BCT Boost Segmentation with U-net in TensorFlow

2019 ◽  
Vol 28 (1) ◽  
pp. 25-34
Author(s):  
Grzegorz Wieczorek ◽  
Izabella Antoniuk ◽  
Michał Kruk ◽  
Jarosław Kurek ◽  
Arkadiusz Orłowski ◽  
...  
Keyword(s):  
Breast Tissue ◽  
Data Augmentation ◽  
Radiation Treatment ◽  
Similarity Index ◽  
Structural Similarity ◽  
Breast Conserving Therapy ◽  
Target Volume ◽  
Medical Procedure ◽  
Data Set ◽  
Small Initial Data

In this paper we present a new segmentation method meant for boost area that remains after removing the tumour using BCT (breast conserving therapy). The selected area is a region on which radiation treatment will later be made. Consequently, an inaccurate designation of this region can result in a treatment missing its target or focusing on healthy breast tissue that otherwise could be spared. Needless to say that exact indication of boost area is an extremely important aspect of the entire medical procedure, where a better definition can lead to optimizing of the coverage of the target volume and, in result, can save normal breast tissue. Precise definition of this area has a potential to both improve the local control of the disease and to ensure better cosmetic outcome for the patient. In our approach we use U-net along with Keras and TensorFlow systems to tailor a precise solution for the indication of the boost area. During the training process we utilize a set of CT images, where each of them came with a contour assigned by an expert. We wanted to achieve a segmentation result as close to given contour as possible. With a rather small initial data set we used data augmentation techniques to increase the number of training examples, while the final outcomes were evaluated according to their similarity to the ones produced by experts, by calculating the mean square error and the structural similarity index (SSIM).

scholarly journals GPR B-Scan Image Denoising via Multi-Scale Convolutional Autoencoder with Data Augmentation

Electronics ◽  
2021 ◽  
Vol 10 (11) ◽  
pp. 1269
Author(s):  
Jiabin Luo ◽  
Wentai Lei ◽  
Feifei Hou ◽  
Chenghao Wang ◽  
Qiang Ren ◽  
...  
Keyword(s):  
Image Denoising ◽  
Data Augmentation ◽  
Noise Suppression ◽  
Random Noise ◽  
Similarity Index ◽  
Structural Similarity ◽  
Training Dataset ◽  
Generative Adversarial Network ◽  
Multi Scale ◽  
Convolutional Autoencoder

Ground-penetrating radar (GPR), as a non-invasive instrument, has been widely used in civil engineering. In GPR B-scan images, there may exist random noise due to the influence of the environment and equipment hardware, which complicates the interpretability of the useful information. Many methods have been proposed to eliminate or suppress the random noise. However, the existing methods have an unsatisfactory denoising effect when the image is severely contaminated by random noise. This paper proposes a multi-scale convolutional autoencoder (MCAE) to denoise GPR data. At the same time, to solve the problem of training dataset insufficiency, we designed the data augmentation strategy, Wasserstein generative adversarial network (WGAN), to increase the training dataset of MCAE. Experimental results conducted on both simulated, generated, and field datasets demonstrated that the proposed scheme has promising performance for image denoising. In terms of three indexes: the peak signal-to-noise ratio (PSNR), the time cost, and the structural similarity index (SSIM), the proposed scheme can achieve better performance of random noise suppression compared with the state-of-the-art competing methods (e.g., CAE, BM3D, WNNM).

scholarly journals Multi-Level Thresholding with Fractional-Order Darwinian PSO and Tsallis Function

2019 ◽  
Vol 8 (11) ◽  
pp. 1719-1734
Keyword(s):  
Fractional Order ◽  
Statistical Significance ◽  
Similarity Index ◽  
Optimal Solution ◽  
Image Data ◽  
Bat Algorithm ◽  
Structural Similarity ◽  
Standard Test ◽  
Data Set ◽  
Multi Level

