scholarly journals Vegetation History in a Peat Succession Over the Past 8,000 years in the ISM-Controlled Kedarnath Region, Garhwal Himalaya: Reconstruction Using Molecular Fossils

2021 ◽  
Vol 9 ◽  
Author(s):  
Sharmila Bhattacharya ◽  
Harsh Kishor ◽  
Yadav Ankit ◽  
Praveen K. Mishra ◽  
Pradeep Srivastava
Keyword(s):  
Organic Matter ◽  
Vegetation History ◽  
Indian Subcontinent ◽  
Regional Scale ◽  
Garhwal Himalaya ◽  
Gas Chromatography Mass Spectrometry ◽  
Average Chain Length ◽  
Climate History ◽  
Proxy Records ◽  
Natural Climate

The Holocene epoch has witnessed several natural climate variations and these are well encoded in various geological archives. The present biomarker investigation in conjunction with previously published multi-proxy records was applied to reconstruct organic matter (OM) sources forming the peat succession spanning the last 8000 cal yr BP and shift in hydrological conditions from the Kedarnath region, Garhwal Himalaya. Intensified monsoon prevailed from ∼7515 until ∼2300 cal yr BP but with reversal to transient arid period particularly between ∼5200 and ∼3600 cal yr BP as revealed by the variability in n-C23/n-C31, ACL (average chain length of n-alkanes) and Paq (P-aqueous) values. A prolonged arid phase is recognizable during the interval between ∼2200 and ∼370 cal yr BP suggested by the n-alkane proxies. Regional scale heterogeneity in the monsoonal pattern is known in the studied temporal range of mid to late Holocene across the Indian subcontinent that is probably a result of complex climate dynamics, sensitivity of proxies and impact of teleconnections. The biomarker signatures deduced from gas chromatography mass spectrometry (GCMS) analysis are suggestive of a mixed biotic input that includes prokaryotes, Sphagnum spp. and gymnosperm flora. The mid chain alkanes viz. n-C23 and n-C25 denote the presence of typical peat forming Sphagnum moss that preferentially grows in humid and waterlogged conditions. Diterpane marker such as ent-kaurane indicates contribution of gymnosperms, whereas the hopanes are signatures of microbial input. The preservation of organic matter is attributed to little microbial degradation in a largely suboxic depositional environment. Our study strengthens the applicability of organic geochemical proxies for the reconstruction of past climate history and indicates their suitability for use on longer timescales given the high preservation potential of the molecular remains.

Application of a fractionation technique for better understanding of the removal of natural organic matter by alum coagulation

2002 ◽  
Vol 2 (5-6) ◽  
pp. 427-433 ◽  
Author(s):  
J. van Leeuwen ◽  
C. Chow ◽  
R. Fabris ◽  
N. Withers ◽  
D. Page ◽  
...  
Keyword(s):  
Organic Matter ◽  
Natural Organic Matter ◽  
High Performance ◽  
Relative Proportion ◽  
Water Source ◽  
Size Exclusion ◽  
Gas Chromatography Mass Spectrometry ◽  
Pyrolysis Gas ◽  
Alum Treatment ◽  
Hydrophobic Acids

To gain an improved understanding of the types of organic compounds that are recalcitrant to water treatment, natural organic matter (NOM) isolates from two drinking water sources (Mt. Zero and Moorabool reservoirs, Victoria, Australia) were separated into fractions of distinct chemical behaviour using resins. Four fractions were obtained from each water source and were organics absorbed to: (1) XAD-8 (very hydrophobic acids, VHA); (2) DAX-4 (slightly hydrophobic acids, SHA); (3) bound to an anion exchange resin (charged organics, CHAR); and (4) not absorbed or bound to resins (neutrals, NEUT). These fractions were then tested to determine the capacity of alum to remove them from water and to correlate this with the character of each isolate. The fractions were characterised by the application of high performance size exclusion chromatography (HPSEC), bacterial regrowth potential (BRP), trihalomethane formation potential (THMFP), pyrolysis gas-chromatography mass spectrometry (Py-GC-MS) and thermochemolysis. The highest removals of dissolved organic carbon (DOC) by alum treatment were in waters spiked with the CHAR fractions while the NEUT fractions were the most recalcitrant. The number average molecular weights (Mn) of DOC of the CHAR fractions before treatment were the highest, whilst those of the NEUT fractions were the lowest. After alum treatment, the Mn of the NEUT fractions were only slightly reduced. Results from Py-GC-MS and thermochemolysis indicate that the NEUT fractions had the highest relative proportion of saccharide derived organic material. Nonetheless, the BRP of waters spiked with the NEUT fractions differed markedly, indicating that organics recalcitrant to alum treatment can vary substantially in their chemical composition and capacity to support microbial growth.

