scholarly journals Bakanae Disease of Rice in Malaysia and Indonesia: Etiology of the Causal Agent Based on Morphological, Physiological and Pathogenicity Characteristics

2008 ◽  
Vol 48 (4) ◽  
pp. 475-485 ◽  
Author(s):  
Nur Izzati Mohd Zainudin ◽  
Azmi Razak ◽  
Baharuddin Salleh

Bakanae Disease of Rice in Malaysia and Indonesia: Etiology of the Causal Agent Based on Morphological, Physiological and Pathogenicity CharacteristicsBakanae disease on rice has been recorded almost in all countries where paddy is grown commercially, especially in Asian countries, including Malaysia and Indonesia. Bakanae disease was widespread in Peninsular Malaysia and three provinces of Indonesia with the range of disease severity from scale 1 to 5 and disease incidence from 0.5 to 12.5% during 2004-2005 main growing seasons. A total of fiveFusariumspecies belonging to section Liseola and their allied i.e.Fusarium fujikuroi, F. proliferatum, F. sacchari, F. subglutinans and F. verticillioideswere isolated and identified on the basis of their morphological characteristics. Literature data showed that the bakanae disease of rice all over the world is caused byF. fujikuroiand probably some otherFusariumspecies from section Liseola or allied. However, from pathogenicity tests that have been carried out by using variety MR 211 of rice it was evident thatF. fujikuroiwas highly virulent and the only species involved in causing bakanae disease. Therefore, this species was the only one detected to be able to produce gibberellic acid - (GA3) with Rfvalue 0.40 and 0.62, developed in solvent systems isopropanol:ammonia:water (10: 1: 1), v/v/ v and chloroform:ethyl acetate:formic acid (5: 4: 1), v/v/v, respectively. This knowledge would be invaluable in developing our understanding on the interaction betweenF. fujikuroiand the host plants.

Plant Disease ◽  
2020 ◽  
Vol 104 (7) ◽  
pp. 1900-1907
Author(s):  
Longhai Xue ◽  
Yong Liu ◽  
Su Zhou ◽  
James F. White ◽  
Chunjie Li

Drechslera leaf spot (DLS) caused by Pyrenophora (Drechslera) species is one of the most serious diseases affecting Italian ryegrass (Lolium multiflorum) in China. Between 2015 and 2018, this disease was observed in three Italian ryegrass fields in the province of Sichuan, China. Average leaf disease incidence was approximately 1 to 12% but could range up to 100%. Symptoms appeared as brown or tan spots surrounded by a yellow halo, or brown to dark brown net blotch; subsequently, spots increased in number and size, and they later covered a large area of leaf, eventually causing leaf death. In this study, 86 strains of Pyrenophora fungi were isolated from leaf lesions of Italian ryegrass. Coupled with phylogenetic analysis of the internal transcribed spacer region, partial 28S ribosomal RNA gene, and glyceraldehyde-3-phosphate dehydrogenase gene, morphological characteristics showed that Pyrenophora dictyoides and P. nobleae are associated with Italian ryegrass in southwest China. Pathogenicity tests confirmed that both species can infect Italian ryegrass, causing leaf spot, whereas the virulence of the two species differed; P. nobleae showed lower pathogenicity to Italian ryegrass. This is the first time that these two Pyrenophora species were formally reported on Italian ryegrass based on both morphological and molecular characters. Overall, this study improves knowledge of the Pyrenophora species associated with Italian ryegrass and provides a foundation for control of this disease in the future.


2020 ◽  
Author(s):  
Sais-Beul Lee ◽  
Namgyu Kim ◽  
Sumin Jo ◽  
Yeon-Jae Hur ◽  
Ji-youn Lee ◽  
...  

