox5 mutants was accompanied by more robust induction of salicylic acid (SA) accumulation and signaling and attenuation of jasmonic acid (JA) signaling in response to infection. The lox1- and lox5-conferred resistance was diminished in plants expressing the SA-degrading salicylate hydroxylase or by the application of methyl-JA. Results presented here suggest that plant 9-LOXs are engaged during infection to control the balance between SA and JA signaling to facilitate infection. Furthermore, since silencing of TaLpx-1 encoding a 9-LOX with homology to LOX1 and LOX5, resulted in enhanced resistance against F. graminearum in wheat, we suggest that 9-LOXs have a conserved role as susceptibility factors in disease caused by this important fungus in Arabidopsis and wheat.


2018 ◽  
Vol 46 (1) ◽  
pp. 9
Author(s):  
Jia-San Zheng ◽  
Ting-Ting Zhu ◽  
Yun Liu ◽  
Ting Liu ◽  
Yan-Qing Li ◽  
...  

Background: To explore the epidemiology of bovine multidrug-resistant Escherichia coli isolates and resistance genes in Heilongjiang province of China. This study examined the prevalence of genes in bovine E. coli isolates, which confer resistance to antibiotics that are commonly used in the clinic, in regions of Baiquan, Shangzhi, and Songbei of Harbin. The purpose of the study was to investigate the epidemiology of the main resistance genes of bovine E. coli isolates in clinical veterinary medicine, and to provide a theoretical basis for preventing the spread of drug-resistant bacteria, as well as for rational drug use.Materials, Methods & Results: The sensitivity of 105 isolates to 22 antibiotics was determined using the KirbyBauer disk diffusion method, and the distribution of 19 kinds of common drug resistance genes was investigated using Polymerase Chain Reaction. The results showed that the resistance rate to nine antibiotics was over 50%, including rifampin (84.76%), ampicillin (73.58%), tetracycline (69.52%), and sulfisoxazole (59.05%). In total, 105 strains of bovine E. coli presented 21 spectra of drug resistance, including eight strains (7.62%, 8/105) that were resistant to one antibiotic and four strains (3.81%, 4/105) that were resistant to 21 antibiotics. The resistance gene detection results showed that the streptomycin-resistance gene strA was found in 73 isolates, accounting for 69.52% of the isolates, followed by the sulfanilamide-resistance genes sul3/sul2 and the aminoglycoside-resistance gene aphA, which accounted for 57.14%, 51.43%, and 50.48%, respectively, of the isolates.Discussion: This study revealed serious drug resistance of bovine E. coli isolates in some areas of Heilongjiang province. Of 105 E. coli isolates, more than 50% were resistant to the following antibacterial drugs: rifampicin, ampicillin, tetracycline, sulfisoxazole, and cephalothin. The isolates were the most sensitive to amikacin, with a sensitivity of 84.76%, followed by sensitivity to ofloxacin, ciprofloxacin, norfloxacin, cefoxitin, and tobramycin. Drug sensitivity tests showed that the drug resistance spectra of the bovine E. coli isolates was different in different regions, indicating that there were multidrug-resistant bovine E. coli isolates in different regions of Heilongjiang province, and that drug resistance differed among different regions. This may be due to prolonged use or overuse of antibiotics in a particular locality. Additionally, because of different management modes of livestock farms, the application of antimicrobial drugs in some farms may have imposed selective pressure on the intestinal flora including E. coli, resulting in the horizontal transmission of drug resistance among the bacteria. The study found that some strains had a resistance phenotype, but no resistance gene, while some had a resistance gene without expressing a resistance phenotype, which is consistent with relevant reports in the literature. This may be related to the same genotype corresponding to different resistance phenotypes, or different levels of gene expression, or different drug metabolic rates. In our study, some strains with certain drug resistance genes were sensitive to the corresponding drug, which may be due to mutations of drug-resistance genes, the loss of a strains resistance phenotype, or the loss of gene function. These issues require further study. This study revealed serious drug resistance of bovine E. coli isolates in some areas of Heilongjiang province. Of 105 E. coli isolates, more than 50% were resistant to the following antibacterial drugs: rifampicin, ampicillin, tetracycline, sulfisoxazole, and cephalothin. The isolates were the most sensitive to amikacin, with a sensitivity of 84.76%, followed by sensitivity to ofloxacin, ciprofloxacin, norfloxacin, cefoxitin, and tobramycin.