A novel optimal multi-level thresholding is proposed using gray scale images for Fractional-order Darwinian Particle Swarm Optimization (FDPSO) and Tsallis function. The maximization of Tsallis entropy is chosen as the Objective Function (OF) which monitors FDPSO’s exploration until the search converges to an optimal solution. The proposed method is tested on six standard test images and compared with heuristic methods, such as Bat Algorithm (BA) and Firefly Algorithm (FA). The robustness of the proposed thresholding procedure was tested and validated on the considered image data set with Poisson Noise (PN) and Gaussian Noise (GN). The results obtained with this study verify that, FDPSO offers better image quality measures when compared with BA and FA algorithms. Wilcoxon’s test was performed by Mean Structural Similarity Index (MSSIM), and the results prove that image segmentation is clear even in noisy dataset based on the statistical significance of the FDPSO with respect to BA and FA.

scholarly journals Next frame prediction using ConvLSTM

2022 ◽  
Vol 2161 (1) ◽  
pp. 012024
Author(s):  
Padmashree Desai ◽  
C Sujatha ◽  
Saumyajit Chakraborty ◽  
Saurav Ansuman ◽  
Sanika Bhandari ◽  
...  
Keyword(s):  
Autonomous Vehicles ◽  
Short Term Memory ◽  
Similarity Index ◽  
Structural Similarity ◽  
Video Frame ◽  
Data Set ◽  
Intelligent Decision Making ◽  
Perceptual Distance ◽  
Future Events ◽  
The Difference

Abstract Intelligent decision-making systems require the potential for forecasting, foreseeing, and reasoning about future events. The issue of video frame prediction has aroused a lot of attention due to its usefulness in many computer vision applications such as autonomous vehicles and robots. Recent deep learning advances have significantly improved video prediction performance. Nevertheless, as top-performing systems attempt to foresee even more future frames, their predictions become increasingly foggy. We developed a method for predicting a future frame based on a series of prior frames that services the Convolutional Long-Short Term Memory (ConvLSTM) model. The input video is segmented into frames, fed to the ConvLSTM model to extract the features and forecast a future frame which can be beneficial in a variety of applications. We have used two metrics to measure the quality of the predicted frame: structural similarity index (SSIM) and perceptual distance, which help in understanding the difference between the actual frame and the predicted frame. The UCF101 data set is used for testing and training in the project. It is a data collection of realistic action videos taken from YouTube with 101 action categories for action detection. The ConvLSTM model is trained and tested for 24 categories from this dataset and a future frame is predicted which yields satisfactory results. We obtained SSIM as 0.95 and perceptual similarity as 24.28 for our system. The suggested work’s results are also compared to those of state-of-the-art approaches, which are shown to be superior.

A Deep Learning based Arabic Script Recognition System: Benchmark on KHAT

2020 ◽  
Vol 17 (3) ◽  
pp. 299-305 ◽  
Author(s):  
Riaz Ahmad ◽  
Saeeda Naz ◽  
Muhammad Afzal ◽  
Sheikh Rashid ◽  
Marcus Liwicki ◽  
...  
Keyword(s):  
Deep Learning ◽  
Character Recognition ◽  
Data Augmentation ◽  
Short Term Memory ◽  
Recognition System ◽  
Learning Approach ◽  
Arabic Text ◽  
Data Set ◽  
Processing Step ◽  
Handwritten Arabic

This paper presents a deep learning benchmark on a complex dataset known as KFUPM Handwritten Arabic TexT (KHATT). The KHATT data-set consists of complex patterns of handwritten Arabic text-lines. This paper contributes mainly in three aspects i.e., (1) pre-processing, (2) deep learning based approach, and (3) data-augmentation. The pre-processing step includes pruning of white extra spaces plus de-skewing the skewed text-lines. We deploy a deep learning approach based on Multi-Dimensional Long Short-Term Memory (MDLSTM) networks and Connectionist Temporal Classification (CTC). The MDLSTM has the advantage of scanning the Arabic text-lines in all directions (horizontal and vertical) to cover dots, diacritics, strokes and fine inflammation. The data-augmentation with a deep learning approach proves to achieve better and promising improvement in results by gaining 80.02% Character Recognition (CR) over 75.08% as baseline.