AbstractBakanae disease is a fungal disease of rice (Oryza sativa L.) caused by the pathogen Gibberella fujikuroi (also known as Fusarium fujikuroi). Recently the disease incidence has increased in several Asian countries and continues to spread throughout the world. No rice varieties have been developed yet to be completely resistant to this disease. With increasing need to identify various genetic resources to impart resistance to local elite varieties, this study was carried out to identify novel quantitative trait loci (QTLs) from an indica variety Zenith. We performed a QTL mapping using 180 F2:9 recombinant inbred lines (RILs) derived from a cross between the resistant variety, Zenith, and the susceptible variety, Ilpum. A primary QTL study using the genotypes and phenotypes of the RILs indicated that the locus qBK1z conferring bakanae disease resistance from the Zenith was located in a 2.8 Mb region bordered by the two SSR markers, RM1331 and RM3530 on chromosome 1.The log of odds (LOD) score of qBK1z was 13.43, accounting for 30.9% of the total phenotypic variation. A finer localization of qBK1z was delimited at an approximate 730 kb interval in the physical map between Chr01_1435908 (1.43 Mbp) and RM10116 (2.16 Mbp). The development of a rice variety with a higher level of resistance against bakanae disease is a major challenge in many rice growing countries. Introducing qBK1z or pyramiding with other previously identified QTLs could provide effective genetic control of bakanae disease in rice.


Plant Disease ◽  
2011 ◽  
Vol 95 (9) ◽  
pp. 1194-1194 ◽  
Author(s):  
G. Polizzi ◽  
D. Aiello ◽  
V. Guarnaccia ◽  
A. Panebianco ◽  
P. T. Formica

The genus Passiflora (Passifloraceae family) contains more than 500 species and several hybrids. In Italy, some of these species and hybrids are grown as ornamental evergreen vines or shrubs. During August and September 2010, a crown and root rot was observed in a stock of approximately 6,000 potted 2-year-old plants of Passiflora mollissima (Kunth) Bailey, commonly known as the banana passionflower, in a nursery located in eastern Sicily (southern Italy). Disease incidence was approximately 20%. Disease symptoms consisted of water-soaked lesions at the crown and a root rot. Successively, older crown lesions turned light brown to brown and expanded to girdle the stem. As crown and root rot progressed, basal leaves turned yellow and gradually became necrotic and infected plants wilted and died. A fungus with mycelial and morphological characteristics of Rhizoctonia solani Kühn was consistently isolated from crown lesions and brown decaying roots when plated on potato dextrose agar (PDA) amended with streptomycin sulfate at 100 μg/ml. Fungal colonies were initially white, turned brown with age, and produced irregularly shaped, brown sclerotia. Mycelium was branched at right angles with a septum near the branch with a slight constriction at the branch base. Hyphal cells removed from 10 representative cultures grown at 25°C on 2% water agar were determined to be multinucleate when stained with 1% safranin O and 3% KOH solution (1) and examined at ×400. Anastomosis groups were determined by pairing isolates on 2% water agar in petri plates (4). Pairings were made with tester strains of AG-1, AG-2, AG-3, AG-4, AG-5, AG-6, and AG-11. Anastomosis was observed only with tester isolates of AG-4 (3). Pathogenicity tests were performed on container-grown, healthy, 3-month-old cuttings. Twenty plants of P. mollissima were inoculated near the base of the stem with five 1-cm2 PDA plugs from 5-day-old mycelial plugs obtained from two representative cultures. The same number of plants served as uninoculated controls. Plants were maintained at 25°C and 95% relative humidity with a 12-h fluorescent light/dark regimen. Wilt symptoms due to crown and root rot, identical to ones observed in the nursery, appeared 7 to 8 days after inoculation with either of the two isolates and all plants died within 20 days. No disease was observed on control plants. R. solani AG-4 was reisolated from symptomatic tissues and identified as previously described, confirming its pathogenicity. Damping-off or crown and root rot due to R. solani were previously detected on P. edulis in Brazil, Africa, India, Oceania, and Australia (2). To our knowledge, this is the first report of R. solani causing crown and root rot on P. mollissima. References: (1) R. J. Bandoni. Mycologia 71:873, 1979. (2) J. L. Bezerra and M. L. Oliveira. Fitopathol. Brasil. 9:273, 1984. (3) D. E. Carling. Page 37 in: Grouping in Rhizoctonia solani by Hyphal Anastomosis Reactions. Kluwer Academic Publishers, the Netherlands, 1996. (4) C. C. Tu and J. W. Kimbrough. Mycologia 65:941, 1973.