scholarly journals Analyses of depositional environments of the Marcellus formation in New York using biomarker and trace metal proxies

2021 ◽  
Author(s):  
Reilly M. Blocho ◽  
Richard W. Smith ◽  
Mark R. Noll
Keyword(s):  
Fatty Acids ◽  
New York ◽  
Organic Matter ◽  
New York State ◽  
Depositional Environments ◽  
Average Chain Length ◽  
Lipid Biomarker ◽  
Two Samples ◽  
Biomarker Analysis ◽  
Marcellus Formation

AbstractThe purpose of this study was to observe how the composition of organic matter (OM) and the extent of anoxia during deposition within the Marcellus Formation in New York varied by distance from the sediment source in eastern New York. Lipid biomarkers (n-alkanes and fatty acids) in the extractable organic component (bitumen) of the shale samples were analyzed, and proxies such as the average chain length (ACL), aquatic to terrestrial ratio (ATR) and carbon preference index (CPI) of n-alkanes were calculated. Fatty acids were relatively non-abundant due to the age of the shale bed, but n-alkane distributions revealed that the primary component of the OM was terrigenous plants. The presence of shorter n-alkane chain lengths in the samples indicated that there was also a minor component of phytoplankton and algal (marine) sourced OM. Whole rock analyses were also conducted, and cerium anomalies were calculated as a proxy for anoxia. All samples had a negative anomaly value, indicating anoxic conditions during deposition. Two samples, however, contained values close to zero and thus were determined to have suboxic conditions. Anoxia and total organic matter (TOM) did not show any spatial trends across the basin, which may be caused by varying depths within the basin during deposition. A correlation between nickel concentrations and TOM was observed and indicates that algae was the primary source of the marine OM, which supports the lipid biomarker analysis. It was determined that the kerogen type of the Marcellus Formation in New York State is type III, consistent with a methane-forming shale bed.

Vegetation and climate history of Quebec’s mixed boreal forest suggests greater abundance of temperate species during the early- and mid-Holocene

Botany ◽  
2018 ◽  
Vol 96 (7) ◽  
pp. 437-448 ◽  
Author(s):  
Émilie Larochelle ◽  
Martin Lavoie ◽  
Pierre Grondin ◽  
Pierre-Luc Couillard
Keyword(s):  
Boreal Forests ◽  
Regional Scale ◽  
Plant Macrofossils ◽  
Habitat Characteristics ◽  
Temperate Species ◽  
White Pine ◽  
Yellow Birch ◽  
Climate History ◽  
History Of ◽  
Suitable Habitats

Today, scattered disjunct stands of two temperate species, yellow birch and white pine, are present north of their continuous distributional range in southern Quebec (Canada) at topographical locations that offer protection from severe fires. This study tested whether these species had populations more numerous and widespread millennia ago when the climate was presumably warmer. Specifically, this research involved the analyses of pollen, plant macrofossils, and charcoal fragments of two sites within the western part of Quebec’s balsam fir – paper birch bioclimatic domain: a forest humus deposit from a yellow birch stand (local scale), and a peatland (regional scale). Fossil data suggest that white pine was more abundant regionally between 7500 and 5000 cal. BP, before coming rare under subsequent cooler conditions. Likewise, yellow birch was more abundant regionally between 7700 and 1500 cal BP. Its subsequent decline and the local disappearance of white pine by ∼200 cal. BP may both be explained by the severe fires that occurred in recent centuries, as well as the rarity of suitable habitats for these species. The sustained presence of temperate species in mixed boreal forests is the result of the combined action of climate, natural disturbances and habitat characteristics.

scholarly journals Respiration of 13C-Labeled Substrates Added to Soil in the Field and Subsequent 16S rRNA Gene Analysis of 13C-Labeled Soil DNA

2003 ◽  
Vol 69 (3) ◽  
pp. 1614-1622 ◽  
Author(s):  
P. Padmanabhan ◽  
S. Padmanabhan ◽  
C. DeRito ◽  
A. Gray ◽  
D. Gannon ◽  
...  
Keyword(s):  
Organic Matter ◽  
Soil Organic Matter ◽  
16S Rrna ◽  
16S Rrna Genes ◽  
Rrna Genes ◽  
Gas Chromatography Mass Spectrometry ◽  
Rrna Gene ◽  
Labeled Compounds ◽  
Field Soil ◽  
Soil Dna