ANALISIS SENSITIVITAS VIDEO MPEG-4 BERDASARKAN STRUKTUR FRAME PADA TRANSMISI DVB-T

2020 ◽  
Vol 25 (2) ◽  
pp. 86-97
Author(s):  
Sandy Suryo Prayogo ◽  
Tubagus Maulana Kusuma
Keyword(s):  
Deep Learning ◽  
Bit Error Rate ◽  
Error Rate ◽  
Signal To Noise Ratio ◽  
Similarity Index ◽  
Structural Similarity ◽  
Signal To Noise ◽  
Structural Similarity Index ◽  
Noise Ratio

DVB merupakan standar transmisi televisi digital yang paling banyak digunakan saat ini. Unsur terpenting dari suatu proses transmisi adalah kualitas gambar dari video yang diterima setelah melalui proses transimisi tersebut. Banyak faktor yang dapat mempengaruhi kualitas dari suatu gambar, salah satunya adalah struktur frame dari video. Pada tulisan ini dilakukan pengujian sensitifitas video MPEG-4 berdasarkan struktur frame pada transmisi DVB-T. Pengujian dilakukan menggunakan simulasi matlab dan simulink. Digunakan juga ffmpeg untuk menyediakan format dan pengaturan video akan disimulasikan. Variabel yang diubah dari video adalah bitrate dan juga group-of-pictures (GOP), sedangkan variabel yang diubah dari transmisi DVB-T adalah signal-to-noise-ratio (SNR) pada kanal AWGN di antara pengirim (Tx) dan penerima (Rx). Hasil yang diperoleh dari percobaan berupa kualitas rata-rata gambar pada video yang diukur menggunakan metode pengukuran structural-similarity-index (SSIM). Dilakukan juga pengukuran terhadap jumlah bit-error-rate BER pada bitstream DVB-T. Percobaan yang dilakukan dapat menunjukkan seberapa besar sensitifitas bitrate dan GOP dari video pada transmisi DVB-T dengan kesimpulan semakin besar bitrate maka akan semakin buruk nilai kualitas gambarnya, dan semakin kecil nilai GOP maka akan semakin baik nilai kualitasnya. Penilitian diharapkan dapat dikembangkan menggunakan deep learning untuk memperoleh frame struktur yang tepat di kondisi-kondisi tertentu dalam proses transmisi televisi digital.

scholarly journals Building Damage Detection from Post-Event Aerial Imagery Using Single Shot Multibox Detector

2019 ◽  
Vol 9 (6) ◽  
pp. 1128 ◽  
Author(s):  
Yundong Li ◽  
Wei Hu ◽  
Han Dong ◽  
Xueyan Zhang
Keyword(s):  
Machine Learning ◽  
Data Augmentation ◽  
Hurricane Sandy ◽  
Training Data ◽  
Aerial Images ◽  
Detection Methods ◽  
Single Shot ◽  
Data Set ◽  
Augmentation Strategies ◽  
Post Disaster

Using aerial cameras, satellite remote sensing or unmanned aerial vehicles (UAV) equipped with cameras can facilitate search and rescue tasks after disasters. The traditional manual interpretation of huge aerial images is inefficient and could be replaced by machine learning-based methods combined with image processing techniques. Given the development of machine learning, researchers find that convolutional neural networks can effectively extract features from images. Some target detection methods based on deep learning, such as the single-shot multibox detector (SSD) algorithm, can achieve better results than traditional methods. However, the impressive performance of machine learning-based methods results from the numerous labeled samples. Given the complexity of post-disaster scenarios, obtaining many samples in the aftermath of disasters is difficult. To address this issue, a damaged building assessment method using SSD with pretraining and data augmentation is proposed in the current study and highlights the following aspects. (1) Objects can be detected and classified into undamaged buildings, damaged buildings, and ruins. (2) A convolution auto-encoder (CAE) that consists of VGG16 is constructed and trained using unlabeled post-disaster images. As a transfer learning strategy, the weights of the SSD model are initialized using the weights of the CAE counterpart. (3) Data augmentation strategies, such as image mirroring, rotation, Gaussian blur, and Gaussian noise processing, are utilized to augment the training data set. As a case study, aerial images of Hurricane Sandy in 2012 were maximized to validate the proposed method’s effectiveness. Experiments show that the pretraining strategy can improve of 10% in terms of overall accuracy compared with the SSD trained from scratch. These experiments also demonstrate that using data augmentation strategies can improve mAP and mF1 by 72% and 20%, respectively. Finally, the experiment is further verified by another dataset of Hurricane Irma, and it is concluded that the paper method is feasible.