Author(s):  
Arely Anayansi Vargas-Díaz ◽  
Jairo Cristóbal-Alejo ◽  
Blondy Canto-Canché ◽  
María Marcela Gamboa-Angulo

The chrysanthemum is the second most important cut flower in the world, however, its quality and commercial value is affected by the leaf blight produced by <em>Alternaria </em>spp. The objective of this work was to evaluate the causal agent of leaf blight in Chrysanthemum, and its control with aqueous extracts of <em>Acalypha gaumeri </em>and <em>Bonellia flammea</em>. The fungus was collected and identified from leaves and stems of chrysanthemum plants. Subsequently, molecular identification and pathogenicity tests were performed on chrysanthemum plants. In the field, treatments were evaluated with weekly applications of: T1: <em>B. flammea </em>bark extract, T2: <em>A. gaumeri </em>root extract, T3: negative control (water) and T4: Captan® fungicide. Prior to the application of the treatments, plants were inoculated with the isolated fungus (2.5 × 106 spores mL-1) and severity was evaluated. <em>Alternaria chrysanthemi </em>was identified as the causal agent. Based on the severity percentage, the lowest averages of the area under the disease progress curve, the lowest rates of apparent infection, the lowest intensity of the disease and the greater effectiveness in controlling the disease were observed for T2 (165, 0.017, 8 and 67%, respectively) followed by T1 (186, 0.022, 13 y 50 %, respectively) and T4 (179, 0.023, 14 y 45%, respectively), observing a significantly different than negative control T3 (369, 0.025, 25 and 0%, respectively). Plant extracts have potential to be used as an alternative in the management of <em>Alternaria </em>leaf blight in chrysanthemum.


Plant Disease ◽  
2010 ◽  
Vol 94 (1) ◽  
pp. 128-128 ◽  
Author(s):  
L. Keith ◽  
L. Sugiyama ◽  
M. Nagao

Macadamia quick decline (MQD) has been a persistent problem since 1986 when it started killing productive 14- to 36-year-old macadamia trees in the Hilo, HI area. Fungi including Nectria regulosa, Xylaria arbuscula, Phellinus gilvus, and Acremonium recifei have been attributed to MQD and could kill twigs on healthy macadamia trees after artificial inoculation (3). The oomycete originally called Phytophthora capsici and later reclassified as P. tropicalis was also considered to be involved in the MQD complex (3). However, the primary causal agent has never been determined and the issue continues to perplex the industry. Between 2005 and 2006, a mature macadamia field on the Waiakea Experiment Station planted with cv. HAES 333 began to experience a high frequency of MQD. Trees exhibiting dull green, yellow, or brown leaves within the tree canopy were observed. Sap bleeding from the trunk, Ambrosia beetles, and Nectria fruiting bodies were consistently associated with MQD. Disease incidence was 22%. Of 21 infected trees, 53% died within an average period of 6.8 months. Four branch samples were collected from four trees showing browning of leaves, sap bleeding, Ambrosia beetles, and Nectria, and seven P. tropicalis isolates were recovered from diseased tissue on water agar or V8 agar media. No other microorganisms were isolated from diseased branches. On the basis of the morphological characteristics described by Aragaki and Uchida (1), the isolates were identified as P. tropicalis. The morphological identification was confirmed by molecular analysis of the 5.8S subunit and flanking internal transcribed spacers (ITS1 and ITS2) of rDNA amplified from DNA extracted from single-zoospore cultures with the ITS1/ITS4 primers (2,4) and sequenced (GenBank No. FJ849839). Pathogenicity tests were conducted on four 12-year-old macadamia trees in the field. A 4 × 104 zoospore/ml suspension of P. tropicalis isolate L1 was injected into branches of cv. HAES 344 to incite MQD signs and symptoms. Branches inoculated with P. tropicalis started showing the initial sign of MQD, excessive sap bleeding, within 36 days postinoculation (dpi). The presence of Ambrosia beetle frass and the appearance of orange fruiting bodies of Nectria were visible within 110 dpi. No symptoms were noted on the four control tree branches inoculated by the same method but with sterilized distilled water. P. tropicalis was reisolated from the symptomatic macadamia branches, fulfilling Koch's postulates. To our knowledge, this is the first report of P. tropicalis as the primary causal agent of MQD and its association with sap bleeding, Ambrosia beetles, and a saprotrophic species of Nectria. After completion of our research, Ko (3) reported that the MQD P. capsici was P. tropicalis, supporting our finding in this study. Quick decline of macadamia trees continues to be a serious problem in Hawaii. Minimizing tree loss in mature orchards is critical for maintaining the economic viability of Hawaii's macadamia industry. Understanding the biology of this pathosystem will enable the development of control and prevention strategies. References: (1) M. Aragaki and J. Y. Uchida. Mycologia 93:137, 2001. (2) G. Caetano-Annolles et al. Curr. Genet. 39:346, 2001. (3) W.-H. Ko. Bot. Stud. 50:1, 2009. (4) T. J. White et al. PCR Protocols: A Guide to Methods and Applications. Academic Press, San Diego, CA, 1990.