ABSTRACT Our goal was to develop a field soil biodegradation assay using 13C-labeled compounds and identify the active microorganisms by analyzing 16S rRNA genes in soil-derived 13C-labeled DNA. Our biodegradation approach sought to minimize microbiological artifacts caused by physical and/or nutritional disturbance of soil associated with sampling and laboratory incubation. The new field-based assay involved the release of 13C-labeled compounds (glucose, phenol, caffeine, and naphthalene) to soil plots, installation of open-bottom glass chambers that covered the soil, and analysis of samples of headspace gases for 13CO2 respiration by gas chromatography/mass spectrometry (GC/MS). We verified that the GC/MS procedure was capable of assessing respiration of the four substrates added (50 ppm) to 5 g of soil in sealed laboratory incubations. Next, we determined background levels of 13CO2 emitted from naturally occurring soil organic matter to chambers inserted into our field soil test plots. We found that the conservative tracer, SF6, that was injected into the headspace rapidly diffused out of the soil chamber and thus would be of little value for computing the efficiency of retaining respired 13CO2. Field respiration assays using all four compounds were completed. Background respiration from soil organic matter interfered with the documentation of in situ respiration of the slowly metabolized (caffeine) and sparingly soluble (naphthalene) compounds. Nonetheless, transient peaks of 13CO2 released in excess of background were found in glucose- and phenol-treated soil within 8 h. Cesium-chloride separation of 13C-labeled soil DNA was followed by PCR amplification and sequencing of 16S rRNA genes from microbial populations involved with 13C-substrate metabolism. A total of 29 full sequences revealed that active populations included relatives of Arthrobacter, Pseudomonas, Acinetobacter, Massilia, Flavobacterium, and Pedobacter spp. for glucose; Pseudomonas, Pantoea, Acinetobacter, Enterobacter, Stenotrophomonas, and Alcaligenes spp. for phenol; Pseudomonas, Acinetobacter, and Variovorax spp. for naphthalene; and Acinetobacter, Enterobacter, Stenotrophomonas, and Pantoea spp. for caffeine.

scholarly journals Palaeogeographic controls on climate and proxy interpretation

2016 ◽  
Vol 12 (5) ◽  
pp. 1181-1198 ◽  
Author(s):  
Daniel J. Lunt ◽  
Alex Farnsworth ◽  
Claire Loptson ◽  
Gavin L. Foster ◽  
Paul Markwick ◽  
...  
Keyword(s):  
Global Change ◽  
Carbon Cycle ◽  
Ocean Circulation ◽  
General Circulation ◽  
Regional Scale ◽  
Circulation Model ◽  
Adjustment Factor ◽  
Climate Signal ◽  
Proxy Records ◽  
Global Mean

Abstract. During the period from approximately 150 to 35 million years ago, the Cretaceous–Paleocene–Eocene (CPE), the Earth was in a “greenhouse” state with little or no ice at either pole. It was also a period of considerable global change, from the warmest periods of the mid-Cretaceous, to the threshold of icehouse conditions at the end of the Eocene. However, the relative contribution of palaeogeographic change, solar change, and carbon cycle change to these climatic variations is unknown. Here, making use of recent advances in computing power, and a set of unique palaeogeographic maps, we carry out an ensemble of 19 General Circulation Model simulations covering this period, one simulation per stratigraphic stage. By maintaining atmospheric CO2 concentration constant across the simulations, we are able to identify the contribution from palaeogeographic and solar forcing to global change across the CPE, and explore the underlying mechanisms. We find that global mean surface temperature is remarkably constant across the simulations, resulting from a cancellation of opposing trends from solar and palaeogeographic change. However, there are significant modelled variations on a regional scale. The stratigraphic stage–stage transitions which exhibit greatest climatic change are associated with transitions in the mode of ocean circulation, themselves often associated with changes in ocean gateways, and amplified by feedbacks related to emissivity and planetary albedo. We also find some control on global mean temperature from continental area and global mean orography. Our results have important implications for the interpretation of single-site palaeo proxy records. In particular, our results allow the non-CO2 (i.e. palaeogeographic and solar constant) components of proxy records to be removed, leaving a more global component associated with carbon cycle change. This “adjustment factor” is used to adjust sea surface temperatures, as the deep ocean is not fully equilibrated in the model. The adjustment factor is illustrated for seven key sites in the CPE, and applied to proxy data from Falkland Plateau, and we provide data so that similar adjustments can be made to any site and for any time period within the CPE. Ultimately, this will enable isolation of the CO2-forced climate signal to be extracted from multiple proxy records from around the globe, allowing an evaluation of the regional signals and extent of polar amplification in response to CO2 changes during the CPE. Finally, regions where the adjustment factor is constant throughout the CPE could indicate places where future proxies could be targeted in order to reconstruct the purest CO2-induced temperature change, where the complicating contributions of other processes are minimised. Therefore, combined with other considerations, this work could provide useful information for supporting targets for drilling localities and outcrop studies.