scholarly journals An efficient technique for CT scan images classification of COVID-19

2020 ◽  
pp. 1-14
Author(s):  
Esraa Hassan ◽  
Noha A. Hikal ◽  
Samir Elmuogy
Keyword(s):  
Neural Network ◽  
Diagnostic Tool ◽  
Deep Neural Network ◽  
Data Augmentation ◽  
Performance Metrics ◽  
Classification Model ◽  
Data Set ◽  
Training Models ◽  
The Earth ◽  
Diagnostic Time

Nowadays, Coronavirus (COVID-19) considered one of the most critical pandemics in the earth. This is due its ability to spread rapidly between humans as well as animals. COVID_19 expected to outbreak around the world, around 70 % of the earth population might infected with COVID-19 in the incoming years. Therefore, an accurate and efficient diagnostic tool is highly required, which the main objective of our study. Manual classification was mainly used to detect different diseases, but it took too much time in addition to the probability of human errors. Automatic image classification reduces doctors diagnostic time, which could save human’s life. We propose an automatic classification architecture based on deep neural network called Worried Deep Neural Network (WDNN) model with transfer learning. Comparative analysis reveals that the proposed WDNN model outperforms by using three pre-training models: InceptionV3, ResNet50, and VGG19 in terms of various performance metrics. Due to the shortage of COVID-19 data set, data augmentation was used to increase the number of images in the positive class, then normalization used to make all images have the same size. Experimentation is done on COVID-19 dataset collected from different cases with total 2623 where (1573 training,524 validation,524 test). Our proposed model achieved 99,046, 98,684, 99,119, 98,90 In terms of Accuracy, precision, Recall, F-score, respectively. The results are compared with both the traditional machine learning methods and those using Convolutional Neural Networks (CNNs). The results demonstrate the ability of our classification model to use as an alternative of the current diagnostic tool.

scholarly journals Advanced Imaging Techniques for Radiotherapy Planning of Gliomas

Cancers ◽  
2021 ◽  
Vol 13 (5) ◽  
pp. 1063
Author(s):  
Antonella Castellano ◽  
Michele Bailo ◽  
Francesco Cicone ◽  
Luciano Carideo ◽  
Natale Quartuccio ◽  
...  
Keyword(s):  
Radiation Treatment ◽  
Imaging Modality ◽  
Imaging Techniques ◽  
Clinical Results ◽  
Target Volume ◽  
Radiotherapy Planning ◽  
Tumor Control ◽  
Current Standard ◽  
Volume Delineation ◽  
Hemodynamic Information

The accuracy of target delineation in radiation treatment (RT) planning of cerebral gliomas is crucial to achieve high tumor control, while minimizing treatment-related toxicity. Conventional magnetic resonance imaging (MRI), including contrast-enhanced T1-weighted and fluid-attenuated inversion recovery (FLAIR) sequences, represents the current standard imaging modality for target volume delineation of gliomas. However, conventional sequences have limited capability to discriminate treatment-related changes from viable tumors, owing to the low specificity of increased blood-brain barrier permeability and peritumoral edema. Advanced physiology-based MRI techniques, such as MR spectroscopy, diffusion MRI and perfusion MRI, have been developed for the biological characterization of gliomas and may circumvent these limitations, providing additional metabolic, structural, and hemodynamic information for treatment planning and monitoring. Radionuclide imaging techniques, such as positron emission tomography (PET) with amino acid radiopharmaceuticals, are also increasingly used in the workup of primary brain tumors, and their integration in RT planning is being evaluated in specialized centers. This review focuses on the basic principles and clinical results of advanced MRI and PET imaging techniques that have promise as a complement to RT planning of gliomas.

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