Pathogens ◽  
2019 ◽  
Vol 8 (4) ◽  
pp. 245 ◽  
Author(s):  
Naeem ◽  
Li ◽  
Yan ◽  
Raza ◽  
Gong ◽  
...  

Intercropping has been considered as a kind of a sustainable agricultural cropping system. In southwest China, maize/soybean strip intercropping has commonly been practised under local limited agricultural land resources. However, heavy rainfall in combination with high humidity and low temperatures cause severe pod and seed deterioration in the maturity and pre-harvesting stages of intercropped soybean. Numerous Fusarium species have been reported as the dominant pathogens of soybean root rot, seedling blight, as well as pod field mold in this area. However, the diversity and pathogenicity of Fusarium species on soybean pods remain unclear. In the current study, diseased soybean pods were collected during the cropping season of 2018 from five different intercropped soybean producing areas. A total of 83 Fusarium isolates were isolated and identified as F. fujikuroi, F. graminearum, F. proliferatum, and F. incarnatum-equiseti species complex based on morphological characteristics and phylogenetic analysis of the nucleotide sequence of EF1-α and RPB2 genes. Pathogenicity tests demonstrated that all Fusarium species were pathogenic to seeds of the intercropped soybean cultivar Nandou12. Fusarium fujikuroi had the maximum disease severity, with a significant reduction of seed germination rate, root length, and seed weight, followed by F. equiseti, F. graminearum, F. proliferatum, and F. incarnatum. Additionally, the diversity of Fusarium species on soybean pods was also considerably distinct according to the geographical origin and soybean varieties. Thus, the findings of the current study will be helpful for the management and resistance breeding of soybean pod decay in the maize/soybean intercropping system.


2020 ◽  
Author(s):  
Sais-Beul Lee ◽  
Namgyu Kim ◽  
Sumin Jo ◽  
Yeon-Jae Hur ◽  
Ji-youn Lee ◽  
...  

Abstract Background: Bakanae disease is a fungal disease of rice (Oryza sativa L.) caused by the pathogen Gibberella fujikuroi (also known as Fusarium fujikuroi). Recently the disease incidence has increased in several Asian countries and continues to spread throughout the world. No rice varieties have been developed yet to be completely resistant to this disease. With increasing need to identify various genetic resources to impart resistance to local elite varieties, this study was carried out to identify novel quantitative trait loci (QTLs) from an indica variety Zenith. Results: We performed a QTL mapping using 180 F2:9 recombinant inbred lines (RILs) derived from a cross between the resistant variety, Zenith, and the susceptible variety, Ilpum. A primary QTL study using the genotypes and phenotypes of the RILs indicated that the locus qBK1z conferring bakanae disease resistance from the Zenith was located in a 2.8 Mb region bordered by the two SSR markers, RM1331 and RM3530 on chromosome 1. The log of odds (LOD) score of qBK1z was 13.43, accounting for 30.9% of the total phenotypic variation. A finer localization of qBK1z was delimited at an approximate 730 kb interval in the physical map between Chr01_1435908 (1.43 Mbp) and RM10116 (2.16 Mbp).Conclusion: The development of a rice variety with a higher level of resistance against bakanae disease is a major challenge in many rice growing countries. Introducing qBK1z or pyramiding with other previously identified QTLs could provide effective genetic control of bakanae disease in rice.


Author(s):  
Safaa Neamat Hussein

This study aimed to isolate the causal agent of the root rot disease of cucumber and control it biologically. Samples were collected in the cucumber fields in the Diyala and Saladin governorates of Iraq. Isolation test demonstrated associate fungi belong to the twelve geniuses. Fusarium solani exhibited highly percentage of appearance of 82.15% with frequency 54.00%. Seventy-seven isolates identified as F. solani according to their cultural and morphological characteristics while sixty-five isolates of them amplified successfully with specific primer of Fusarium spp using PCR technique. Isolate DF13 was most virulent isolated while exhibited 0% cucumber seed germination in vitro. The bio-agent Bacillus pumilus demonstrated significant inhibition ability against the fungal isolate DF13 in vitro of 100%. Under greenhouse condition B. pumilus decreased the disease incidence and severity to 30.55% and 20.75% respectively compared to the negative control which was 80.50%, 55.00% respectively.