scholarly journals Different Molecular Characterization of Soil Particulate Fractions under N Deposition in a Subtropical Forest

Forests ◽  
2019 ◽  
Vol 10 (10) ◽  
pp. 914
Author(s):  
Jing Geng ◽  
Shulan Cheng ◽  
Huajun Fang ◽  
Jie Pei ◽  
Meng Xu ◽  
...  
Keyword(s):  
Organic Matter ◽  
Chemical Structure ◽  
Critical Role ◽  
N Deposition ◽  
Subtropical Forest ◽  
Gas Chromatography Mass Spectrometry ◽  
N Addition ◽  
Pyrolysis Gas ◽  
C Cycle ◽  
N Treatment

Key Findings: Combining physical fractionation and pyrolysis–gas chromatography/mass spectrometry (py-GC/MS) technique can help better understand the dynamics of soil organic matter (SOM). Background and Objectives: SOM plays a critical role in the global carbon (C) cycle. However, its complexity remains a challenge in characterizing chemical molecular composition within SOM and under nitrogen (N) deposition. Materials and Methods: Three particulate organic matter (POM) fractions within SOM and under N treatments were studied from perspectives of distributions, C contents and chemical signatures in a subtropical forest. N addition experiment was conducted with two inorganic N forms (NH4Cl and NaNO3) applied at three rates of 0, 40, 120 kg N ha−1 yr−1. Three particle-size fractions (>250 μm, 53–250 μm and <53 μm) were separated by a wet-sieving method. Py-GC/MS technique was used to differentiate between chemical composition. Results: A progressive proportion transfer of mineral-associated organic matter (MAOM) to fine POM under N treatment was found. Only C content in fine POM was sensitive to N addition. Principal component analyses (PCA) showed that the coarse POM had the largest plant-derived markers (lignins, phenols, long-chain n-alkanes, and n-alkenes). Short-chain n-alkanes and n-alkenes, benzofurans, aromatics and polycyclic aromatic hydrocarbons mainly from black carbon prevailed in the fine POM. N compounds and polysaccharides from microbial products dominated in the MAOM. Factor analysis revealed that the degradation extent of three fractions was largely distinct. The difference in chemical structure among three particulate fractions within SOM was larger than treatments between control and N addition. In terms of N treatment impact, the MAOM fraction had fewer benzofurans compounds and was enriched in polysaccharides, indicating comparatively weaker mineralization and stronger stabilization of these substances. Conclusions: Our findings highlight the importance of chemical structure in SOM pools and help to understand the influence of N deposition on SOM transformation.

scholarly journals Molecular, Radioactive and Stable Carbon Isotope Characterization of Estuarine Particulate Organic Matter

Radiocarbon ◽  
1997 ◽  
Vol 40 (2) ◽  
pp. 985-990 ◽  
Author(s):  
Luc Megens ◽  
Johannes Van Der Plicht ◽  
Jan W. De Leeuw
Keyword(s):  
Organic Matter ◽  
Carbon Isotope ◽  
Suspended Matter ◽  
Stable Carbon Isotope ◽  
Complex Mixture ◽  
Total Carbon ◽  
Gas Chromatography Mass Spectrometry ◽  
Pyrolysis Gas ◽  
C Value ◽  
Final Residue

Organic matter in sediments and suspended matter is a complex mixture of constituents with different histories, sources and stabilities. To study these components in a suspended matter sample from the Ems-Dollard Estuary, we used combined molecular analysis with pyrolysis/gas chromatography/mass spectrometry and stable and radioactive carbon isotope analyses of the bulk and separated chemical fractions. Carbohydrates and proteins, ca. 50% of the total organic carbon (TOC), are much younger than the bulk sample and have a somewhat higher δ13C value. Lipids and the final residue are considerably older and have lower δ13C values. The final residue, ca. 17% of the total carbon, consists mainly of aliphatic macromolecules that could be derived from algae or terrestrial plants. The δ13C value points to a marine origin.

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