Horticulturae ◽  
2021 ◽  
Vol 8 (1) ◽  
pp. 9
Author(s):  
Regina Mencia ◽  
Elina Welchen ◽  
Susann Auer ◽  
Jutta Ludwig-Müller

The clubroot disease (Plasmodiophora brassicae) is one of the most damaging diseases worldwide among brassica crops. Its control often relies on resistant cultivars, since the manipulation of the disease hormones, such as salicylic acid (SA) alters plant growth negatively. Alternatively, the SA pathway can be increased by the addition of beneficial microorganisms for biocontrol. However, this potential has not been exhaustively used. In this study, a recently characterized protein Oxidation Resistant 2 (OXR2) from Arabidopsis thaliana is shown to increase the constitutive pathway of SA defense without decreasing plant growth. Plants overexpressing AtOXR2 (OXR2-OE) show strongly reduced clubroot symptoms with improved plant growth performance, in comparison to wild type plants during the course of infection. Consequently, oxr2 mutants are more susceptible to clubroot disease. P. brassicae itself was reduced in these galls as determined by quantitative real-time PCR. Furthermore, we provide evidence for the transcriptional downregulation of the gene encoding a SA-methyltransferase from the pathogen in OXR2-OE plants that could contribute to the phenotype.


2004 ◽  
Vol 94 (5) ◽  
pp. 515-519 ◽  
Author(s):  
Menglan Zhu ◽  
Ling Wang ◽  
Qinghua Pan

The Chinese native cv. Q14 expresses a high level of resistance to many isolates of Pyricularia grisea collected from Japan, Thailand, and China. Q14 was crossed to an indica-susceptible cultivar, Q61. To rapidly determine the chromosomal location of the major resistance gene present in the cultivar, a linkage analysis using microsatellite markers was performed in the F2 population segregating 3R:1S (resistant/susceptible) through bulked-segregant analysis (BSA) in combination with recessiveclass analysis (RCA). A total of 189 microsatellite markers selected from each chromosome equally (with ≈10 centimorgans) were tested with the BSA approach. Only two markers, RM151 and RM259, located on chromosome 1 showed positive and negative polymorphisms, respectively, for a resistance gene segregating in the population. To confirm the polymorphic markers, a total of 155 viable susceptible individuals were tested with the RCA approach. The markers RM151 and RM259 were found to link to the resistance gene with recombination frequencies of 11.9 ± 2.8% and 9.7 ± 8.0%, respectively. For further characterization of the resistance gene, 3 resistance genes mapped on chromosome 1, as well as 15 major resistance genes that might be employed in the breeding program, were selected for differential tests with 85 Chinese isolates. The resistance gene identified in this research conveys reactions distinct from those conditioned by the 18 resistance genes. This new resistance gene tentatively was designated Pi27(t).


2013 ◽  
Vol 49 (No. 3) ◽  
pp. 95-102 ◽  
Author(s):  
M. Soldánová ◽  
J. Ištvánek ◽  
J. Řepková ◽  
A. Dreiseitl

Two dominant genes for resistance to powdery mildew (caused by Blumeria graminis f.sp. hordei) from the PI296825 and PI466461 accessions of wild barley (Hordeum vulgare subsp. spontaneum) were identified close to the subtelomeric region of the short arm of chromosome 7H. Genetic analyses predicted two resistance loci in F<sub>2</sub> populations established from crosses between each of the two accessions and the winter barley (H. vulgare) variety Tiffany. Genetic mapping revealed a highly effective (52% of phenotypic variation) resistance gene from PI296825 located between the markers GBMS192 and GBM1060. In F<sub>2</sub> plants exhibiting resistance reaction types (RT) 0 to RT1&ndash;2, specific DNA fragments for co-segregating markers were amplified. In plants with RT2 and RT2&ndash;3, the resistance was conferred by another unidentified resistance gene. In PI466461, the resistance gene found on the short arm of chromosome 7H was flanked by the markers GBM1126 and GBM1060. Another resistance gene coincided with the Mla locus. Resistance in RT0 plants was conferred by both resistance genes, which accounted for 58% of the total phenotypic variation. The two resistance genes with the same location on chromosome 7H have different phenotypic effects on the resistance in RT0 plants; therefore, the resistance alleles could be at different loci.


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