Plant Disease ◽  
2015 ◽  
Vol 99 (2) ◽  
pp. 288-288 ◽  
Author(s):  
X.-M. Liu ◽  
Y.-X. Wei ◽  
H. Zhang ◽  
F.-X. Zhou ◽  
J.-J. Pu

Croton (Codiaeum variegatum (Linn.) var. pictum (Lodd.)) is an ornamental plant commonly grown in southern China. In March 2014, severe powdery mildew infections were observed on crotons in gardens of Hainan University (20.1°N and 110.3°E), Haikou, Hainan province. Disease incidence was estimated in a random batch of 100 plants in three replicates, with the average value approaching 80%. Symptoms first appeared as white circular patches on the adaxial surface and expanded to the abaxial surface, petioles, and stems. The top leaves were the most affected. Upper surfaces of the infected leaves were covered by white, dense mycelia. As the disease progressed, infected leaves turned purple on the lower surfaces and curly before becoming necrotic and abscising from the plant. Powdery mildew was more severe in shaded environments, especially during rainy or foggy weather in early spring. Two hundred conidiophores and conidia were observed microscopically. The conidiophores were straight or occasionally flexuous, 62.3 to 127.6 × 6.2 to 10.2 μm, consisting of two to three straight cells. Conidia were born in solitary on the top of conidiophores. Conidia were hyaline, ellipsoidal, 26.4 to 42.2 × 11.7 to 23.4 μm (average 32.5 × 16.5 μm), contained no distinct fibrosin bodies, and produced a subterminal germ tube. The wrinkling pattern of the outer walls of older conidia was angular or reticulated. Appressoria were single and multilobed. Cleistothecia were not observed. Based on morphological characteristics, the fungus was identified as Oidium neolycopersici (2), which was recently renamed Pseudoidium neolycopersici (L. Kiss) (3). The identity was confirmed by sequence analysis. Genomic DNA was extracted from the foliar powdery mildew colonies using Chelex-100 (Bio-Rad, Shanghai, China). The rDNA internal transcribed spacer (ITS) region was amplified with primers ITS1 and ITS4 (5). The ITS sequence of the representative isolates C01 (GenBank Accession No. KJ890378.1) and four other powdery mildew samples collected from crotons in Hainan University was 100% identical to that of P. neolycopersici isolates from tomato plants such as JQ972700 and AB163927. Inoculations were made by gently pressing diseased leaves onto leaves of five healthy plants of croton and tomato (‘Money maker’). Five non-inoculated croton and tomato plants served as controls. Inoculated and non-inoculated plants were maintained in an incubator at 25°C with a 12-h photoperiod. After eight days, typical powdery mildew symptoms developed on 93% of the inoculated plants, while no symptom developed on the non-inoculated plants. The pathogenicity tests were repeated three times. The same fungus was always re-isolated from the diseased tissue according to Koch's postulates. The pathogenicity tests further confirmed that the pathogen from crotons is P. neolycopersici (Basionym. Oidium neolycopersici (KJ890378.1)), which is commonly known as the tomato powdery mildew. P. neolycopersici is also a pathogen of Normania triphylla (1) and papaya (4). To our knowledge, this is the first report of P. neolycopersici infecting croton. The avenue of this pathogen entering gardens of Hainan University remains unknown. The gardens are located far away from tomato farms. Also no symptom of powdery mildew on croton was observed during surveys in other locations in Haikou. The origin of the pathogen warrants additional research. References: (1) D. Delmail et al. Mycotaxon 113:269, 2010. (2) L. Kiss et al. Mycol. Res. 105:684, 2001. (3) L. Kiss et al. Mycol. Res. 115:612, 2011. (4) J. G. Tsay et al. Plant Dis. 95:1188, 2011. (5) T. J. White et al. Page 315 in: PCR Protocols: A Guide to Methods and Applications. Academic Press, San Diego, CA, 1990.


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